RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 SLC16A4O15374 487 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 TEX33O43247 280 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 NARSO43776 548 aaKnown RBP13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 NR3C1P04150 777 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 C8AP07357 584 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 TPM1P09493 284 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 HNRNPA1P09651 372 aaKnown RBP eCLIP13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 ATXN8OSP0DMR3 200 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 MCF2P10911 925 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 LAMP2P13473 410 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 OR1D2P34982 312 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 PSMC2P35998 433 aaKnown RBP13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 CLCN5P51795 746 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 OSTNP61366 133 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 UBXN1Q04323 297 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 SOX4Q06945 474 aaPredicted RBP13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 ENPEPQ07075 957 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 RAB33AQ14088 237 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 CCDC40Q4G0X9 1142 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 ZC2HC1CQ53FD0 456 aaPredicted RBP13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 MIIPQ5JXC2 388 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 LIN9Q5TKA1 542 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 CWF19L1Q69YN2 538 aaKnown RBP13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 MAP4K3Q8IVH8 894 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 SYCP3Q8IZU3 236 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 ATOH1Q92858 354 aaPredicted RBP13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 NXPE3Q969Y0 559 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 DDX27Q96GQ7 796 aaKnown RBP13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 TCHPQ9BT92 498 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 NDST4Q9H3R1 872 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 GOLGA2P5Q9HBQ8 144 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 AGPAT3Q9NRZ7 376 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 SLC38A7Q9NVC3 462 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 FAM86C1Q9NVL1 165 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 FBXL21Q9UKT6 434 aa13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.28□□□□□ -0.28
CHRDL2-209ENST00000534276 ANHXE9PGG2 379 aa13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 H0Y858 1186 aa13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 KIAA0391O15091 583 aaKnown RBP13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 TRAPPC3O43617 180 aa13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 EPB41P11171 864 aaKnown RBP13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 KCNE1P15382 129 aa13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 NPR3P17342 541 aa13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 MSNP26038 577 aaKnown RBP13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 HOXA9P31269 272 aa13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 BRCC3P46736 316 aa13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 PPM1LQ5SGD2 360 aa13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 MPZL3Q6UWV2 235 aa13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 RSPO2Q6UXX9 243 aaPredicted RBP13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 GET4Q7L5D6 327 aaPredicted RBP13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 GRASPQ7Z6J2 395 aaPredicted RBP13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 SIX5Q8N196 739 aa13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 SLC44A3Q8N4M1 653 aa13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 C3orf58Q8NDZ4 430 aa13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 FLCNQ8NFG4 579 aa13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 SNX27Q96L92 541 aa13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 ZMAT2Q96NC0 199 aaKnown RBP13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 ACAP3Q96P50 834 aa13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 EDEM3Q9BZQ6 932 aa13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 WNT16Q9UBV4 365 aa13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 ARMCX3Q9UH62 379 aaPredicted RBP13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 TBX20Q9UMR3 447 aa13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 BACE2Q9Y5Z0 518 aa13.27□□□□□ -0.29
CHRDL2-209ENST00000534276 DOCK8Q8NF50 2099 aa13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 I3L4J1 428 aa13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 MEFVO15553 781 aaPredicted RBP13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 PIGRP01833 764 aa13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 HARSP12081 509 aaKnown RBP13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 AOC1P19801 751 aa13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 FSHRP23945 695 aa13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 TKTP29401 623 aaKnown RBP13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 KCNA1Q09470 495 aa13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 HTR4Q13639 388 aa13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 ANKS3Q6ZW76 656 aa13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 CREBRFQ8IUR6 639 aa13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 CNGA4Q8IV77 575 aa13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 SLC7A14Q8TBB6 771 aa13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 CACTINQ8WUQ7 758 aaKnown RBP13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 ZBTB45Q96K62 511 aaPredicted RBP13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 PANX2Q96RD6 677 aa13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 CNTN3Q9P232 1028 aa13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 FRMD4BQ9Y2L6 1034 aa13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 CDY1Q9Y6F8 540 aa13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 MTCL1Q9Y4B5 1905 aaKnown RBP13.26□□□□□ -0.29
CHRDL2-209ENST00000534276 WDFY4Q6ZS81 3184 aa13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 A0A1W2PQJ5 194 aa13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 AKR1B15C9JRZ8 316 aaPredicted RBP13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 PODXLO00592 558 aa13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 CCL16O15467 120 aa13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 PI15O43692 258 aa13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 ZNF500O60304 480 aaPredicted RBP13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 XYLBO75191 536 aa13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 TOM1L1O75674 476 aa13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 CFHP08603 1231 aa13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 POU2F2P09086 479 aa13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 SRFP11831 508 aa13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 NTHL1P78549 312 aa13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 STRN3Q13033 797 aa13.25□□□□□ -0.29
CHRDL2-209ENST00000534276 ZPBP2Q6X784 338 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms