RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 SLC17A7Q9P2U7 560 aa7.31□□□□□ -1.24
CPSF7-215ENST00000536145 PSMC3IPQ9P2W1 217 aaPredicted RBP7.31□□□□□ -1.24
CPSF7-215ENST00000536145 DRG1Q9Y295 367 aaKnown RBP7.31□□□□□ -1.24
CPSF7-215ENST00000536145 SSX2IPQ9Y2D8 614 aa7.31□□□□□ -1.24
CPSF7-215ENST00000536145 ZNF510Q9Y2H8 683 aa7.31□□□□□ -1.24
CPSF7-215ENST00000536145 PPME1Q9Y570 386 aa7.31□□□□□ -1.24
CPSF7-215ENST00000536145 MYPNQ86TC9 1320 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 SMIM31A0A1B0GVY4 71 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 DENND3A2RUS2 1198 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 CFAP69A5D8W1 941 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 E7ESA3 106 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 POC1B-GALNT4F8VUJ3 575 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 PSTPIP1O43586 416 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 FKBP6O75344 327 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 TM7SF2O76062 418 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 ADRB2P07550 413 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 ITGA2BP08514 1039 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 BMP3P12645 472 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 PLS3P13797 630 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 SERPINB3P29508 390 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 MAPK4P31152 587 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 PTPN7P35236 360 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 PGM1P36871 562 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 VPS41P49754 854 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 GPC3P51654 580 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 SH3BGRP55822 239 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-215ENST00000536145 GEMIN4P57678 1058 aaKnown RBP7.3□□□□□ -1.24
CPSF7-215ENST00000536145 XIAPP98170 497 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 CYP4A11Q02928 519 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 SULT2A1Q06520 285 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 PPP2R5CQ13362 524 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 TTLL12Q14166 644 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-215ENST00000536145 MORF4L2Q15014 288 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 P3H1Q32P28 736 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 MEX3CQ5U5Q3 659 aaKnown RBP7.3□□□□□ -1.24
CPSF7-215ENST00000536145 SAMD1Q6SPF0 538 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-215ENST00000536145 IZUMO2Q6UXV1 221 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 RIPOR1Q6ZS17 1223 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 STXBP4Q6ZWJ1 553 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 ZNF365Q70YC5 407 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 OTOP1Q7RTM1 612 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 LRRC6Q86X45 466 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 TMPRSS6Q8IU80 811 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 VPS52Q8N1B4 723 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 ALLCQ8N6M5 410 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 EXD1Q8NHP7 514 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 CCDC110Q8TBZ0 833 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 TCP10LQ8TDR4 215 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 DCAF4Q8WV16 495 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 NKD2Q969F2 451 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-215ENST00000536145 FNBP1Q96RU3 617 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 CENPKQ9BS16 269 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 WDR18Q9BV38 432 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 TRIM55Q9BYV6 548 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 MIS12Q9H081 205 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 ST6GALNAC4Q9H4F1 302 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 MANSC1Q9H8J5 431 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 ACP6Q9NPH0 428 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 NDUFA13Q9P0J0 144 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 WRAP73Q9P2S5 460 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-215ENST00000536145 CIDEBQ9UHD4 219 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 STRIP2Q9ULQ0 834 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 SHOC2Q9UQ13 582 aa7.3□□□□□ -1.24
CPSF7-215ENST00000536145 FARP1Q9Y4F1 1045 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-215ENST00000536145 E5RJQ4 531 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 CASQ2O14958 399 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-215ENST00000536145 ZNF862O60290 1169 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 C1QAP02745 245 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 ATP5BP06576 529 aaKnown RBP7.29□□□□□ -1.24
CPSF7-215ENST00000536145 ZSCAN5DPP0CG00 497 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 ZCCHC18P0CG32 403 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 CCDC166P0CW27 439 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 ESRRAP11474 423 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-215ENST00000536145 KRT15P19012 456 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 GCLMP48507 274 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 MFAP3P55082 362 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 USP46P62068 366 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 SNRPFP62306 86 aaKnown RBP7.29□□□□□ -1.24
CPSF7-215ENST00000536145 DSG1Q02413 1049 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 CREB5Q02930 508 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 BTKQ06187 659 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 ENPEPQ07075 957 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 TBL3Q12788 808 aaKnown RBP7.29□□□□□ -1.24
CPSF7-215ENST00000536145 OVGP1Q12889 678 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 USP4Q13107 963 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 ALCAMQ13740 583 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 EFTUD2Q15029 972 aaKnown RBP eCLIP7.29□□□□□ -1.241e-7■■■■■ 43.9
CPSF7-215ENST00000536145 LLGL1Q15334 1064 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 OASLQ15646 514 aaKnown RBP7.29□□□□□ -1.24
CPSF7-215ENST00000536145 EAPPQ56P03 285 aaPredicted RBP7.29□□□□□ -1.24
CPSF7-215ENST00000536145 SFT2D3Q587I9 215 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 ARMC3Q5W041 872 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 CIAPIN1Q6FI81 312 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 UGT2A3Q6UWM9 527 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 KCTD1Q719H9 257 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 MON1BQ7L1V2 547 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 PHLDB2Q86SQ0 1253 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 TTC7BQ86TV6 843 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 NLRX1Q86UT6 975 aa7.29□□□□□ -1.24
CPSF7-215ENST00000536145 SCUBE1Q8IWY4 988 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms