RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 SUSD6Q92537 303 aa4.74□□□□□ -1.65
YBX3-205ENST00000536107 IL17RAQ96F46 866 aa4.74□□□□□ -1.65
YBX3-205ENST00000536107 NT5C1AQ9BXI3 368 aa4.74□□□□□ -1.65
YBX3-205ENST00000536107 IFIH1Q9BYX4 1025 aaKnown RBP4.74□□□□□ -1.65
YBX3-205ENST00000536107 RAI14Q9P0K7 980 aa4.74□□□□□ -1.65
YBX3-205ENST00000536107 RAB23Q9ULC3 237 aa4.74□□□□□ -1.65
YBX3-205ENST00000536107 USP9XQ93008 2570 aaPredicted RBP4.73□□□□□ -1.65
YBX3-205ENST00000536107 CEP295Q9C0D2 2601 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 GRM8O00222 908 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 CXCL10P02778 98 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 MMP1P03956 469 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 NCLP19338 710 aaKnown RBP4.73□□□□□ -1.65
YBX3-205ENST00000536107 FGFR2P21802 821 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 TECP42680 631 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 PHKA1P46020 1223 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 CPT1AP50416 773 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 PLCD1P51178 756 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 IQSEC1Q6DN90 963 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 CES5AQ6NT32 575 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 NFRKBQ6P4R8 1299 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 EEPD1Q7L9B9 569 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 MAGEB6Q8N7X4 407 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 VGLL2Q8N8G2 317 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 TDRD5Q8NAT2 981 aaKnown RBP4.73□□□□□ -1.65
YBX3-205ENST00000536107 KLHDC4Q8TBB5 520 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 ZNF483Q8TF39 744 aaPredicted RBP4.73□□□□□ -1.65
YBX3-205ENST00000536107 AJUBAQ96IF1 538 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 KLHL25Q9H0H3 589 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 GBP3Q9H0R5 595 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 GPR108Q9NPR9 543 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 AATFQ9NY61 560 aaKnown RBP eCLIP4.73□□□□□ -1.65
YBX3-205ENST00000536107 VTI1BQ9UEU0 232 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 CGGBP1Q9UFW8 167 aaPredicted RBP4.73□□□□□ -1.65
YBX3-205ENST00000536107 WASF3Q9UPY6 502 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 SMCHD1A6NHR9 2005 aa4.73□□□□□ -1.65
YBX3-205ENST00000536107 ZNF236Q9UL36 1845 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 OTOGLQ3ZCN5 2332 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 C5orf67F2Z3F1 127 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 VWA5AO00534 786 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 WDR46O15213 610 aaKnown RBP4.72□□□□□ -1.65
YBX3-205ENST00000536107 ARHGAP6O43182 974 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 TBC1D4O60343 1298 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 RAMP2O60895 175 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 GLP2RO95838 553 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 CKBP12277 381 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 ACRV1P26436 265 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 CSTF1Q05048 431 aaKnown RBP4.72□□□□□ -1.65
YBX3-205ENST00000536107 TDGQ13569 410 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 BTG3Q14201 252 aaPredicted RBP4.72□□□□□ -1.65
YBX3-205ENST00000536107 GPNMBQ14956 572 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 SEPT2Q15019 361 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 LPAL2Q16609 132 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 ATP2B3Q16720 1220 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 TMEM63BQ5T3F8 832 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 SNRNP48Q6IEG0 339 aaKnown RBP4.72□□□□□ -1.65
YBX3-205ENST00000536107 ZNF627Q7L945 461 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 POLNQ7Z5Q5 900 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 CCDC146Q8IYE0 955 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 CPXCR1Q8N123 301 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 Q8N1Y9 231 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 ARHGEF39Q8N4T4 335 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 FAM133AQ8N9E0 248 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 DBF4BQ8NFT6 615 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 OR6J1Q8NGC5 347 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 SPATA18Q8TC71 538 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 TOP1MTQ969P6 601 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 NEIL1Q96FI4 390 aaPredicted RBP4.72□□□□□ -1.65
YBX3-205ENST00000536107 TEX13BQ9BXU2 312 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 PDGFCQ9NRA1 345 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 CA14Q9ULX7 337 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 Q9Y3F1 56 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 PCDHGA2Q9Y5H1 932 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 SLC30A1Q9Y6M5 507 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 X6R8D5 127 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 HELZ2Q9BYK8 2649 aaKnown RBP4.72□□□□□ -1.65
YBX3-205ENST00000536107 FLT1P17948 1338 aa4.72□□□□□ -1.65
YBX3-205ENST00000536107 A0A1W2PRG0 241 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 FSD2A1L4K1 749 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 ASB14A6NK59 587 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 KPNA6O60684 536 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 KRT38O76015 456 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 LRG1P02750 347 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 CHGBP05060 677 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 MMP3P08254 477 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 PLS3P13797 630 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 GUCY2CP25092 1073 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 CSF2RBP32927 897 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 GNAI1P63096 354 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 COL10A1Q03692 680 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 COL28A1Q2UY09 1125 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 AASDHQ4L235 1098 aaPredicted RBP4.71□□□□□ -1.66
YBX3-205ENST00000536107 ANKRD54Q6NXT1 300 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 RUFY4Q6ZNE9 571 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 METTL16Q86W50 562 aaKnown RBP4.71□□□□□ -1.66
YBX3-205ENST00000536107 FBXO16Q8IX29 292 aaPredicted RBP4.71□□□□□ -1.66
YBX3-205ENST00000536107 POF1BQ8WVV4 589 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 SEPT8Q92599 483 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 COPS5Q92905 334 aa4.71□□□□□ -1.66
YBX3-205ENST00000536107 RCC1LQ96I51 464 aaKnown RBP4.71□□□□□ -1.66
YBX3-205ENST00000536107 SUCLG2Q96I99 432 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms