RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 ADRA1BP35368 520 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 NPTX2P47972 431 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 KCNJ5P48544 419 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 U2AF1Q01081 240 aaKnown RBP eCLIP6.49□□□□□ -1.37
PRKDC-205ENST00000535375 COL10A1Q03692 680 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 KRTAP15-1Q3LI76 137 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 KHDC1LQ5JSQ8 128 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 USP37Q86T82 979 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 PPP1R3BQ86XI6 285 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 DENND1CQ8IV53 801 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 DNAJC10Q8IXB1 793 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 PCSK9Q8NBP7 692 aaKnown RBP6.49□□□□□ -1.37
PRKDC-205ENST00000535375 B3GALNT2Q8NCR0 500 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 PSD4Q8NDX1 1056 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 SLC30A5Q8TAD4 765 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 KLHDC4Q8TBB5 520 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 POC1BQ8TC44 478 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 ACTRT2Q8TDY3 377 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 DIS3LQ8TF46 1054 aaKnown RBP6.49□□□□□ -1.37
PRKDC-205ENST00000535375 TINAGL1Q9GZM7 467 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-205ENST00000535375 TCEAL9Q9UHQ7 104 aa6.49□□□□□ -1.37
PRKDC-205ENST00000535375 A0A0B4J269 797 aa6.48□□□□□ -1.37
PRKDC-205ENST00000535375 PRSS29PA6NIE9 313 aa6.48□□□□□ -1.37
PRKDC-205ENST00000535375 ZAR1LA6NP61 321 aa6.48□□□□□ -1.37
PRKDC-205ENST00000535375 TRIAP1O43715 76 aa6.48□□□□□ -1.37
PRKDC-205ENST00000535375 SOAT2O75908 522 aa6.48□□□□□ -1.37
PRKDC-205ENST00000535375 KIF20AO95235 890 aa6.48□□□□□ -1.37
PRKDC-205ENST00000535375 ITGALP20701 1170 aa6.48□□□□□ -1.37
PRKDC-205ENST00000535375 LPOP22079 712 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-205ENST00000535375 FOLR3P41439 243 aa6.48□□□□□ -1.37
PRKDC-205ENST00000535375 NKX6-1P78426 367 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-205ENST00000535375 TUBB3Q13509 450 aa6.48□□□□□ -1.37
PRKDC-205ENST00000535375 ZNF169Q14929 603 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-205ENST00000535375 DAAM2Q86T65 1068 aa6.48□□□□□ -1.37
PRKDC-205ENST00000535375 CHPFQ8IZ52 775 aa6.48□□□□□ -1.37
PRKDC-205ENST00000535375 LRIG1Q96JA1 1093 aa6.48□□□□□ -1.37
PRKDC-205ENST00000535375 CRAMP1Q96RY5 1269 aa6.48□□□□□ -1.37
PRKDC-205ENST00000535375 HEPHQ9BQS7 1158 aa6.48□□□□□ -1.37
PRKDC-205ENST00000535375 RSAD1Q9HA92 442 aa6.48□□□□□ -1.37
PRKDC-205ENST00000535375 KIAA1586Q9HCI6 787 aa6.48□□□□□ -1.37
PRKDC-205ENST00000535375 PCDHA6Q9UN73 950 aa6.48□□□□□ -1.37
PRKDC-205ENST00000535375 INSL6Q9Y581 213 aa6.48□□□□□ -1.37
PRKDC-205ENST00000535375 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.48□□□□□ -1.37
PRKDC-205ENST00000535375 RAD54BQ9Y620 910 aa6.48□□□□□ -1.37
PRKDC-205ENST00000535375 M0QYG6 137 aa6.47□□□□□ -1.37
PRKDC-205ENST00000535375 EXOSC9Q06265 439 aaKnown RBP6.47□□□□□ -1.37
PRKDC-205ENST00000535375 FGL2Q14314 439 aa6.47□□□□□ -1.37
PRKDC-205ENST00000535375 AMOTQ4VCS5 1084 aa6.47□□□□□ -1.37
PRKDC-205ENST00000535375 KAZNQ674X7 775 aa6.47□□□□□ -1.37
PRKDC-205ENST00000535375 TAF2Q6P1X5 1199 aa6.47□□□□□ -1.37
PRKDC-205ENST00000535375 VWA1Q6PCB0 445 aa6.47□□□□□ -1.37
PRKDC-205ENST00000535375 FAM9AQ8IZU1 332 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-205ENST00000535375 SLC35G2Q8TBE7 412 aa6.47□□□□□ -1.37
PRKDC-205ENST00000535375 PGBD1Q96JS3 809 aa6.47□□□□□ -1.37
PRKDC-205ENST00000535375 PUS7Q96PZ0 661 aaKnown RBP6.47□□□□□ -1.37
PRKDC-205ENST00000535375 DUSP26Q9BV47 211 aa6.47□□□□□ -1.37
PRKDC-205ENST00000535375 CPA4Q9UI42 421 aa6.47□□□□□ -1.37
PRKDC-205ENST00000535375 NOB1Q9ULX3 412 aaKnown RBP6.47□□□□□ -1.37
PRKDC-205ENST00000535375 AGAP1Q9UPQ3 857 aa6.47□□□□□ -1.37
PRKDC-205ENST00000535375 THRAP3Q9Y2W1 955 aaKnown RBP6.47□□□□□ -1.37
PRKDC-205ENST00000535375 SPATA31A3Q5VYP0 1347 aa6.47□□□□□ -1.37
PRKDC-205ENST00000535375 SALL3Q9BXA9 1300 aa6.47□□□□□ -1.37
PRKDC-205ENST00000535375 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.46□□□□□ -1.38
PRKDC-205ENST00000535375 H3BML4 177 aa6.46□□□□□ -1.38
PRKDC-205ENST00000535375 MPPED1O15442 326 aa6.46□□□□□ -1.38
PRKDC-205ENST00000535375 CHRM3P20309 590 aa6.46□□□□□ -1.38
PRKDC-205ENST00000535375 HTR1BP28222 390 aa6.46□□□□□ -1.38
PRKDC-205ENST00000535375 NDUFV1P49821 464 aa6.46□□□□□ -1.38
PRKDC-205ENST00000535375 SOX8P57073 446 aa6.46□□□□□ -1.38
PRKDC-205ENST00000535375 PPP2R5AQ15172 486 aa6.46□□□□□ -1.38
PRKDC-205ENST00000535375 FAM160B1Q5W0V3 765 aa6.46□□□□□ -1.38
PRKDC-205ENST00000535375 TSHZ1Q6ZSZ6 1077 aa6.46□□□□□ -1.38
PRKDC-205ENST00000535375 FAM46DQ8NEK8 389 aa6.46□□□□□ -1.38
PRKDC-205ENST00000535375 FBXO41Q8TF61 875 aa6.46□□□□□ -1.38
PRKDC-205ENST00000535375 JDP2Q8WYK2 163 aa6.46□□□□□ -1.38
PRKDC-205ENST00000535375 LPIN2Q92539 896 aa6.46□□□□□ -1.38
PRKDC-205ENST00000535375 TPSD1Q9BZJ3 242 aa6.46□□□□□ -1.38
PRKDC-205ENST00000535375 ETAA1Q9NY74 926 aa6.46□□□□□ -1.38
PRKDC-205ENST00000535375 TLK1Q9UKI8 766 aa6.46□□□□□ -1.38
PRKDC-205ENST00000535375 EID1Q9Y6B2 187 aa6.46□□□□□ -1.38
PRKDC-205ENST00000535375 CCDC151A5D8V7 595 aa6.45□□□□□ -1.38
PRKDC-205ENST00000535375 CTNND1O60716 968 aaKnown RBP6.45□□□□□ -1.38
PRKDC-205ENST00000535375 PPP3CBP16298 524 aa6.45□□□□□ -1.38
PRKDC-205ENST00000535375 TYRP1P17643 537 aa6.45□□□□□ -1.38
PRKDC-205ENST00000535375 HDCP19113 662 aa6.45□□□□□ -1.38
PRKDC-205ENST00000535375 RARRES1P49788 294 aa6.45□□□□□ -1.38
PRKDC-205ENST00000535375 NANOS3P60323 173 aaKnown RBP6.45□□□□□ -1.38
PRKDC-205ENST00000535375 ITIH3Q06033 890 aa6.45□□□□□ -1.38
PRKDC-205ENST00000535375 NBPF8Q3BBV2 869 aa6.45□□□□□ -1.38
PRKDC-205ENST00000535375 PRR16Q569H4 304 aa6.45□□□□□ -1.38
PRKDC-205ENST00000535375 EMC10Q5UCC4 262 aa6.45□□□□□ -1.38
PRKDC-205ENST00000535375 CXorf57Q6NSI4 855 aaKnown RBP6.45□□□□□ -1.38
PRKDC-205ENST00000535375 LAYNQ6UX15 382 aa6.45□□□□□ -1.38
PRKDC-205ENST00000535375 RAVER1Q8IY67 606 aaKnown RBP6.45□□□□□ -1.38
PRKDC-205ENST00000535375 ACO2Q99798 780 aaKnown RBP6.45□□□□□ -1.38
PRKDC-205ENST00000535375 SMOC2Q9H3U7 446 aa6.45□□□□□ -1.38
PRKDC-205ENST00000535375 SYNPO2LQ9H987 977 aa6.45□□□□□ -1.38
PRKDC-205ENST00000535375 MRPS18AQ9NVS2 196 aaKnown RBP6.45□□□□□ -1.38
PRKDC-205ENST00000535375 PROM1O43490 865 aa6.44□□□□□ -1.38
PRKDC-205ENST00000535375 MARCH6O60337 910 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms