RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 DPP3Q9NY33 737 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 STK17AQ9UEE5 414 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 CLIC4Q9Y696 253 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 NCANO14594 1321 aa21.29■■□□□ 1
TNFRSF1B-204ENST00000536782 SOAT2O75908 522 aa21.28■■□□□ 1
TNFRSF1B-204ENST00000536782 TAF6P49848 677 aa21.28■■□□□ 1
TNFRSF1B-204ENST00000536782 MLLT6P55198 1093 aaPredicted RBP21.28■■□□□ 1
TNFRSF1B-204ENST00000536782 PTPAQ15257 358 aa21.28■■□□□ 1
TNFRSF1B-204ENST00000536782 SLC39A12Q504Y0 691 aa21.28■■□□□ 1
TNFRSF1B-204ENST00000536782 CSGALNACT1Q8TDX6 532 aa21.28■■□□□ 1
TNFRSF1B-204ENST00000536782 POMGNT1Q8WZA1 660 aa21.28■■□□□ 1
TNFRSF1B-204ENST00000536782 IER2Q9BTL4 223 aa21.28■■□□□ 1
TNFRSF1B-204ENST00000536782 FAM126AQ9BYI3 521 aaPredicted RBP21.28■■□□□ 1
TNFRSF1B-204ENST00000536782 ZCWPW1Q9H0M4 648 aa21.28■■□□□ 1
TNFRSF1B-204ENST00000536782 ATXN3LQ9H3M9 355 aa21.28■■□□□ 1
TNFRSF1B-204ENST00000536782 LMAN1LQ9HAT1 526 aa21.28■■□□□ 1
TNFRSF1B-204ENST00000536782 ARNTLO00327 626 aa21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 CYB561D2O14569 222 aa21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 CHADO15335 359 aa21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 LILRB5O75023 590 aa21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 TUFMP49411 452 aaKnown RBP21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 FCHO2Q0JRZ9 810 aa21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 CUL4AQ13619 759 aa21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 POSTNQ15063 836 aa21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 ARHGAP15Q53QZ3 475 aa21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 STXBP5Q5T5C0 1151 aa21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 MAMSTRQ6ZN01 415 aa21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 GAREM2Q75VX8 874 aa21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 ARID3BQ8IVW6 561 aaPredicted RBP21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 THEM5Q8N1Q8 247 aa21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 FAM200AQ8TCP9 573 aa21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 RSPRY1Q96DX4 576 aa21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 SEPT5Q99719 369 aaPredicted RBP21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 PYM1Q9BRP8 204 aaKnown RBP21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 NCDNQ9UBB6 729 aa21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 SEL1LQ9UBV2 794 aa21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 FBXO2Q9UK22 296 aaPredicted RBP21.27■■□□□ 1
TNFRSF1B-204ENST00000536782 DPYSL4O14531 572 aa21.26■□□□□ 0.99
TNFRSF1B-204ENST00000536782 CCNE1P24864 410 aa21.26■□□□□ 0.99
TNFRSF1B-204ENST00000536782 GABRR2P28476 465 aa21.26■□□□□ 0.99
TNFRSF1B-204ENST00000536782 TXLNAP40222 546 aa21.26■□□□□ 0.99
TNFRSF1B-204ENST00000536782 PPP2R5DQ14738 602 aa21.26■□□□□ 0.99
TNFRSF1B-204ENST00000536782 VEPH1Q14D04 833 aa21.26■□□□□ 0.99
TNFRSF1B-204ENST00000536782 MGAT5BQ3V5L5 792 aa21.26■□□□□ 0.99
TNFRSF1B-204ENST00000536782 RRAGBQ5VZM2 374 aa21.26■□□□□ 0.99
TNFRSF1B-204ENST00000536782 C1orf228Q6PIY5 440 aa21.26■□□□□ 0.99
TNFRSF1B-204ENST00000536782 CRELD2Q6UXH1 353 aaPredicted RBP21.26■□□□□ 0.99
TNFRSF1B-204ENST00000536782 SV2BQ7L1I2 683 aa21.26■□□□□ 0.99
TNFRSF1B-204ENST00000536782 GPIHBP1Q8IV16 184 aa21.26■□□□□ 0.99
TNFRSF1B-204ENST00000536782 MSANTD3Q96H12 275 aa21.26■□□□□ 0.99
TNFRSF1B-204ENST00000536782 EPC1Q9H2F5 836 aa21.26■□□□□ 0.99
TNFRSF1B-204ENST00000536782 IKZF4Q9H2S9 585 aa21.26■□□□□ 0.99
TNFRSF1B-204ENST00000536782 MRPL44Q9H9J2 332 aaKnown RBP21.26■□□□□ 0.99
TNFRSF1B-204ENST00000536782 EXOC7Q9UPT5 735 aa21.26■□□□□ 0.99
TNFRSF1B-204ENST00000536782 SRPRBQ9Y5M8 271 aaKnown RBP21.26■□□□□ 0.99
TNFRSF1B-204ENST00000536782 TPRP12270 2363 aaKnown RBP21.25■□□□□ 0.99
TNFRSF1B-204ENST00000536782 PPP1R37O75864 691 aa21.25■□□□□ 0.99
TNFRSF1B-204ENST00000536782 IL18RAPO95256 599 aa21.25■□□□□ 0.99
TNFRSF1B-204ENST00000536782 GAP43P17677 238 aa21.25■□□□□ 0.99
TNFRSF1B-204ENST00000536782 ADSSP30520 456 aa21.25■□□□□ 0.99
TNFRSF1B-204ENST00000536782 KPNA1P52294 538 aaPredicted RBP21.25■□□□□ 0.99
TNFRSF1B-204ENST00000536782 NRLP54845 237 aa21.25■□□□□ 0.99
TNFRSF1B-204ENST00000536782 SMARCB1Q12824 385 aa21.25■□□□□ 0.99
TNFRSF1B-204ENST00000536782 GPR158Q5T848 1215 aa21.25■□□□□ 0.99
TNFRSF1B-204ENST00000536782 NT5DC4Q86YG4 428 aa21.25■□□□□ 0.99
TNFRSF1B-204ENST00000536782 C2orf15Q8WU43 125 aaKnown RBP21.25■□□□□ 0.99
TNFRSF1B-204ENST00000536782 SECISBP2LQ93073 1101 aaKnown RBP21.25■□□□□ 0.99
TNFRSF1B-204ENST00000536782 LPIN3Q9BQK8 851 aa21.25■□□□□ 0.99
TNFRSF1B-204ENST00000536782 MKNK1Q9BUB5 465 aa21.25■□□□□ 0.99
TNFRSF1B-204ENST00000536782 STRA6Q9BX79 667 aa21.25■□□□□ 0.99
TNFRSF1B-204ENST00000536782 C8orf33Q9H7E9 229 aaPredicted RBP21.25■□□□□ 0.99
TNFRSF1B-204ENST00000536782 SCN1AP35498 2009 aa21.24■□□□□ 0.99
TNFRSF1B-204ENST00000536782 MYMKA6NI61 221 aa21.24■□□□□ 0.99
TNFRSF1B-204ENST00000536782 KPNA7A9QM74 516 aa21.24■□□□□ 0.99
TNFRSF1B-204ENST00000536782 CHRNB1P11230 501 aa21.24■□□□□ 0.99
TNFRSF1B-204ENST00000536782 ATF6P18850 670 aa21.24■□□□□ 0.99
TNFRSF1B-204ENST00000536782 CCR3P51677 355 aa21.24■□□□□ 0.99
TNFRSF1B-204ENST00000536782 TAF12Q16514 161 aa21.24■□□□□ 0.99
TNFRSF1B-204ENST00000536782 SV2CQ496J9 727 aa21.24■□□□□ 0.99
TNFRSF1B-204ENST00000536782 WSCD1Q658N2 575 aa21.24■□□□□ 0.99
TNFRSF1B-204ENST00000536782 EFCAB13Q8IY85 973 aa21.24■□□□□ 0.99
TNFRSF1B-204ENST00000536782 SPPL2BQ8TCT7 592 aa21.24■□□□□ 0.99
TNFRSF1B-204ENST00000536782 CLIC6Q96NY7 704 aa21.24■□□□□ 0.99
TNFRSF1B-204ENST00000536782 ACCSQ96QU6 501 aa21.24■□□□□ 0.99
TNFRSF1B-204ENST00000536782 OBP2AQ9NY56 170 aa21.24■□□□□ 0.99
TNFRSF1B-204ENST00000536782 TBC1D7Q9P0N9 293 aa21.24■□□□□ 0.99
TNFRSF1B-204ENST00000536782 SMG5Q9UPR3 1016 aaKnown RBP21.24■□□□□ 0.99
TNFRSF1B-204ENST00000536782 TSC2P49815 1807 aa21.24■□□□□ 0.99
TNFRSF1B-204ENST00000536782 SLC38A8A6NNN8 435 aa21.23■□□□□ 0.99
TNFRSF1B-204ENST00000536782 CDC25CP30307 473 aa21.23■□□□□ 0.99
TNFRSF1B-204ENST00000536782 CDR1P51861 262 aa21.23■□□□□ 0.99
TNFRSF1B-204ENST00000536782 CEBPZQ03701 1054 aaKnown RBP21.23■□□□□ 0.99
TNFRSF1B-204ENST00000536782 KCNA1Q09470 495 aa21.23■□□□□ 0.99
TNFRSF1B-204ENST00000536782 LRRC32Q14392 662 aa21.23■□□□□ 0.99
TNFRSF1B-204ENST00000536782 ARHGAP29Q52LW3 1261 aa21.23■□□□□ 0.99
TNFRSF1B-204ENST00000536782 L1TD1Q5T7N2 865 aaKnown RBP21.23■□□□□ 0.99
TNFRSF1B-204ENST00000536782 DCP1BQ8IZD4 617 aaKnown RBP21.23■□□□□ 0.99
TNFRSF1B-204ENST00000536782 DNAJC19Q96DA6 116 aa21.23■□□□□ 0.99
TNFRSF1B-204ENST00000536782 ZNF560Q96MR9 790 aa21.23■□□□□ 0.99
TNFRSF1B-204ENST00000536782 GCNAQ96QF7 691 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms