RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ODF1Q14990 250 aa6.99□□□□□ -1.29
CLIP1-207ENST00000536634 PTPN21Q16825 1174 aa6.99□□□□□ -1.29
CLIP1-207ENST00000536634 BRDTQ58F21 947 aaPredicted RBP6.99□□□□□ -1.29
CLIP1-207ENST00000536634 GJC2Q5T442 439 aaPredicted RBP6.99□□□□□ -1.29
CLIP1-207ENST00000536634 AFMIDQ63HM1 303 aa6.99□□□□□ -1.29
CLIP1-207ENST00000536634 DRICH1Q6PGQ1 229 aaPredicted RBP6.99□□□□□ -1.29
CLIP1-207ENST00000536634 ZGPATQ8N5A5 531 aaKnown RBP6.99□□□□□ -1.29
CLIP1-207ENST00000536634 CCHCR1Q8TD31 782 aa6.99□□□□□ -1.29
CLIP1-207ENST00000536634 RAPGEF4Q8WZA2 1011 aa6.99□□□□□ -1.29
CLIP1-207ENST00000536634 BRINP2Q9C0B6 783 aa6.99□□□□□ -1.29
CLIP1-207ENST00000536634 MMRN2Q9H8L6 949 aa6.99□□□□□ -1.29
CLIP1-207ENST00000536634 GPRC5BQ9NZH0 403 aa6.99□□□□□ -1.29
CLIP1-207ENST00000536634 EIF2B4Q9UI10 523 aaKnown RBP6.99□□□□□ -1.29
CLIP1-207ENST00000536634 ASAP1Q9ULH1 1129 aa6.99□□□□□ -1.29
CLIP1-207ENST00000536634 MYH14Q7Z406 1995 aaKnown RBP6.99□□□□□ -1.29
CLIP1-207ENST00000536634 COL5A3P25940 1745 aaPredicted RBP6.98□□□□□ -1.29
CLIP1-207ENST00000536634 FAM171A2A8MVW0 826 aa6.98□□□□□ -1.29
CLIP1-207ENST00000536634 AHRRA9YTQ3 701 aa6.98□□□□□ -1.29
CLIP1-207ENST00000536634 TRIM24O15164 1050 aa6.98□□□□□ -1.29
CLIP1-207ENST00000536634 AMY1AP04745 511 aa6.98□□□□□ -1.29
CLIP1-207ENST00000536634 RAP2AP10114 183 aa6.98□□□□□ -1.29
CLIP1-207ENST00000536634 ZFP36P26651 326 aaKnown RBP6.98□□□□□ -1.29
CLIP1-207ENST00000536634 RAP2BP61225 183 aa6.98□□□□□ -1.29
CLIP1-207ENST00000536634 FAM189BP81408 668 aa6.98□□□□□ -1.29
CLIP1-207ENST00000536634 NHLH2Q02577 135 aa6.98□□□□□ -1.29
CLIP1-207ENST00000536634 EFCAB12Q6NXP0 572 aa6.98□□□□□ -1.29
CLIP1-207ENST00000536634 ZNF483Q8TF39 744 aaPredicted RBP6.98□□□□□ -1.29
CLIP1-207ENST00000536634 RAB24Q969Q5 203 aa6.98□□□□□ -1.29
CLIP1-207ENST00000536634 COG3Q96JB2 828 aa6.98□□□□□ -1.29
CLIP1-207ENST00000536634 TEX101Q9BY14 249 aa6.98□□□□□ -1.29
CLIP1-207ENST00000536634 HOMER2Q9NSB8 354 aa6.98□□□□□ -1.29
CLIP1-207ENST00000536634 NOP58Q9Y2X3 529 aaKnown RBP6.98□□□□□ -1.29
CLIP1-207ENST00000536634 ACTL7AQ9Y615 435 aa6.98□□□□□ -1.29
CLIP1-207ENST00000536634 TIAM2Q8IVF5 1701 aa6.98□□□□□ -1.29
CLIP1-207ENST00000536634 KDRP35968 1356 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 FOXN1O15353 648 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 KDM6AO15550 1401 aaPredicted RBP6.97□□□□□ -1.29
CLIP1-207ENST00000536634 PJA2O43164 708 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 GYS1P13807 737 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 WASP42768 502 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 GDF5P43026 501 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 CLRN1P58418 232 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 RNASE9P60153 205 aaKnown RBP6.97□□□□□ -1.29
CLIP1-207ENST00000536634 KRT85P78386 507 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 TMF1P82094 1093 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 KLF10Q13118 480 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 CCDC88AQ3V6T2 1871 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 HSP90AB2PQ58FF8 381 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 METRNLQ641Q3 311 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 ZNF276Q8N554 614 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 SLC25A43Q8WUT9 341 aaPredicted RBP6.97□□□□□ -1.29
CLIP1-207ENST00000536634 NEU1Q99519 415 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 MRI1Q9BV20 369 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 SLC23A1Q9UHI7 598 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 SERPINB13Q9UIV8 391 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 ING1Q9UK53 422 aaPredicted RBP6.97□□□□□ -1.29
CLIP1-207ENST00000536634 CLCA2Q9UQC9 943 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 REXO2Q9Y3B8 237 aaKnown RBP6.97□□□□□ -1.29
CLIP1-207ENST00000536634 CHST2Q9Y4C5 530 aa6.97□□□□□ -1.29
CLIP1-207ENST00000536634 NCAPD2Q15021 1401 aa6.96□□□□□ -1.3
CLIP1-207ENST00000536634 SMG6Q86US8 1419 aaKnown RBP6.96□□□□□ -1.3
CLIP1-207ENST00000536634 PEX11BO96011 259 aa6.96□□□□□ -1.3
CLIP1-207ENST00000536634 SNRPA1P09661 255 aaKnown RBP6.96□□□□□ -1.3
CLIP1-207ENST00000536634 EDNRBP24530 442 aa6.96□□□□□ -1.3
CLIP1-207ENST00000536634 HMGB2P26583 209 aaKnown RBP6.96□□□□□ -1.3
CLIP1-207ENST00000536634 CHRNA5P30532 468 aa6.96□□□□□ -1.3
CLIP1-207ENST00000536634 MTM1Q13496 603 aa6.96□□□□□ -1.3
CLIP1-207ENST00000536634 ATXN7L2Q5T6C5 722 aaPredicted RBP6.96□□□□□ -1.3
CLIP1-207ENST00000536634 PNMA8AQ86V59 439 aaPredicted RBP6.96□□□□□ -1.3
CLIP1-207ENST00000536634 ZFPM1Q8IX07 1006 aa6.96□□□□□ -1.3
CLIP1-207ENST00000536634 ZFP28Q8NHY6 868 aa6.96□□□□□ -1.3
CLIP1-207ENST00000536634 CLIP3Q96DZ5 547 aa6.96□□□□□ -1.3
CLIP1-207ENST00000536634 MYOCQ99972 504 aa6.96□□□□□ -1.3
CLIP1-207ENST00000536634 C7orf25Q9BPX7 421 aa6.96□□□□□ -1.3
CLIP1-207ENST00000536634 TMEM140Q9NV12 185 aa6.96□□□□□ -1.3
CLIP1-207ENST00000536634 TERF2IPQ9NYB0 399 aa6.96□□□□□ -1.3
CLIP1-207ENST00000536634 MOCS1Q9NZB8 636 aa6.96□□□□□ -1.3
CLIP1-207ENST00000536634 TRPM5Q9NZQ8 1165 aa6.96□□□□□ -1.3
CLIP1-207ENST00000536634 LIMCH1Q9UPQ0 1083 aa6.96□□□□□ -1.3
CLIP1-207ENST00000536634 MRFAP1Q9Y605 127 aa6.96□□□□□ -1.3
CLIP1-207ENST00000536634 INSRP06213 1382 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 PDE4DIPQ5VU43 2346 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 DRGXA6NNA5 263 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 ZNF185O15231 689 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 GPR32O75388 356 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 RECQL4O94761 1208 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 SLPIP03973 132 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 ZSCAN20P17040 1043 aaPredicted RBP6.95□□□□□ -1.3
CLIP1-207ENST00000536634 ATP5JP18859 108 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 IBSPP21815 317 aaPredicted RBP6.95□□□□□ -1.3
CLIP1-207ENST00000536634 CHN2P52757 468 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 ATP8B2P98198 1209 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 KIF23Q02241 960 aaPredicted RBP6.95□□□□□ -1.3
CLIP1-207ENST00000536634 DDR1Q08345 913 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 ABHD18Q0P651 414 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 C3orf36Q3SXR2 165 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 RRP12Q5JTH9 1297 aaKnown RBP6.95□□□□□ -1.3
CLIP1-207ENST00000536634 GDF7Q7Z4P5 450 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 RHOT1Q8IXI2 618 aa6.95□□□□□ -1.3
CLIP1-207ENST00000536634 CASKIN2Q8WXE0 1202 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms