RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 TCHHQ07283 1943 aa16.66■□□□□ 0.26
CPSF1-211ENST00000533492 KANSL1LA0AUZ9 987 aa16.65■□□□□ 0.26
CPSF1-211ENST00000533492 GFRA3O60609 400 aa16.65■□□□□ 0.26
CPSF1-211ENST00000533492 ITGB3P05106 788 aa16.65■□□□□ 0.26
CPSF1-211ENST00000533492 KRT19P08727 400 aa16.65■□□□□ 0.26
CPSF1-211ENST00000533492 POLR2BP30876 1174 aaKnown RBP16.65■□□□□ 0.26
CPSF1-211ENST00000533492 WNT7BP56706 349 aa16.65■□□□□ 0.26
CPSF1-211ENST00000533492 UBXN2BQ14CS0 331 aa16.65■□□□□ 0.26
CPSF1-211ENST00000533492 MGAT5BQ3V5L5 792 aa16.65■□□□□ 0.26
CPSF1-211ENST00000533492 DNAJB7Q7Z6W7 309 aaPredicted RBP16.65■□□□□ 0.26
CPSF1-211ENST00000533492 ITIH5Q86UX2 942 aa16.65■□□□□ 0.26
CPSF1-211ENST00000533492 DCP1BQ8IZD4 617 aaKnown RBP16.65■□□□□ 0.26
CPSF1-211ENST00000533492 CSGALNACT2Q8N6G5 542 aa16.65■□□□□ 0.26
CPSF1-211ENST00000533492 PJA1Q8NG27 643 aa16.65■□□□□ 0.26
CPSF1-211ENST00000533492 BORCS6Q96GS4 357 aa16.65■□□□□ 0.26
CPSF1-211ENST00000533492 ZSWIM3Q96MP5 696 aa16.65■□□□□ 0.26
CPSF1-211ENST00000533492 SEPT5Q99719 369 aaPredicted RBP16.65■□□□□ 0.26
CPSF1-211ENST00000533492 C7orf25Q9BPX7 421 aa16.65■□□□□ 0.26
CPSF1-211ENST00000533492 TRMT61BQ9BVS5 477 aaKnown RBP16.65■□□□□ 0.26
CPSF1-211ENST00000533492 BRD9Q9H8M2 597 aa16.65■□□□□ 0.26
CPSF1-211ENST00000533492 MAGEF1Q9HAY2 307 aa16.65■□□□□ 0.26
CPSF1-211ENST00000533492 PCDHA7Q9UN72 937 aa16.65■□□□□ 0.26
CPSF1-211ENST00000533492 A0A1W2PRU2 124 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 ZNF233A6NK53 670 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 HUS1O60921 280 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 MOSPD3O75425 235 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 SOAT2O75908 522 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 FGF19O95750 216 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 TMEM191BP0C7N4 346 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 NBL1P41271 181 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 RBP5P82980 135 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 SMARCB1Q12824 385 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 GRM2Q14416 872 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 VEPH1Q14D04 833 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 SURF1Q15526 300 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 TAF12Q16514 161 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 FAM26FQ5R3K3 315 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 TTC9BQ8N6N2 239 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 C1orf127Q8N9H9 656 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 GLIS3Q8NEA6 775 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 SHKBP1Q8TBC3 707 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 ZSCAN18Q8TBC5 510 aaPredicted RBP16.64■□□□□ 0.25
CPSF1-211ENST00000533492 C2orf15Q8WU43 125 aaKnown RBP16.64■□□□□ 0.25
CPSF1-211ENST00000533492 PSMG2Q969U7 264 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 ANKRD36BP1Q96IX9 119 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 DNAJC25Q9H1X3 360 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 ATXN3LQ9H3M9 355 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 PDE11AQ9HCR9 933 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 ITGA11Q9UKX5 1188 aa16.64■□□□□ 0.25
CPSF1-211ENST00000533492 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.63■□□□□ 0.25
CPSF1-211ENST00000533492 FAM170BA6NMN3 283 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 PROB1E7EW31 1015 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 NRG2O14511 850 aaPredicted RBP16.63■□□□□ 0.25
CPSF1-211ENST00000533492 EIF3DO15371 548 aaKnown RBP eCLIP16.63■□□□□ 0.25
CPSF1-211ENST00000533492 PSMC3P17980 439 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 FCARP24071 287 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 CDR1P51861 262 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 TSPY1Q01534 308 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 DNM1Q05193 864 aaKnown RBP16.63■□□□□ 0.25
CPSF1-211ENST00000533492 BFSP1Q12934 665 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 PKP1Q13835 747 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 CNNM4Q6P4Q7 775 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 TPRG1Q6ZUI0 275 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 UNC13DQ70J99 1090 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 TMC8Q8IU68 726 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 LRRC52Q8N7C0 313 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 ZNF507Q8TCN5 953 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 SPPL2BQ8TCT7 592 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 DNASE1L2Q92874 299 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 IRF7Q92985 503 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 E2F7Q96AV8 911 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 NELL2Q99435 816 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 DDX23Q9BUQ8 820 aaKnown RBP16.63■□□□□ 0.25
CPSF1-211ENST00000533492 LRRC3Q9BY71 257 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 BCO2Q9BYV7 579 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 KIAA1586Q9HCI6 787 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 ABI2Q9NYB9 513 aaPredicted RBP16.63■□□□□ 0.25
CPSF1-211ENST00000533492 GTF3C3Q9Y5Q9 886 aa16.63■□□□□ 0.25
CPSF1-211ENST00000533492 ZFHX2Q9C0A1 2572 aaPredicted RBP16.62■□□□□ 0.25
CPSF1-211ENST00000533492 NCAM2O15394 837 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 TNNC2P02585 160 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 CD72P21854 359 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 GABRR2P28476 465 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 GDI1P31150 447 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 VIPR2P41587 438 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 AFMP43652 599 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 MYL7Q01449 175 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 ARHGAP15Q53QZ3 475 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 RESP18Q5W5W9 173 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 VITQ6UXI7 678 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 ZNF852Q6ZMS4 543 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 FRMD5Q7Z6J6 570 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 LRRTM3Q86VH5 581 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 YAF2Q8IY57 180 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 CEP57L1Q8IYX8 460 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 PDCL2Q8N4E4 241 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 DEPDC1BQ8WUY9 529 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 NKD2Q969F2 451 aaPredicted RBP16.62■□□□□ 0.25
CPSF1-211ENST00000533492 OSBPL6Q9BZF3 934 aa16.62■□□□□ 0.25
CPSF1-211ENST00000533492 MTMR12Q9C0I1 747 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms