RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CRLF3Q8IUI8 442 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 ZNF507Q8TCN5 953 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 SLC5A5Q92911 643 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 SEC16BQ96JE7 1060 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 GORASP1Q9BQQ3 440 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 KLK14Q9P0G3 267 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 SIK3Q9Y2K2 1263 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 MAGEA4P43358 317 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 DLG4P78352 724 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 CAV1Q03135 178 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 SGSM1Q2NKQ1 1148 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 MIIPQ5JXC2 388 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 MEI1Q5TIA1 1274 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 ATF7IP2Q5U623 682 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 ARHGEF19Q8IW93 802 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 FAM71DQ8N9W8 422 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 PPP1R13LQ8WUF5 828 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 PDCD6IPQ8WUM4 868 aaKnown RBP12.85□□□□□ -0.35
BDNF-218ENST00000533246 DNAJC19Q96DA6 116 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 TTC1Q99614 292 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 ANKEF1Q9NU02 776 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 ZFP69BQ9UJL9 534 aa12.85□□□□□ -0.35
BDNF-218ENST00000533246 ARHGAP23Q9P227 1491 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 ITIH2P19823 946 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 TNFAIP2Q03169 654 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 KCNMA1Q12791 1236 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 TSEN2Q8NCE0 465 aaKnown RBP12.84□□□□□ -0.35
BDNF-218ENST00000533246 ATP6V1E2Q96A05 226 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 ARHGEF26Q96DR7 871 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 TSPYL2Q9H2G4 693 aaPredicted RBP12.84□□□□□ -0.35
BDNF-218ENST00000533246 ABCF3Q9NUQ8 709 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 TAS2R14Q9NYV8 317 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 CPSF3Q9UKF6 684 aaKnown RBP12.84□□□□□ -0.35
BDNF-218ENST00000533246 L3MBTL1Q9Y468 752 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 C19orf81C9J6K1 198 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 TRPA1O75762 1119 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 HSPA4LO95757 839 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 ITGB3P05106 788 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 SRGAP2BP0DMP2 458 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 TYK2P29597 1187 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 HSPA9P38646 679 aaKnown RBP12.84□□□□□ -0.35
BDNF-218ENST00000533246 ARFIP2P53365 341 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 BACE1P56817 501 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 ERVK-9P63128 1117 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 CDR2Q01850 454 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 CNTN2Q02246 1040 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 TMEM119Q4V9L6 283 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 HABP4Q5JVS0 413 aaKnown RBP12.84□□□□□ -0.35
BDNF-218ENST00000533246 JADE1Q6IE81 842 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 ACAD10Q6JQN1 1059 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 LRRC55Q6ZSA7 311 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 NUDCD3Q8IVD9 361 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 ZNF384Q8TF68 577 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 ECT2Q9H8V3 914 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 NPHS2Q9NP85 383 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 COQ9O75208 318 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 SLC1A1P43005 524 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 FEZF2Q8TBJ5 459 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 TRAPPC12Q8WVT3 735 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 TSPAN18Q96SJ8 248 aa12.84□□□□□ -0.35
BDNF-218ENST00000533246 RABL2AQ9UBK7 228 aaPredicted RBP12.84□□□□□ -0.35
BDNF-218ENST00000533246 TSR3Q9UJK0 312 aaKnown RBP12.84□□□□□ -0.35
BDNF-218ENST00000533246 SPECC1L-ADORA2AF8WAN1 911 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 EXTL3O43909 919 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 UPP2O95045 317 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 ATXN8OSP0DMR3 200 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 SERPINB4P48594 390 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 TRADDQ15628 312 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 KRT35Q92764 455 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 CLMNQ96JQ2 1002 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 NUDCD1Q96RS6 583 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 SIKE1Q9BRV8 207 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 GCOM2Q9BZD3 368 aaPredicted RBP12.83□□□□□ -0.36
BDNF-218ENST00000533246 A1CFQ9NQ94 594 aaKnown RBP12.83□□□□□ -0.36
BDNF-218ENST00000533246 REXO2Q9Y3B8 237 aaKnown RBP12.83□□□□□ -0.36
BDNF-218ENST00000533246 CYP2B6P20813 491 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 MYL6P60660 151 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 CDK17Q00537 523 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 KDSRQ06136 332 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 KLC1Q07866 573 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 MEA1Q16626 185 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 PTGISQ16647 500 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 GRAMD1BQ3KR37 738 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 ARL13BQ3SXY8 428 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 MOXD1Q6UVY6 613 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 RBM46Q8TBY0 533 aaKnown RBP12.83□□□□□ -0.36
BDNF-218ENST00000533246 DTX3LQ8TDB6 740 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 USP33Q8TEY7 942 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 PABPC3Q9H361 631 aaKnown RBP12.83□□□□□ -0.36
BDNF-218ENST00000533246 AIPL1Q9NZN9 384 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 SATB2Q9UPW6 733 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 TRAF3IP3Q9Y228 551 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 SLC4A7Q9Y6M7 1214 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 AGTP01019 485 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 SLC12A3P55017 1021 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 PPP3CAQ08209 521 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 CUL2Q13617 745 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 MXD4Q14582 209 aaPredicted RBP12.83□□□□□ -0.36
BDNF-218ENST00000533246 TMEM132DQ14C87 1099 aa12.83□□□□□ -0.36
BDNF-218ENST00000533246 CWF19L1Q69YN2 538 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms