RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 GOLGA6L22H0YM25 854 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 PSMA7O14818 248 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 OAZ2O95190 189 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 HNRNPA1P09651 372 aaKnown RBP eCLIP12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 PRCPP42785 496 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 TSPY1Q01534 308 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 ADAM9Q13443 819 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 SLC39A12Q504Y0 691 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 LILRA6Q6PI73 481 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 RNF19BQ6ZMZ0 732 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 C15orf39Q6ZRI6 1047 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 GET4Q7L5D6 327 aaPredicted RBP12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 TRAPPC11Q7Z392 1133 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 FAM186BQ8IYM0 893 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 ELMOD1Q8N336 334 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 LRRC52Q8N7C0 313 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 CMASQ8NFW8 434 aaPredicted RBP12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 ACSF2Q96CM8 615 aaPredicted RBP12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 EEF2KMTQ96G04 330 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 MFSD14AQ96MC6 490 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 GTPBP4Q9BZE4 634 aaKnown RBP12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 SIX4Q9UIU6 781 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 MAN1B1Q9UKM7 699 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 TRAF3IP3Q9Y228 551 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 DENND4AQ7Z401 1863 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 XIRP2A4UGR9 3374 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 CLUHO75153 1309 aa12.33□□□□□ -0.44
UBASH3B-208ENST00000533451 LRRIQ3A6PVS8 624 aaPredicted RBP12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 C1RP00736 705 aa12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 EPB41P11171 864 aaKnown RBP12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 TNNC1P63316 161 aa12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 MRPL58Q14197 206 aaKnown RBP12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 TPGS2Q68CL5 300 aa12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 SCARA3Q6AZY7 606 aa12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 OTOP3Q7RTS5 596 aa12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 GRASPQ7Z6J2 395 aaPredicted RBP12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 RNF135Q8IUD6 432 aa12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 SLC9A9Q8IVB4 645 aa12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 ADGRF2Q8IZF7 708 aa12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 PDCL2Q8N4E4 241 aa12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 FAM200AQ8TCP9 573 aa12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 ZNF707Q96C28 371 aaPredicted RBP12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 SEPT5Q99719 369 aaPredicted RBP12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 OXCT2Q9BYC2 517 aaPredicted RBP12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 L1RE1Q9UN81 338 aa12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 CTNND2Q9UQB3 1225 aa12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 PCDHGA4Q9Y5G9 962 aa12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 INSL5Q9Y5Q6 135 aa12.32□□□□□ -0.44
UBASH3B-208ENST00000533451 TRIM49BA6NDI0 452 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 C2CD4DB7Z1M9 353 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 CETN3O15182 167 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 ABLIM3O94929 683 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 SEC24AO95486 1093 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 CYP11A1P05108 521 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 NUDT7P0C024 238 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 TRIM49P0CI25 452 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 TRIM49CP0CI26 452 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 ATF2P15336 505 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 ACAT1P24752 427 aaKnown RBP12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 PSMC2P35998 433 aaKnown RBP12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 PIK3CAP42336 1068 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 VAMP7P51809 220 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 AP3M2P53677 418 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 MYL6P60660 151 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 DLG4P78352 724 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 NTHL1P78549 312 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 MYL7Q01449 175 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 MYBPC2Q14324 1141 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 UVSSAQ2YD98 709 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 ZNF699Q32M78 642 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 WDR72Q3MJ13 1102 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 TCERG1LQ5VWI1 586 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 SCARA5Q6ZMJ2 495 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 TMEM86AQ8N2M4 240 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 OR10T2Q8NGX3 314 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 PLEKHO2Q8TD55 490 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 TMEM209Q96SK2 561 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 DMAC2Q9NW81 257 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 DDX43Q9NXZ2 648 aaKnown RBP12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 ABI2Q9NYB9 513 aaPredicted RBP12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 NXF1Q9UBU9 619 aaKnown RBP12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 AFF4Q9UHB7 1163 aaKnown RBP12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 MUTYHQ9UIF7 546 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 C5orf42Q9H799 3197 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 MYO10Q9HD67 2058 aa12.31□□□□□ -0.44
UBASH3B-208ENST00000533451 LOC730098B7Z3J9 87 aa12.3□□□□□ -0.44
UBASH3B-208ENST00000533451 TBC1D4O60343 1298 aa12.3□□□□□ -0.44
UBASH3B-208ENST00000533451 AKAP3O75969 853 aa12.3□□□□□ -0.44
UBASH3B-208ENST00000533451 FSHRP23945 695 aa12.3□□□□□ -0.44
UBASH3B-208ENST00000533451 ALDH1A3P47895 512 aa12.3□□□□□ -0.44
UBASH3B-208ENST00000533451 GCLMP48507 274 aa12.3□□□□□ -0.44
UBASH3B-208ENST00000533451 TWF1Q12792 350 aa12.3□□□□□ -0.44
UBASH3B-208ENST00000533451 GPR17Q13304 367 aa12.3□□□□□ -0.44
UBASH3B-208ENST00000533451 NCOA4Q13772 614 aa12.3□□□□□ -0.44
UBASH3B-208ENST00000533451 TAF12Q16514 161 aa12.3□□□□□ -0.44
UBASH3B-208ENST00000533451 EDRF1Q3B7T1 1238 aa12.3□□□□□ -0.44
UBASH3B-208ENST00000533451 MGAT5BQ3V5L5 792 aa12.3□□□□□ -0.44
UBASH3B-208ENST00000533451 PABPC1LQ4VXU2 614 aaKnown RBP12.3□□□□□ -0.44
UBASH3B-208ENST00000533451 DCAF17Q5H9S7 520 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms