RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 CNPPD1Q9BV87 410 aa5.06□□□□□ -1.6
ATPAF1-211ENST00000534216 TINAGL1Q9GZM7 467 aaPredicted RBP5.06□□□□□ -1.6
ATPAF1-211ENST00000534216 SIK2Q9H0K1 926 aa5.06□□□□□ -1.6
ATPAF1-211ENST00000534216 C11orf21Q9P2W6 132 aa5.06□□□□□ -1.6
ATPAF1-211ENST00000534216 DMTF1Q9Y222 760 aa5.06□□□□□ -1.6
ATPAF1-211ENST00000534216 SALL3Q9BXA9 1300 aa5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 KIF20AO95235 890 aa5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 SCGB1D2O95969 90 aa5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 GNAI2P04899 355 aa5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 EXOSC9Q06265 439 aaKnown RBP5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 HLXQ14774 488 aaPredicted RBP5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 SMN1Q16637 294 aaKnown RBP5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 PREPLQ4J6C6 727 aaPredicted RBP5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 FAM102BQ5T8I3 360 aa5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 CXorf57Q6NSI4 855 aaKnown RBP5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 VWA1Q6PCB0 445 aa5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 SLC30A10Q6XR72 485 aa5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 MICALCLQ6ZW33 695 aa5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 PPP1R32Q7Z5V6 425 aa5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 USP37Q86T82 979 aa5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 CHPFQ8IZ52 775 aa5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 SLC30A5Q8TAD4 765 aa5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 SLC9A6Q92581 669 aa5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 DDX17Q92841 729 aaKnown RBP5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 LRFN3Q9BTN0 628 aa5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 SYNPO2LQ9H987 977 aa5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 ARMT1Q9H993 441 aa5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 RSAD1Q9HA92 442 aa5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 GABBR1Q9UBS5 961 aa5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 NOB1Q9ULX3 412 aaKnown RBP5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.05□□□□□ -1.6
ATPAF1-211ENST00000534216 SPATA31A3Q5VYP0 1347 aa5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 A0A088AWK7 358 aa5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 YY2O15391 372 aa5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 PRPF3O43395 683 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 VPS4BO75351 444 aa5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 UBXN7O94888 489 aa5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 U2AF1L5P0DN76 240 aaPredicted RBP5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 HDCP19113 662 aa5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 HTR1BP28222 390 aa5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 PLA2G5P39877 138 aa5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 NPTX2P47972 431 aa5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 RAB1AP62820 205 aa5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 U2AF1Q01081 240 aaKnown RBP eCLIP5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 FGL2Q14314 439 aa5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 PPP2R5AQ15172 486 aa5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 TAF2Q6P1X5 1199 aa5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 CELF5Q8N6W0 485 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 PSD4Q8NDX1 1056 aa5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 PPP1R35Q8TAP8 253 aa5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 FBXO41Q8TF61 875 aa5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 LPIN2Q92539 896 aa5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 SMOC2Q9H3U7 446 aa5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 ALG13Q9NP73 1137 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 SARS2Q9NP81 518 aaKnown RBP5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 PCDHA6Q9UN73 950 aa5.04□□□□□ -1.6
ATPAF1-211ENST00000534216 M0QYG6 137 aa5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 PROM1O43490 865 aa5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 PEX1O43933 1283 aa5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 BMP5P22003 454 aa5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 CXCR5P32302 372 aa5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 TOB1P50616 345 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 SOX8P57073 446 aa5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 MRPS35P82673 323 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 ZNF169Q14929 603 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 PRR16Q569H4 304 aa5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 KHDC1LQ5JSQ8 128 aa5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 KIAA0895LQ68EN5 471 aa5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 NXNQ6DKJ4 435 aa5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 DAAM2Q86T65 1068 aa5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 TCEAL8Q8IYN2 117 aa5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 FAM9AQ8IZU1 332 aaPredicted RBP5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 ZBTB34Q8NCN2 500 aa5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 RUNDC1Q96C34 613 aa5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 ZG16BQ96DA0 208 aa5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 TCEAL9Q9UHQ7 104 aa5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 G3BP2Q9UN86 482 aaKnown RBP5.03□□□□□ -1.6
ATPAF1-211ENST00000534216 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 A0A0B4J269 797 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 F5H697 171 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 KIAA0355O15063 1070 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 CTNND1O60716 968 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 SOAT2O75908 522 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 DNAJB5O75953 348 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 MYBP10242 640 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 PIM1P11309 404 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 PPP3CBP16298 524 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 CHRM3P20309 590 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 FOLR3P41439 243 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 NDUFV1P49821 464 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 SIM1P81133 766 aaPredicted RBP5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 TUBB3Q13509 450 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 ERCC6LQ2NKX8 1250 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 FAM160B1Q5W0V3 765 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 TSHZ1Q6ZSZ6 1077 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 OVCH2Q7RTZ1 564 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 MAGEB6Q8N7X4 407 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 PCSK9Q8NBP7 692 aaKnown RBP5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 MYCBPAPQ8TBZ2 947 aa5.02□□□□□ -1.61
ATPAF1-211ENST00000534216 ACTRT2Q8TDY3 377 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms