RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 ARHGAP1Q07960 439 aa20.43■□□□□ 0.86
UBXN1-215ENST00000533476 ZNF252P-AS1Q0IIN9 211 aa20.43■□□□□ 0.86
UBXN1-215ENST00000533476 FAM187BQ17R55 369 aa20.43■□□□□ 0.86
UBXN1-215ENST00000533476 PPP1R15BQ5SWA1 713 aa20.43■□□□□ 0.86
UBXN1-215ENST00000533476 C6orf118Q5T5N4 469 aa20.43■□□□□ 0.86
UBXN1-215ENST00000533476 SCARA5Q6ZMJ2 495 aa20.43■□□□□ 0.86
UBXN1-215ENST00000533476 ARMCX2Q7L311 632 aa20.43■□□□□ 0.86
UBXN1-215ENST00000533476 ARMC9Q7Z3E5 817 aa20.43■□□□□ 0.86
UBXN1-215ENST00000533476 RCOR2Q8IZ40 523 aa20.43■□□□□ 0.86
UBXN1-215ENST00000533476 CEP120Q8N960 986 aa20.43■□□□□ 0.86
UBXN1-215ENST00000533476 TFAP2BQ92481 460 aa20.43■□□□□ 0.86
UBXN1-215ENST00000533476 RBM41Q96IZ5 413 aaKnown RBP20.43■□□□□ 0.86
UBXN1-215ENST00000533476 L3MBTL3Q96JM7 780 aaPredicted RBP20.43■□□□□ 0.86
UBXN1-215ENST00000533476 ZNF668Q96K58 619 aaPredicted RBP20.43■□□□□ 0.86
UBXN1-215ENST00000533476 CCDC114Q96M63 670 aa20.43■□□□□ 0.86
UBXN1-215ENST00000533476 RPF1Q9H9Y2 349 aaKnown RBP20.43■□□□□ 0.86
UBXN1-215ENST00000533476 EFCC1Q9HA90 598 aa20.43■□□□□ 0.86
UBXN1-215ENST00000533476 AAASQ9NRG9 546 aa20.43■□□□□ 0.86
UBXN1-215ENST00000533476 CEP83Q9Y592 693 aa20.43■□□□□ 0.86
UBXN1-215ENST00000533476 ZNF394Q53GI3 561 aa20.42■□□□□ 0.86
UBXN1-215ENST00000533476 UBAP2Q5T6F2 1119 aaKnown RBP20.42■□□□□ 0.86
UBXN1-215ENST00000533476 ZNF473Q8WTR7 871 aaKnown RBP20.42■□□□□ 0.86
UBXN1-215ENST00000533476 GTF3C2Q8WUA4 911 aaPredicted RBP20.42■□□□□ 0.86
UBXN1-215ENST00000533476 FAXDC2Q96IV6 333 aa20.42■□□□□ 0.86
UBXN1-215ENST00000533476 MCEEQ96PE7 176 aa20.42■□□□□ 0.86
UBXN1-215ENST00000533476 CCT8L2Q96SF2 557 aa20.42■□□□□ 0.86
UBXN1-215ENST00000533476 RNPEPQ9H4A4 650 aa20.42■□□□□ 0.86
UBXN1-215ENST00000533476 TRAPPC3O43617 180 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 AGTP01019 485 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 CXCL8P10145 99 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 TMOD1P28289 359 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 GJA5P36382 358 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 GJC1P36383 396 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 SEC24CP53992 1094 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 OSTNP61366 133 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 NFX1Q12986 1120 aaKnown RBP20.41■□□□□ 0.86
UBXN1-215ENST00000533476 SNAPC2Q13487 334 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 LAMC2Q13753 1193 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 ANKS1BQ7Z6G8 1248 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 CCDC25Q86WR0 208 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 WDTC1Q8N5D0 677 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 ZBTB10Q96DT7 871 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 SCLT1Q96NL6 688 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 TRAIPQ9BWF2 469 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 BCO2Q9BYV7 579 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 MGAMO43451 1857 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 ANKRD65E5RJM6 399 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 E7EVH7 732 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 RGS16O15492 202 aaPredicted RBP20.41■□□□□ 0.86
UBXN1-215ENST00000533476 ERICH1Q86X53 443 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 IFNLR1Q8IU57 520 aaPredicted RBP20.41■□□□□ 0.86
UBXN1-215ENST00000533476 LINC01465Q8N7H1 131 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 NIPA2Q8N8Q9 360 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 BBOF1Q8ND07 529 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 SLITRK1Q96PX8 696 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 STMN4Q9H169 189 aaPredicted RBP20.41■□□□□ 0.86
UBXN1-215ENST00000533476 CDC42EP4Q9H3Q1 356 aaKnown RBP20.41■□□□□ 0.86
UBXN1-215ENST00000533476 IFT122Q9HBG6 1241 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 PNMA3Q9UL41 463 aa20.41■□□□□ 0.86
UBXN1-215ENST00000533476 MEFVO15553 781 aaPredicted RBP20.4■□□□□ 0.86
UBXN1-215ENST00000533476 LGALS2P05162 132 aa20.4■□□□□ 0.86
UBXN1-215ENST00000533476 IQCF3P0C7M6 154 aa20.4■□□□□ 0.86
UBXN1-215ENST00000533476 MCF2P10911 925 aa20.4■□□□□ 0.86
UBXN1-215ENST00000533476 INSRRP14616 1297 aa20.4■□□□□ 0.86
UBXN1-215ENST00000533476 EPHX2P34913 555 aa20.4■□□□□ 0.86
UBXN1-215ENST00000533476 PTPN7P35236 360 aa20.4■□□□□ 0.86
UBXN1-215ENST00000533476 ITGA8P53708 1063 aa20.4■□□□□ 0.86
UBXN1-215ENST00000533476 PIGHQ14442 188 aaPredicted RBP20.4■□□□□ 0.86
UBXN1-215ENST00000533476 DCUN1D2Q6PH85 259 aa20.4■□□□□ 0.86
UBXN1-215ENST00000533476 PACS2Q86VP3 889 aa20.4■□□□□ 0.86
UBXN1-215ENST00000533476 CDR2LQ86X02 465 aaPredicted RBP20.4■□□□□ 0.86
UBXN1-215ENST00000533476 TMEM192Q8IY95 271 aa20.4■□□□□ 0.86
UBXN1-215ENST00000533476 CENPTQ96BT3 561 aa20.4■□□□□ 0.86
UBXN1-215ENST00000533476 ROPN1BQ9BZX4 212 aaPredicted RBP20.4■□□□□ 0.86
UBXN1-215ENST00000533476 LHX5Q9H2C1 402 aa20.4■□□□□ 0.86
UBXN1-215ENST00000533476 ROPN1Q9HAT0 212 aaPredicted RBP20.4■□□□□ 0.86
UBXN1-215ENST00000533476 PPANQ9NQ55 473 aaKnown RBP20.4■□□□□ 0.86
UBXN1-215ENST00000533476 SIX4Q9UIU6 781 aa20.4■□□□□ 0.86
UBXN1-215ENST00000533476 STRIP2Q9ULQ0 834 aa20.4■□□□□ 0.86
UBXN1-215ENST00000533476 POLIQ9UNA4 740 aa20.4■□□□□ 0.86
UBXN1-215ENST00000533476 TLDC2A0PJX2 215 aa20.39■□□□□ 0.86
UBXN1-215ENST00000533476 GMNCA6NCL1 334 aa20.39■□□□□ 0.86
UBXN1-215ENST00000533476 GPR25O00155 361 aa20.39■□□□□ 0.86
UBXN1-215ENST00000533476 MAGEB2O15479 319 aa20.39■□□□□ 0.86
UBXN1-215ENST00000533476 MED7O43513 233 aa20.39■□□□□ 0.86
UBXN1-215ENST00000533476 KIAA0754O94854 1291 aa20.39■□□□□ 0.86
UBXN1-215ENST00000533476 KRT1P04264 644 aa20.39■□□□□ 0.86
UBXN1-215ENST00000533476 ADCY8P40145 1251 aa20.39■□□□□ 0.86
UBXN1-215ENST00000533476 COPS2P61201 443 aa20.39■□□□□ 0.86
UBXN1-215ENST00000533476 LACTBP83111 547 aaPredicted RBP20.39■□□□□ 0.86
UBXN1-215ENST00000533476 OGDHQ02218 1023 aa20.39■□□□□ 0.86
UBXN1-215ENST00000533476 TNFAIP2Q03169 654 aa20.39■□□□□ 0.86
UBXN1-215ENST00000533476 TRIP13Q15645 432 aaPredicted RBP20.39■□□□□ 0.86
UBXN1-215ENST00000533476 TNFAIP8L3Q5GJ75 292 aa20.39■□□□□ 0.86
UBXN1-215ENST00000533476 ZNF667Q5HYK9 610 aa20.39■□□□□ 0.86
UBXN1-215ENST00000533476 LDLRAD1Q5T700 205 aa20.39■□□□□ 0.86
UBXN1-215ENST00000533476 MFSD5Q6N075 450 aa20.39■□□□□ 0.86
UBXN1-215ENST00000533476 TAPT1Q6NXT6 567 aa20.39■□□□□ 0.86
UBXN1-215ENST00000533476 ZNF365Q70YC5 407 aa20.39■□□□□ 0.86
UBXN1-215ENST00000533476 CCDC89Q8N998 374 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms