RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 NKD2Q969F2 451 aaPredicted RBP17.55■□□□□ 0.4
CTSB-228ENST00000533455 BICD1Q96G01 975 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 CEP170P1Q96L14 293 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 TLE6Q9H808 572 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 VPS37BQ9H9H4 285 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 CORO1CQ9ULV4 474 aaPredicted RBP17.55■□□□□ 0.4
CTSB-228ENST00000533455 LRRC42Q9Y546 428 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 PCDHB4Q9Y5E5 795 aa17.55■□□□□ 0.4
CTSB-228ENST00000533455 MYH9P35579 1960 aaKnown RBP17.54■□□□□ 0.4
CTSB-228ENST00000533455 C2CD2LO14523 706 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 WDR46O15213 610 aaKnown RBP17.54■□□□□ 0.4
CTSB-228ENST00000533455 ZWINTO95229 277 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 KRT1P04264 644 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 KRT10P13645 584 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 RPS6P62753 249 aaKnown RBP17.54■□□□□ 0.4
CTSB-228ENST00000533455 HHATQ5VTY9 493 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 SPOPLQ6IQ16 392 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 MFSD7Q6UXD7 560 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 SPOCD1Q6ZMY3 1216 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 CENPUQ71F23 418 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 NAF1Q96HR8 494 aaKnown RBP17.54■□□□□ 0.4
CTSB-228ENST00000533455 FNBP1Q96RU3 617 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 TBC1D10AQ9BXI6 508 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 APOBEC3GQ9HC16 384 aaKnown RBP17.54■□□□□ 0.4
CTSB-228ENST00000533455 PCDH9Q9HC56 1237 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 PXMP2Q9NR77 195 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 KLHL11Q9NVR0 708 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 LNPEPQ9UIQ6 1025 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 PCDHA10Q9Y5I2 948 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 STYXL1Q9Y6J8 313 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 KIAA1217Q5T5P2 1943 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 CCDC189A1A4V9 331 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 TMEM191CA6NGB0 347 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 PI4K2BG5E9Z4 385 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 ZNF862O60290 1169 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 HNRNPCL1O60812 293 aaKnown RBP17.54■□□□□ 0.4
CTSB-228ENST00000533455 DGAT1O75907 488 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 NEBLO76041 1014 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 TMEM191BP0C7N4 346 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 MYCLP12524 364 aaPredicted RBP17.54■□□□□ 0.4
CTSB-228ENST00000533455 LMBRD2Q68DH5 695 aaPredicted RBP17.54■□□□□ 0.4
CTSB-228ENST00000533455 OTOAQ7RTW8 1153 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 TEX9Q8N6V9 391 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 RBBP8NLQ8NC74 664 aaPredicted RBP17.54■□□□□ 0.4
CTSB-228ENST00000533455 KCNN1Q92952 543 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 SLC38A10Q9HBR0 1119 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 XPNPEP1Q9NQW7 623 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 SAR1AQ9NR31 198 aa17.54■□□□□ 0.4
CTSB-228ENST00000533455 BRWD3Q6RI45 1802 aa17.53■□□□□ 0.4
CTSB-228ENST00000533455 ATP2A1O14983 1001 aa17.53■□□□□ 0.4
CTSB-228ENST00000533455 DKC1O60832 514 aaKnown RBP eCLIP17.53■□□□□ 0.44e-14■■■■■ 34
CTSB-228ENST00000533455 ITGAVP06756 1048 aa17.53■□□□□ 0.4
CTSB-228ENST00000533455 ASNSP08243 561 aa17.53■□□□□ 0.4
CTSB-228ENST00000533455 TPBGLP0DKB5 382 aa17.53■□□□□ 0.4
CTSB-228ENST00000533455 ETS1P14921 441 aa17.53■□□□□ 0.4
CTSB-228ENST00000533455 TNNI1P19237 187 aa17.53■□□□□ 0.4
CTSB-228ENST00000533455 TBXAS1P24557 533 aaPredicted RBP17.53■□□□□ 0.4
CTSB-228ENST00000533455 ABL2P42684 1182 aa17.53■□□□□ 0.4
CTSB-228ENST00000533455 WNT7BP56706 349 aa17.53■□□□□ 0.4
CTSB-228ENST00000533455 ATP13A4Q4VNC1 1196 aa17.53■□□□□ 0.4
CTSB-228ENST00000533455 FKBP1CQ5VVH2 108 aa17.53■□□□□ 0.4
CTSB-228ENST00000533455 CDCA2Q69YH5 1023 aaPredicted RBP17.53■□□□□ 0.4
CTSB-228ENST00000533455 TMEM270Q6UE05 265 aa17.53■□□□□ 0.4
CTSB-228ENST00000533455 NLRX1Q86UT6 975 aa17.53■□□□□ 0.4
CTSB-228ENST00000533455 LONP2Q86WA8 852 aa17.53■□□□□ 0.4
CTSB-228ENST00000533455 CCDC125Q86Z20 511 aa17.53■□□□□ 0.4
CTSB-228ENST00000533455 ZBED8Q8IZ13 594 aa17.53■□□□□ 0.4
CTSB-228ENST00000533455 CFAP61Q8NHU2 1237 aa17.53■□□□□ 0.4
CTSB-228ENST00000533455 KCNV2Q8TDN2 545 aa17.53■□□□□ 0.4
CTSB-228ENST00000533455 ZNF75CPQ92670 426 aaPredicted RBP17.53■□□□□ 0.4
CTSB-228ENST00000533455 MAK16Q9BXY0 300 aaKnown RBP17.53■□□□□ 0.4
CTSB-228ENST00000533455 RAVER2Q9HCJ3 691 aaKnown RBP17.53■□□□□ 0.4
CTSB-228ENST00000533455 PTPRJQ12913 1337 aa17.53■□□□□ 0.4
CTSB-228ENST00000533455 hCG_1818297A0A087WSY0 165 aa17.52■□□□□ 0.4
CTSB-228ENST00000533455 A0A1W2PPM1 405 aa17.52■□□□□ 0.4
CTSB-228ENST00000533455 TCRBV5S1A1TA0A578 114 aa17.52■□□□□ 0.4
CTSB-228ENST00000533455 H0YIN7 160 aa17.52■□□□□ 0.4
CTSB-228ENST00000533455 TCF4P15884 667 aa17.52■□□□□ 0.4
CTSB-228ENST00000533455 ATF7P17544 494 aaPredicted RBP17.52■□□□□ 0.4
CTSB-228ENST00000533455 MMP8P22894 467 aa17.52■□□□□ 0.4
CTSB-228ENST00000533455 LIG4P49917 911 aa17.52■□□□□ 0.4
CTSB-228ENST00000533455 ZNF252P-AS1Q0IIN9 211 aa17.52■□□□□ 0.4
CTSB-228ENST00000533455 DLGAP5Q15398 846 aa17.52■□□□□ 0.4
CTSB-228ENST00000533455 KAZNQ674X7 775 aa17.52■□□□□ 0.4
CTSB-228ENST00000533455 XRRA1Q6P2D8 792 aa17.52■□□□□ 0.4
CTSB-228ENST00000533455 LVRNQ6Q4G3 990 aa17.52■□□□□ 0.4
CTSB-228ENST00000533455 NLRP9Q7RTR0 991 aa17.52■□□□□ 0.4
CTSB-228ENST00000533455 CDAN1Q8IWY9 1227 aa17.52■□□□□ 0.4
CTSB-228ENST00000533455 CPXCR1Q8N123 301 aa17.52■□□□□ 0.4
CTSB-228ENST00000533455 ATP6V0A1Q93050 837 aa17.52■□□□□ 0.4
CTSB-228ENST00000533455 RMDN3Q96TC7 470 aa17.52■□□□□ 0.4
CTSB-228ENST00000533455 GABBR1Q9UBS5 961 aa17.52■□□□□ 0.4
CTSB-228ENST00000533455 FARP1Q9Y4F1 1045 aaPredicted RBP17.52■□□□□ 0.4
CTSB-228ENST00000533455 FGFR1P11362 822 aa17.52■□□□□ 0.39
CTSB-228ENST00000533455 GM2AP17900 193 aa17.52■□□□□ 0.39
CTSB-228ENST00000533455 PTPN4P29074 926 aa17.52■□□□□ 0.39
CTSB-228ENST00000533455 ZNF132P52740 706 aa17.52■□□□□ 0.39
CTSB-228ENST00000533455 GEMIN4P57678 1058 aaKnown RBP17.52■□□□□ 0.39
CTSB-228ENST00000533455 NLRP11P59045 1033 aaKnown RBP17.52■□□□□ 0.39
CTSB-228ENST00000533455 GPX6P59796 221 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms