RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 PHKA2P46019 1235 aa14.18□□□□□ -0.14
VPS33B-202ENST00000535906 RAP1GAPP47736 663 aa14.18□□□□□ -0.14
VPS33B-202ENST00000535906 MAGOHP61326 146 aaKnown RBP14.18□□□□□ -0.14
VPS33B-202ENST00000535906 KLF1Q13351 362 aaPredicted RBP14.18□□□□□ -0.14
VPS33B-202ENST00000535906 PPP1R7Q15435 360 aa14.18□□□□□ -0.14
VPS33B-202ENST00000535906 TTC31Q49AM3 519 aaPredicted RBP14.18□□□□□ -0.14
VPS33B-202ENST00000535906 UBAP2Q5T6F2 1119 aaKnown RBP14.18□□□□□ -0.14
VPS33B-202ENST00000535906 PPP1R2P3Q6NXS1 205 aa14.18□□□□□ -0.14
VPS33B-202ENST00000535906 HOOK3Q86VS8 718 aa14.18□□□□□ -0.14
VPS33B-202ENST00000535906 C1orf127Q8N9H9 656 aa14.18□□□□□ -0.14
VPS33B-202ENST00000535906 ART4Q93070 314 aa14.18□□□□□ -0.14
VPS33B-202ENST00000535906 RNF25Q96BH1 459 aaPredicted RBP14.18□□□□□ -0.14
VPS33B-202ENST00000535906 TLCD1Q96CP7 247 aa14.18□□□□□ -0.14
VPS33B-202ENST00000535906 CPB2Q96IY4 423 aa14.18□□□□□ -0.14
VPS33B-202ENST00000535906 C16orf70Q9BSU1 422 aa14.18□□□□□ -0.14
VPS33B-202ENST00000535906 KATNBL1Q9H079 304 aa14.18□□□□□ -0.14
VPS33B-202ENST00000535906 VTA1Q9NP79 307 aa14.18□□□□□ -0.14
VPS33B-202ENST00000535906 PPANQ9NQ55 473 aaKnown RBP14.18□□□□□ -0.14
VPS33B-202ENST00000535906 GGA2Q9UJY4 613 aa14.18□□□□□ -0.14
VPS33B-202ENST00000535906 TMEM191CA6NGB0 347 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 LACTBL1A8MY62 500 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 DCDC2CA8MYV0 355 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 TP73O15350 636 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 LSM8O95777 96 aaKnown RBP14.17□□□□□ -0.14
VPS33B-202ENST00000535906 SNAI1O95863 264 aaPredicted RBP14.17□□□□□ -0.14
VPS33B-202ENST00000535906 PAEPP09466 180 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 STAG3L1P0CL83 205 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 SSR1P43307 286 aaKnown RBP14.17□□□□□ -0.14
VPS33B-202ENST00000535906 KRT17Q04695 432 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 POU5F1BQ06416 359 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 ZNF252P-AS1Q0IIN9 211 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 FAM187BQ17R55 369 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 ATP13A4Q4VNC1 1196 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 MAP1SQ66K74 1059 aaPredicted RBP14.17□□□□□ -0.14
VPS33B-202ENST00000535906 PACS2Q86VP3 889 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 KATNAL2Q8IYT4 538 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 TMEM35BQ8NCS4 154 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 C3orf20Q8ND61 904 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 GTF3C2Q8WUA4 911 aaPredicted RBP14.17□□□□□ -0.14
VPS33B-202ENST00000535906 DCLK3Q9C098 648 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 SEMA4AQ9H3S1 761 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.17□□□□□ -0.14
VPS33B-202ENST00000535906 AKT3Q9Y243 479 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 CCL15-CCL14A0A0B4J2E2 113 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 RBM47A0AV96 593 aaKnown RBP14.17□□□□□ -0.14
VPS33B-202ENST00000535906 GMNCA6NCL1 334 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 TRAPPC3O43617 180 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 IL18RAPO95256 599 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 TMOD1P28289 359 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 CDH8P55286 799 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 CCL15Q16663 113 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 WDR72Q3MJ13 1102 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 JADE1Q6IE81 842 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 YTHDF3Q7Z739 585 aaKnown RBP14.17□□□□□ -0.14
VPS33B-202ENST00000535906 MICALL1Q8N3F8 863 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 MAIP1Q8WWC4 291 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 MCEEQ96PE7 176 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 FAM118BQ9BPY3 351 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 PDZD7Q9H5P4 517 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 MTRF1LQ9UGC7 380 aaKnown RBP14.17□□□□□ -0.14
VPS33B-202ENST00000535906 IP6K2Q9UHH9 426 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 PCDHGC3Q9UN70 934 aa14.17□□□□□ -0.14
VPS33B-202ENST00000535906 MAGEB2O15479 319 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 KIAA0754O94854 1291 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 CALB1P05937 261 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 CETPP11597 493 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 EIF4BP23588 611 aaKnown RBP14.16□□□□□ -0.14
VPS33B-202ENST00000535906 CDH5P33151 784 aaPredicted RBP14.16□□□□□ -0.14
VPS33B-202ENST00000535906 MAN1A1P33908 653 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 LIG3P49916 1009 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 OGDHQ02218 1023 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 SLC29A2Q14542 456 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 DENND2CQ68D51 928 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 BRI3BPQ8WY22 251 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 OSBPL8Q9BZF1 889 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 ZNF518BQ9C0D4 1074 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 CNOT10Q9H9A5 744 aaKnown RBP14.16□□□□□ -0.14
VPS33B-202ENST00000535906 KLHL11Q9NVR0 708 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 CLEC11AQ9Y240 323 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 F8VP50 259 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 H3BRB1 525 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 CAND2O75155 1236 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 ITGB3P05106 788 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 ARF4P18085 180 aaPredicted RBP14.16□□□□□ -0.14
VPS33B-202ENST00000535906 LACTBP83111 547 aaPredicted RBP14.16□□□□□ -0.14
VPS33B-202ENST00000535906 PPARDQ03181 441 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 BYSLQ13895 437 aaKnown RBP14.16□□□□□ -0.14
VPS33B-202ENST00000535906 TRIP13Q15645 432 aaPredicted RBP14.16□□□□□ -0.14
VPS33B-202ENST00000535906 CYP4A22Q5TCH4 519 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 IFNLR1Q8IU57 520 aaPredicted RBP14.16□□□□□ -0.14
VPS33B-202ENST00000535906 EXD1Q8NHP7 514 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 CXorf38Q8TB03 319 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 EMID1Q96A84 441 aaPredicted RBP14.16□□□□□ -0.14
VPS33B-202ENST00000535906 BCO2Q9BYV7 579 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 SDCBP2Q9H190 292 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 TUT1Q9H6E5 874 aaKnown RBP14.16□□□□□ -0.14
VPS33B-202ENST00000535906 IVNS1ABPQ9Y6Y0 642 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 ZSWIM8A7E2V4 1837 aa14.16□□□□□ -0.14
VPS33B-202ENST00000535906 STRNO43815 780 aa14.15□□□□□ -0.14
VPS33B-202ENST00000535906 MCF2P10911 925 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms