RNA–Protein interactions for RNA: ENST00000534825.5

CAPRIN1-217, Transcript of cell cycle associated protein 1, humanhuman

TSL 3

Gene CAPRIN1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-217ENST00000534825 TMEM191BP0C7N4 346 aa19.26■□□□□ 0.67
CAPRIN1-217ENST00000534825 TWF1Q12792 350 aa19.26■□□□□ 0.67
CAPRIN1-217ENST00000534825 SNW1Q13573 536 aaKnown RBP19.26■□□□□ 0.67
CAPRIN1-217ENST00000534825 HTR4Q13639 388 aa19.26■□□□□ 0.67
CAPRIN1-217ENST00000534825 PRSS36Q5K4E3 855 aa19.26■□□□□ 0.67
CAPRIN1-217ENST00000534825 TRAPPC11Q7Z392 1133 aa19.26■□□□□ 0.67
CAPRIN1-217ENST00000534825 METTL23Q86XA0 190 aa19.26■□□□□ 0.67
CAPRIN1-217ENST00000534825 SLC9A9Q8IVB4 645 aa19.26■□□□□ 0.67
CAPRIN1-217ENST00000534825 THEM5Q8N1Q8 247 aa19.26■□□□□ 0.67
CAPRIN1-217ENST00000534825 PDCL2Q8N4E4 241 aa19.26■□□□□ 0.67
CAPRIN1-217ENST00000534825 ST13P5Q8NFI4 369 aaPredicted RBP19.26■□□□□ 0.67
CAPRIN1-217ENST00000534825 GOLGA5Q8TBA6 731 aa19.26■□□□□ 0.67
CAPRIN1-217ENST00000534825 ANKRD36BP1Q96IX9 119 aa19.26■□□□□ 0.67
CAPRIN1-217ENST00000534825 CORO1BQ9BR76 489 aa19.26■□□□□ 0.67
CAPRIN1-217ENST00000534825 RPP25Q9BUL9 199 aaKnown RBP19.26■□□□□ 0.67
CAPRIN1-217ENST00000534825 MRPS23Q9Y3D9 190 aaKnown RBP19.26■□□□□ 0.67
CAPRIN1-217ENST00000534825 PDXKO00764 312 aa19.25■□□□□ 0.67
CAPRIN1-217ENST00000534825 PDGFBP01127 241 aaPredicted RBP19.25■□□□□ 0.67
CAPRIN1-217ENST00000534825 CCR2P41597 374 aa19.25■□□□□ 0.67
CAPRIN1-217ENST00000534825 KCNB1Q14721 858 aa19.25■□□□□ 0.67
CAPRIN1-217ENST00000534825 PARM1Q6UWI2 310 aa19.25■□□□□ 0.67
CAPRIN1-217ENST00000534825 LIMS2Q7Z4I7 341 aa19.25■□□□□ 0.67
CAPRIN1-217ENST00000534825 NPAS3Q8IXF0 933 aa19.25■□□□□ 0.67
CAPRIN1-217ENST00000534825 HS6ST3Q8IZP7 471 aa19.25■□□□□ 0.67
CAPRIN1-217ENST00000534825 TTC9BQ8N6N2 239 aa19.25■□□□□ 0.67
CAPRIN1-217ENST00000534825 PLEKHO2Q8TD55 490 aa19.25■□□□□ 0.67
CAPRIN1-217ENST00000534825 CCDC127Q96BQ5 260 aa19.25■□□□□ 0.67
CAPRIN1-217ENST00000534825 TCEAL4Q96EI5 215 aa19.25■□□□□ 0.67
CAPRIN1-217ENST00000534825 ZNF512Q96ME7 567 aaPredicted RBP19.25■□□□□ 0.67
CAPRIN1-217ENST00000534825 DNAJC25Q9H1X3 360 aa19.25■□□□□ 0.67
CAPRIN1-217ENST00000534825 HSFX1Q9UBD0 423 aa19.25■□□□□ 0.67
CAPRIN1-217ENST00000534825 L1RE1Q9UN81 338 aa19.25■□□□□ 0.67
CAPRIN1-217ENST00000534825 DUSP12Q9UNI6 340 aa19.25■□□□□ 0.67
CAPRIN1-217ENST00000534825 YIPF1Q9Y548 306 aa19.25■□□□□ 0.67
CAPRIN1-217ENST00000534825 GABRDO14764 452 aa19.24■□□□□ 0.67
CAPRIN1-217ENST00000534825 NARSO43776 548 aaKnown RBP19.24■□□□□ 0.67
CAPRIN1-217ENST00000534825 EXOC3O60645 756 aa19.24■□□□□ 0.67
CAPRIN1-217ENST00000534825 TNNC2P02585 160 aa19.24■□□□□ 0.67
CAPRIN1-217ENST00000534825 DLATP10515 647 aaKnown RBP19.24■□□□□ 0.67
CAPRIN1-217ENST00000534825 TNNI1P19237 187 aa19.24■□□□□ 0.67
CAPRIN1-217ENST00000534825 EPHA5P54756 1037 aa19.24■□□□□ 0.67
CAPRIN1-217ENST00000534825 BFSP1Q12934 665 aa19.24■□□□□ 0.67
CAPRIN1-217ENST00000534825 SOWAHAQ2M3V2 549 aa19.24■□□□□ 0.67
CAPRIN1-217ENST00000534825 SLC39A12Q504Y0 691 aa19.24■□□□□ 0.67
CAPRIN1-217ENST00000534825 CLEC17AQ6ZS10 378 aa19.24■□□□□ 0.67
CAPRIN1-217ENST00000534825 FGF14Q92915 247 aa19.24■□□□□ 0.67
CAPRIN1-217ENST00000534825 FNBP1Q96RU3 617 aa19.24■□□□□ 0.67
CAPRIN1-217ENST00000534825 CGRRF1Q99675 332 aa19.24■□□□□ 0.67
CAPRIN1-217ENST00000534825 LRRC3Q9BY71 257 aa19.24■□□□□ 0.67
CAPRIN1-217ENST00000534825 SNX9Q9Y5X1 595 aa19.24■□□□□ 0.67
CAPRIN1-217ENST00000534825 NUMBLQ9Y6R0 609 aa19.24■□□□□ 0.67
CAPRIN1-217ENST00000534825 HUS1O60921 280 aa19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 PRPF40AO75400 957 aaKnown RBP19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 MOSPD3O75425 235 aa19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 MICAL2O94851 1124 aa19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 CDR1P51861 262 aa19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 CLDN10P78369 228 aa19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 IQCEQ6IPM2 695 aa19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 DPH6Q7L8W6 267 aa19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 OSTM1Q86WC4 334 aa19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 TMEM86AQ8N2M4 240 aa19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 FBXL6Q8N531 539 aa19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 TOP6BLQ8N6T0 577 aa19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 PARD3BQ8TEW8 1205 aa19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 ING5Q8WYH8 240 aa19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 MCRS1Q96EZ8 462 aa19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 HPDLQ96IR7 371 aa19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 ACBD6Q9BR61 282 aa19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 TMLHEQ9NVH6 421 aa19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 GDE1Q9NZC3 331 aa19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 TRAF3IP3Q9Y228 551 aa19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 ARIH1Q9Y4X5 557 aaPredicted RBP19.23■□□□□ 0.67
CAPRIN1-217ENST00000534825 ZNF318Q5VUA4 2279 aa19.22■□□□□ 0.67
CAPRIN1-217ENST00000534825 GOLGA6L4A6NEF3 574 aa19.22■□□□□ 0.67
CAPRIN1-217ENST00000534825 ZNF197O14709 1029 aa19.22■□□□□ 0.67
CAPRIN1-217ENST00000534825 SOAT2O75908 522 aa19.22■□□□□ 0.67
CAPRIN1-217ENST00000534825 CEBPBP17676 345 aa19.22■□□□□ 0.67
CAPRIN1-217ENST00000534825 CASP4P49662 377 aa19.22■□□□□ 0.67
CAPRIN1-217ENST00000534825 SMARCB1Q12824 385 aa19.22■□□□□ 0.67
CAPRIN1-217ENST00000534825 MYO1EQ12965 1108 aa19.22■□□□□ 0.67
CAPRIN1-217ENST00000534825 CYP4A22Q5TCH4 519 aa19.22■□□□□ 0.67
CAPRIN1-217ENST00000534825 ELMOD1Q8N336 334 aa19.22■□□□□ 0.67
CAPRIN1-217ENST00000534825 SPATA18Q8TC71 538 aa19.22■□□□□ 0.67
CAPRIN1-217ENST00000534825 DDX43Q9NXZ2 648 aaKnown RBP19.22■□□□□ 0.67
CAPRIN1-217ENST00000534825 MAPK8IP1Q9UQF2 711 aa19.22■□□□□ 0.67
CAPRIN1-217ENST00000534825 NR3C1P04150 777 aa19.21■□□□□ 0.67
CAPRIN1-217ENST00000534825 ALDH1A3P47895 512 aa19.21■□□□□ 0.67
CAPRIN1-217ENST00000534825 TUFMP49411 452 aaKnown RBP19.21■□□□□ 0.67
CAPRIN1-217ENST00000534825 PLD1Q13393 1074 aa19.21■□□□□ 0.67
CAPRIN1-217ENST00000534825 PNOCQ13519 176 aa19.21■□□□□ 0.67
CAPRIN1-217ENST00000534825 PDZD4Q76G19 769 aaPredicted RBP19.21■□□□□ 0.67
CAPRIN1-217ENST00000534825 DNAJB7Q7Z6W7 309 aaPredicted RBP19.21■□□□□ 0.67
CAPRIN1-217ENST00000534825 TMC8Q8IU68 726 aa19.21■□□□□ 0.67
CAPRIN1-217ENST00000534825 DCP1BQ8IZD4 617 aaKnown RBP19.21■□□□□ 0.67
CAPRIN1-217ENST00000534825 GUF1Q8N442 669 aaKnown RBP19.21■□□□□ 0.67
CAPRIN1-217ENST00000534825 CCDC47Q96A33 483 aaKnown RBP19.21■□□□□ 0.67
CAPRIN1-217ENST00000534825 IPO9Q96P70 1041 aaKnown RBP19.21■□□□□ 0.67
CAPRIN1-217ENST00000534825 PKMYT1Q99640 499 aa19.21■□□□□ 0.67
CAPRIN1-217ENST00000534825 WNT16Q9UBV4 365 aa19.21■□□□□ 0.67
CAPRIN1-217ENST00000534825 HCN4Q9Y3Q4 1203 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms