RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 EIF4BP23588 611 aaKnown RBP8.72□□□□□ -1.01
ABCA4-207ENST00000536513 RRM1P23921 792 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 EDNRBP24530 442 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 KCNJ6P48051 423 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 CCDC6Q16204 474 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 PTGISQ16647 500 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 KRT71Q3SY84 523 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 HP1BP3Q5SSJ5 553 aaPredicted RBP8.72□□□□□ -1.01
ABCA4-207ENST00000536513 IRF2BP2Q7Z5L9 587 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 FAM167BQ9BTA0 163 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 ANKZF1Q9H8Y5 726 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 MAGED2Q9UNF1 606 aaPredicted RBP8.72□□□□□ -1.01
ABCA4-207ENST00000536513 GOLGA4Q13439 2230 aaKnown RBP8.72□□□□□ -1.01
ABCA4-207ENST00000536513 A0A0C4DFX4 3053 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 NT5C1B-RDH14C9J2C7 533 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 CREB3O43889 395 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 STBD1O95210 358 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 LYPLA2O95372 231 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 FGGP02679 453 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 MLH1P40692 756 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 AFF1P51825 1210 aaKnown RBP8.72□□□□□ -1.01
ABCA4-207ENST00000536513 PTENP60484 403 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 HGSNATQ68CP4 663 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 GSTA5Q7RTV2 222 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 ZNF784Q8NCA9 323 aaPredicted RBP8.72□□□□□ -1.01
ABCA4-207ENST00000536513 SHCBP1Q8NEM2 672 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 ARMC2Q8NEN0 867 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 LNX1Q8TBB1 728 aaPredicted RBP8.72□□□□□ -1.01
ABCA4-207ENST00000536513 MKNK1Q9BUB5 465 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 TSGA10Q9BZW7 698 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 TTYH3Q9C0H2 523 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 NGRNQ9NPE2 291 aaKnown RBP8.72□□□□□ -1.01
ABCA4-207ENST00000536513 CREBZFQ9NS37 354 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 CISHQ9NSE2 258 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 PRMT7Q9NVM4 692 aaPredicted RBP8.72□□□□□ -1.01
ABCA4-207ENST00000536513 TUBGCP4Q9UGJ1 667 aa8.72□□□□□ -1.01
ABCA4-207ENST00000536513 MSCO60682 206 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 SLC10A3P09131 477 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 LCP1P13796 627 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 NR1D1P20393 614 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 ZKSCAN8Q15776 578 aaPredicted RBP8.71□□□□□ -1.01
ABCA4-207ENST00000536513 ZNF484Q5JVG2 852 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 GKAP1Q5VSY0 366 aaPredicted RBP8.71□□□□□ -1.01
ABCA4-207ENST00000536513 DSTYKQ6XUX3 929 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 TBC1D1Q86TI0 1168 aaPredicted RBP8.71□□□□□ -1.01
ABCA4-207ENST00000536513 SUGP1Q8IWZ8 645 aaKnown RBP8.71□□□□□ -1.01
ABCA4-207ENST00000536513 CCDC63Q8NA47 563 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 STKLD1Q8NE28 680 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 PAIP2Q9BPZ3 127 aaKnown RBP8.71□□□□□ -1.01
ABCA4-207ENST00000536513 APOBEC3GQ9HC16 384 aaKnown RBP8.71□□□□□ -1.01
ABCA4-207ENST00000536513 STARD7Q9NQZ5 370 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 TPX2Q9ULW0 747 aaKnown RBP8.71□□□□□ -1.01
ABCA4-207ENST00000536513 DIS3Q9Y2L1 958 aaKnown RBP8.71□□□□□ -1.01
ABCA4-207ENST00000536513 CDY2AQ9Y6F7 541 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 A0A0B4J269 797 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 KIF3CO14782 793 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 SMIM24O75264 130 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 B3GAT3O94766 335 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 KCNJ1P48048 391 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 MCCD1P59942 119 aaPredicted RBP8.71□□□□□ -1.01
ABCA4-207ENST00000536513 PAK2Q13177 524 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 CUL2Q13617 745 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 BMT2Q1RMZ1 405 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 PLPPR4Q7Z2D5 763 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 RSPH3Q86UC2 560 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 DDX42Q86XP3 938 aaKnown RBP eCLIP8.71□□□□□ -1.01
ABCA4-207ENST00000536513 SAMD3Q8N6K7 520 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 SLC17A8Q8NDX2 589 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 RPGRIP1Q96KN7 1286 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 ADAM33Q9BZ11 813 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 C17orf75Q9HAS0 396 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 EPB41L5Q9HCM4 733 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 SIX2Q9NPC8 291 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 DPP3Q9NY33 737 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 HPCAL4Q9UM19 191 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 TTLL3Q9Y4R7 772 aa8.71□□□□□ -1.01
ABCA4-207ENST00000536513 EIF3HO15372 352 aaKnown RBP eCLIP8.71□□□□□ -1.02
ABCA4-207ENST00000536513 PPP1R37O75864 691 aa8.71□□□□□ -1.02
ABCA4-207ENST00000536513 MARCKSL1P49006 195 aa8.71□□□□□ -1.02
ABCA4-207ENST00000536513 FAM133BQ5BKY9 247 aaKnown RBP8.71□□□□□ -1.02
ABCA4-207ENST00000536513 C17orf99Q6UX52 265 aa8.71□□□□□ -1.02
ABCA4-207ENST00000536513 SPATS2Q86XZ4 545 aaKnown RBP8.71□□□□□ -1.02
ABCA4-207ENST00000536513 ABI1Q8IZP0 508 aa8.71□□□□□ -1.02
ABCA4-207ENST00000536513 CXorf38Q8TB03 319 aa8.71□□□□□ -1.02
ABCA4-207ENST00000536513 OSBPL9Q96SU4 736 aa8.71□□□□□ -1.02
ABCA4-207ENST00000536513 PCDHB18PQ96TA0 734 aa8.71□□□□□ -1.02
ABCA4-207ENST00000536513 CALN1Q9BXU9 219 aa8.71□□□□□ -1.02
ABCA4-207ENST00000536513 OSBPL7Q9BZF2 842 aa8.71□□□□□ -1.02
ABCA4-207ENST00000536513 IFT122Q9HBG6 1241 aa8.71□□□□□ -1.02
ABCA4-207ENST00000536513 TJP2Q9UDY2 1190 aa8.71□□□□□ -1.02
ABCA4-207ENST00000536513 HMGXB4Q9UGU5 601 aa8.71□□□□□ -1.02
ABCA4-207ENST00000536513 KIAA1217Q5T5P2 1943 aa8.71□□□□□ -1.02
ABCA4-207ENST00000536513 MUTP22033 750 aa8.7□□□□□ -1.02
ABCA4-207ENST00000536513 GARTP22102 1010 aa8.7□□□□□ -1.02
ABCA4-207ENST00000536513 CTNNA1P35221 906 aaKnown RBP8.7□□□□□ -1.02
ABCA4-207ENST00000536513 MTFR1Q15390 333 aa8.7□□□□□ -1.02
ABCA4-207ENST00000536513 PPP6R3Q5H9R7 873 aaPredicted RBP8.7□□□□□ -1.02
ABCA4-207ENST00000536513 TMCO2Q7Z6W1 182 aaPredicted RBP8.7□□□□□ -1.02
ABCA4-207ENST00000536513 ERICH1Q86X53 443 aa8.7□□□□□ -1.02
ABCA4-207ENST00000536513 ZNF564Q8TBZ8 553 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms