RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 CSRP2Q16527 193 aa12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 SLFN12LQ6IEE8 588 aa12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 USP37Q86T82 979 aa12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 LONP2Q86WA8 852 aa12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 KIAA1958Q8N8K9 716 aa12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 NETO1Q8TDF5 533 aa12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 LRRC15Q8TF66 581 aa12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 LEO1Q8WVC0 666 aaPredicted RBP12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 SENP8Q96LD8 212 aa12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 FAM83CQ9BQN1 747 aa12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 RPF1Q9H9Y2 349 aaKnown RBP12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 PARD6AQ9NPB6 346 aa12.16□□□□□ -0.46
CLSTN3-206ENST00000535668 SCN1AP35498 2009 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 CHURC1-FNTBB4DL54 471 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 SPECC1L-ADORA2AF8WAN1 911 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 TRAK2O60296 914 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 AKAP3O75969 853 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 DDX6P26196 483 aaKnown RBP eCLIP12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 CDC25CP30307 473 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 MCM2P49736 904 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 LIG4P49917 911 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 ARPP19P56211 112 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 CACNB1Q02641 598 aaPredicted RBP12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 ZNF268Q14587 947 aaPredicted RBP12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 C8orf34Q49A92 452 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 SEZ6Q53EL9 994 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 TSSK4Q6SA08 328 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 BRAPQ7Z569 592 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 ATAD1Q8NBU5 361 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 OR10T2Q8NGX3 314 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 SPPL2BQ8TCT7 592 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 CEP295NLQ96MC4 621 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 ABCB6Q9NP58 842 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 GMEB2Q9UKD1 530 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 SDK1Q7Z5N4 2213 aa12.15□□□□□ -0.46
CLSTN3-206ENST00000535668 TSC2P49815 1807 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 DENND4CQ5VZ89 1909 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 A0A1W2PRU2 124 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 VWA3AA6NCI4 1184 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 TRDMT1O14717 391 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 HRO43593 1189 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 MYL4P12829 197 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 TCF3P15923 654 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 CCNE1P24864 410 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 DDIT3P35638 169 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 UBA7P41226 1012 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 POSTNQ15063 836 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 PTPAQ15257 358 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 TMEM196Q5HYL7 178 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 ARMCX5Q6P1M9 558 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 TXNDC11Q6PKC3 985 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 CRELD2Q6UXH1 353 aaPredicted RBP12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 ZNF720Q7Z2F6 126 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 LIMS2Q7Z4I7 341 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 TMEM150AQ86TG1 271 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 WDR5BQ86VZ2 330 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 CXorf38Q8TB03 319 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 BPIFB1Q8TDL5 484 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 CSGALNACT1Q8TDX6 532 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 RAD54LQ92698 747 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 CALML4Q96GE6 196 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 TRMT2BQ96GJ1 504 aaKnown RBP12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 CDK5RAP3Q96JB5 506 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 TMX3Q96JJ7 454 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 MYRFLQ96LU7 910 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 HINFPQ9BQA5 517 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 KIF9Q9HAQ2 790 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 SEL1LQ9UBV2 794 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 TIMM13Q9Y5L4 95 aaPredicted RBP12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 GTF3C3Q9Y5Q9 886 aa12.14□□□□□ -0.47
CLSTN3-206ENST00000535668 ANK1P16157 1881 aa12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 PPEF2O14830 753 aa12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 TM4SF5O14894 197 aa12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 ADRB1P08588 477 aa12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 HAPLN1P10915 354 aaPredicted RBP12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 HMGA1P17096 107 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 ATF6P18850 670 aa12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 ADSSP30520 456 aa12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 PNPLA4P41247 253 aa12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 SATB1Q01826 763 aa12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 TMEM132DQ14C87 1099 aa12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 ARHGAP15Q53QZ3 475 aa12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 JADE1Q6IE81 842 aa12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 DSTYKQ6XUX3 929 aa12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 CMTM8Q8IZV2 173 aa12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 DDX1Q92499 740 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 ZC3H10Q96K80 434 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 MSTO1Q9BUK6 570 aa12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 SLC46A2Q9BY10 475 aa12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 OLFML3Q9NRN5 406 aa12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 CDV3Q9UKY7 258 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 RAB23Q9ULC3 237 aa12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 NDRG2Q9UN36 371 aaKnown RBP12.13□□□□□ -0.47
CLSTN3-206ENST00000535668 NPHP3-ACAD11A0A0J9YXS1 232 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 FRMD3A2A2Y4 597 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 IL18RAPO95256 599 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 PRAMEF12O95522 483 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 F11P03951 625 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 NFICP08651 508 aa12.12□□□□□ -0.47
CLSTN3-206ENST00000535668 OR4Q2P0C623 313 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms