RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 RNF19BQ6ZMZ0 732 aa17.01■□□□□ 0.31
TSKU-204ENST00000533752 GRASPQ7Z6J2 395 aaPredicted RBP17.01■□□□□ 0.31
TSKU-204ENST00000533752 DCP1BQ8IZD4 617 aaKnown RBP17.01■□□□□ 0.31
TSKU-204ENST00000533752 ADGRF2Q8IZF7 708 aa17.01■□□□□ 0.31
TSKU-204ENST00000533752 OR10T2Q8NGX3 314 aa17.01■□□□□ 0.31
TSKU-204ENST00000533752 SYAP1Q96A49 352 aaPredicted RBP17.01■□□□□ 0.31
TSKU-204ENST00000533752 FAM84AQ96KN4 292 aa17.01■□□□□ 0.31
TSKU-204ENST00000533752 MKNK1Q9BUB5 465 aa17.01■□□□□ 0.31
TSKU-204ENST00000533752 ZCWPW1Q9H0M4 648 aa17.01■□□□□ 0.31
TSKU-204ENST00000533752 GZF1Q9H116 711 aaPredicted RBP17.01■□□□□ 0.31
TSKU-204ENST00000533752 MUTYHQ9UIF7 546 aa17.01■□□□□ 0.31
TSKU-204ENST00000533752 L1RE1Q9UN81 338 aa17.01■□□□□ 0.31
TSKU-204ENST00000533752 ZFP37Q9Y6Q3 630 aaPredicted RBP17.01■□□□□ 0.31
TSKU-204ENST00000533752 MTMR11A4FU01 709 aa17■□□□□ 0.31
TSKU-204ENST00000533752 LRRIQ3A6PVS8 624 aaPredicted RBP17■□□□□ 0.31
TSKU-204ENST00000533752 PSMA7O14818 248 aa17■□□□□ 0.31
TSKU-204ENST00000533752 IKBKBO14920 756 aa17■□□□□ 0.31
TSKU-204ENST00000533752 SEC24AO95486 1093 aa17■□□□□ 0.31
TSKU-204ENST00000533752 OR4Q2P0C623 313 aa17■□□□□ 0.31
TSKU-204ENST00000533752 FSHRP23945 695 aa17■□□□□ 0.31
TSKU-204ENST00000533752 PCSK1P29120 753 aa17■□□□□ 0.31
TSKU-204ENST00000533752 GBP2P32456 591 aaPredicted RBP17■□□□□ 0.31
TSKU-204ENST00000533752 PSMC2P35998 433 aaKnown RBP17■□□□□ 0.31
TSKU-204ENST00000533752 PRCPP42785 496 aa17■□□□□ 0.31
TSKU-204ENST00000533752 LHX1P48742 406 aa17■□□□□ 0.31
TSKU-204ENST00000533752 CASP4P49662 377 aa17■□□□□ 0.31
TSKU-204ENST00000533752 LRRC63Q05C16 580 aa17■□□□□ 0.31
TSKU-204ENST00000533752 ADAM9Q13443 819 aa17■□□□□ 0.31
TSKU-204ENST00000533752 PABPC1LQ4VXU2 614 aaKnown RBP17■□□□□ 0.31
TSKU-204ENST00000533752 CLEC17AQ6ZS10 378 aa17■□□□□ 0.31
TSKU-204ENST00000533752 GET4Q7L5D6 327 aaPredicted RBP17■□□□□ 0.31
TSKU-204ENST00000533752 FAM186BQ8IYM0 893 aa17■□□□□ 0.31
TSKU-204ENST00000533752 LEMD2Q8NC56 503 aa17■□□□□ 0.31
TSKU-204ENST00000533752 FEZF2Q8TBJ5 459 aa17■□□□□ 0.31
TSKU-204ENST00000533752 IPO9Q96P70 1041 aaKnown RBP17■□□□□ 0.31
TSKU-204ENST00000533752 AVENQ9NQS1 362 aaPredicted RBP17■□□□□ 0.31
TSKU-204ENST00000533752 YIPF1Q9Y548 306 aa17■□□□□ 0.31
TSKU-204ENST00000533752 CETN3O15182 167 aa16.99■□□□□ 0.31
TSKU-204ENST00000533752 AKAP3O75969 853 aa16.99■□□□□ 0.31
TSKU-204ENST00000533752 EPB41P11171 864 aaKnown RBP16.99■□□□□ 0.31
TSKU-204ENST00000533752 ALDH1A3P47895 512 aa16.99■□□□□ 0.31
TSKU-204ENST00000533752 VAMP7P51809 220 aa16.99■□□□□ 0.31
TSKU-204ENST00000533752 TNNC1P63316 161 aa16.99■□□□□ 0.31
TSKU-204ENST00000533752 NFE2Q16621 373 aaPredicted RBP16.99■□□□□ 0.31
TSKU-204ENST00000533752 PTPN21Q16825 1174 aa16.99■□□□□ 0.31
TSKU-204ENST00000533752 SLC39A12Q504Y0 691 aa16.99■□□□□ 0.31
TSKU-204ENST00000533752 TDRD10Q5VZ19 366 aaKnown RBP16.99■□□□□ 0.31
TSKU-204ENST00000533752 IQCEQ6IPM2 695 aa16.99■□□□□ 0.31
TSKU-204ENST00000533752 CENPPQ6IPU0 288 aa16.99■□□□□ 0.31
TSKU-204ENST00000533752 ADSSL1Q8N142 457 aa16.99■□□□□ 0.31
TSKU-204ENST00000533752 SPPL2BQ8TCT7 592 aa16.99■□□□□ 0.31
TSKU-204ENST00000533752 PLEKHO2Q8TD55 490 aa16.99■□□□□ 0.31
TSKU-204ENST00000533752 ERCC4Q92889 916 aaPredicted RBP16.99■□□□□ 0.31
TSKU-204ENST00000533752 PGLYRP2Q96PD5 576 aa16.99■□□□□ 0.31
TSKU-204ENST00000533752 GBP4Q96PP9 640 aa16.99■□□□□ 0.31
TSKU-204ENST00000533752 RTP3Q9BQQ7 232 aa16.99■□□□□ 0.31
TSKU-204ENST00000533752 ACBD6Q9BR61 282 aa16.99■□□□□ 0.31
TSKU-204ENST00000533752 VRTNQ9H8Y1 702 aa16.99■□□□□ 0.31
TSKU-204ENST00000533752 DDX43Q9NXZ2 648 aaKnown RBP16.99■□□□□ 0.31
TSKU-204ENST00000533752 EPS15L1Q9UBC2 864 aa16.99■□□□□ 0.31
TSKU-204ENST00000533752 MAN1B1Q9UKM7 699 aa16.99■□□□□ 0.31
TSKU-204ENST00000533752 SLC16A3O15427 465 aaKnown RBP16.98■□□□□ 0.31
TSKU-204ENST00000533752 CLSTN1O94985 981 aa16.98■□□□□ 0.31
TSKU-204ENST00000533752 FAM163BP0C2L3 166 aa16.98■□□□□ 0.31
TSKU-204ENST00000533752 PTPN2P17706 415 aa16.98■□□□□ 0.31
TSKU-204ENST00000533752 TUFMP49411 452 aaKnown RBP16.98■□□□□ 0.31
TSKU-204ENST00000533752 EPHB3P54753 998 aa16.98■□□□□ 0.31
TSKU-204ENST00000533752 FKBP3Q00688 224 aaKnown RBP16.98■□□□□ 0.31
TSKU-204ENST00000533752 TWF1Q12792 350 aa16.98■□□□□ 0.31
TSKU-204ENST00000533752 DUSP4Q13115 394 aa16.98■□□□□ 0.31
TSKU-204ENST00000533752 MTMR3Q13615 1198 aa16.98■□□□□ 0.31
TSKU-204ENST00000533752 NCOA4Q13772 614 aa16.98■□□□□ 0.31
TSKU-204ENST00000533752 SOWAHAQ2M3V2 549 aa16.98■□□□□ 0.31
TSKU-204ENST00000533752 LIMS2Q7Z4I7 341 aa16.98■□□□□ 0.31
TSKU-204ENST00000533752 TRIML1Q8N9V2 468 aa16.98■□□□□ 0.31
TSKU-204ENST00000533752 ZNF516Q92618 1163 aa16.98■□□□□ 0.31
TSKU-204ENST00000533752 KHSRPQ92945 711 aaKnown RBP eCLIP16.98■□□□□ 0.31
TSKU-204ENST00000533752 NXPE3Q969Y0 559 aa16.98■□□□□ 0.31
TSKU-204ENST00000533752 DHTKD1Q96HY7 919 aaPredicted RBP16.98■□□□□ 0.31
TSKU-204ENST00000533752 ZNF512Q96ME7 567 aaPredicted RBP16.98■□□□□ 0.31
TSKU-204ENST00000533752 TMEM209Q96SK2 561 aa16.98■□□□□ 0.31
TSKU-204ENST00000533752 MMS19Q96T76 1030 aa16.98■□□□□ 0.31
TSKU-204ENST00000533752 IGSF9Q9P2J2 1179 aa16.98■□□□□ 0.31
TSKU-204ENST00000533752 SORCS3Q9UPU3 1222 aa16.98■□□□□ 0.31
TSKU-204ENST00000533752 ZNF197O14709 1029 aa16.97■□□□□ 0.31
TSKU-204ENST00000533752 GABRDO14764 452 aa16.97■□□□□ 0.31
TSKU-204ENST00000533752 STX10O60499 249 aa16.97■□□□□ 0.31
TSKU-204ENST00000533752 VNN2O95498 520 aa16.97■□□□□ 0.31
TSKU-204ENST00000533752 C4BPAP04003 597 aaKnown RBP16.97■□□□□ 0.31
TSKU-204ENST00000533752 RHOP08100 348 aa16.97■□□□□ 0.31
TSKU-204ENST00000533752 P4HA1P13674 534 aa16.97■□□□□ 0.31
TSKU-204ENST00000533752 WARSP23381 471 aaKnown RBP16.97■□□□□ 0.31
TSKU-204ENST00000533752 MORC3Q14149 939 aa16.97■□□□□ 0.31
TSKU-204ENST00000533752 VEPH1Q14D04 833 aa16.97■□□□□ 0.31
TSKU-204ENST00000533752 ZNF699Q32M78 642 aa16.97■□□□□ 0.31
TSKU-204ENST00000533752 WDR72Q3MJ13 1102 aa16.97■□□□□ 0.31
TSKU-204ENST00000533752 ZACNQ401N2 412 aa16.97■□□□□ 0.31
TSKU-204ENST00000533752 INTS6LQ5JSJ4 861 aaKnown RBP16.97■□□□□ 0.31
TSKU-204ENST00000533752 FOXR2Q6PJQ5 311 aa16.97■□□□□ 0.31
TSKU-204ENST00000533752 UBALD2Q8IYN6 164 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 247.5 ms