RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 ZBTB9Q96C00 473 aa8.91□□□□□ -0.98
NEDD8-207ENST00000533242 NAP1L4Q99733 375 aaKnown RBP8.91□□□□□ -0.98
NEDD8-207ENST00000533242 KXD1Q9BQD3 176 aa8.91□□□□□ -0.98
NEDD8-207ENST00000533242 NFKBIZQ9BYH8 718 aa8.91□□□□□ -0.98
NEDD8-207ENST00000533242 TTYH3Q9C0H2 523 aa8.91□□□□□ -0.98
NEDD8-207ENST00000533242 SLC39A2Q9NP94 309 aa8.91□□□□□ -0.98
NEDD8-207ENST00000533242 XPNPEP1Q9NQW7 623 aa8.91□□□□□ -0.98
NEDD8-207ENST00000533242 MRPS17Q9Y2R5 130 aaKnown RBP8.91□□□□□ -0.98
NEDD8-207ENST00000533242 PSMA7O14818 248 aa8.9□□□□□ -0.98
NEDD8-207ENST00000533242 ECI2O75521 394 aa8.9□□□□□ -0.98
NEDD8-207ENST00000533242 AKAP5P24588 427 aa8.9□□□□□ -0.98
NEDD8-207ENST00000533242 TARSP26639 723 aaKnown RBP8.9□□□□□ -0.98
NEDD8-207ENST00000533242 ELAVL2Q12926 359 aaKnown RBP8.9□□□□□ -0.98
NEDD8-207ENST00000533242 CAPSQ13938 189 aa8.9□□□□□ -0.98
NEDD8-207ENST00000533242 PPP4R3AQ6IN85 833 aa8.9□□□□□ -0.98
NEDD8-207ENST00000533242 TPRG1Q6ZUI0 275 aa8.9□□□□□ -0.98
NEDD8-207ENST00000533242 DYMQ7RTS9 669 aa8.9□□□□□ -0.98
NEDD8-207ENST00000533242 KRT222Q8N1A0 295 aa8.9□□□□□ -0.98
NEDD8-207ENST00000533242 ASAP3Q8TDY4 903 aa8.9□□□□□ -0.98
NEDD8-207ENST00000533242 DYDC2Q96IM9 177 aa8.9□□□□□ -0.98
NEDD8-207ENST00000533242 AK8Q96MA6 479 aa8.9□□□□□ -0.98
NEDD8-207ENST00000533242 C7orf25Q9BPX7 421 aa8.9□□□□□ -0.98
NEDD8-207ENST00000533242 TUBGCP2Q9BSJ2 902 aa8.9□□□□□ -0.98
NEDD8-207ENST00000533242 PARP2Q9UGN5 583 aa8.9□□□□□ -0.98
NEDD8-207ENST00000533242 GMEB2Q9UKD1 530 aa8.9□□□□□ -0.98
NEDD8-207ENST00000533242 USP18Q9UMW8 372 aa8.9□□□□□ -0.98
NEDD8-207ENST00000533242 PDCD11Q14690 1871 aaKnown RBP8.9□□□□□ -0.99
NEDD8-207ENST00000533242 RCCD1A6NED2 376 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 EPHB6O15197 1021 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 TGM1P22735 817 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 ARL2P36404 184 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 RAB33AQ14088 237 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 CALCRLQ16602 461 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 FAM171A1Q5VUB5 890 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 TMTC1Q8IUR5 882 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 NPAS3Q8IXF0 933 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 RABGGTAQ92696 567 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 HAS1Q92839 578 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 CNOT6LQ96LI5 555 aaKnown RBP8.89□□□□□ -0.99
NEDD8-207ENST00000533242 IER2Q9BTL4 223 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 PARD6BQ9BYG5 372 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 THAP9Q9H5L6 903 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 ANKEF1Q9NU02 776 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 RGL1Q9NZL6 768 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 KLK14Q9P0G3 267 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 KMT2BQ9UMN6 2715 aaPredicted RBP8.89□□□□□ -0.99
NEDD8-207ENST00000533242 A0A1B0GUA9 196 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 NDUFA10O95299 355 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 LYPLA2O95372 231 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 CCNE1P24864 410 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 EEF1GP26641 437 aaKnown RBP8.89□□□□□ -0.99
NEDD8-207ENST00000533242 CTTNQ14247 550 aaKnown RBP8.89□□□□□ -0.99
NEDD8-207ENST00000533242 ST3GAL2Q16842 350 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 PABPC1LQ4VXU2 614 aaKnown RBP8.89□□□□□ -0.99
NEDD8-207ENST00000533242 NCAPH2Q6IBW4 605 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 ZNF852Q6ZMS4 543 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 SLC7A14Q8TBB6 771 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 DNASE1L2Q92874 299 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 DNAJC7Q99615 494 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 FGFBP2Q9BYJ0 223 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 AVENQ9NQS1 362 aaPredicted RBP8.89□□□□□ -0.99
NEDD8-207ENST00000533242 EXOC1Q9NV70 894 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 DNMT3BQ9UBC3 853 aaKnown RBP8.89□□□□□ -0.99
NEDD8-207ENST00000533242 POLIQ9UNA4 740 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 TICRRQ7Z2Z1 1910 aa8.89□□□□□ -0.99
NEDD8-207ENST00000533242 ZBTB39O15060 712 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 ADAM12O43184 909 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 B4GALT5O43286 388 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 KIF5CO60282 957 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 MARCH6O60337 910 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 DGAT1O75907 488 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 KIF4AO95239 1232 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 MYL1P05976 194 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 ADRB1P08588 477 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 CD72P21854 359 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 GLRA2P23416 452 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 NRLP54845 237 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 FZD5Q13467 585 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 CC2D1AQ6P1N0 951 aaPredicted RBP8.88□□□□□ -0.99
NEDD8-207ENST00000533242 MAMSTRQ6ZN01 415 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 CEP57Q86XR8 500 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 DHTKD1Q96HY7 919 aaPredicted RBP8.88□□□□□ -0.99
NEDD8-207ENST00000533242 PNKPQ96T60 521 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 PAAF1Q9BRP4 392 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 LACRTQ9GZZ8 138 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 ANKZF1Q9H8Y5 726 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 PARD6AQ9NPB6 346 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 HCFC1R1Q9NWW0 138 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 GDE1Q9NZC3 331 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 CACNG4Q9UBN1 327 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 LRWD1Q9UFC0 647 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 CAPN11Q9UMQ6 739 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 EPN1Q9Y6I3 576 aaPredicted RBP8.88□□□□□ -0.99
NEDD8-207ENST00000533242 DUSP10Q9Y6W6 482 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 CEP250Q9BV73 2442 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 TRIP11Q15643 1979 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 A0A1W2PQC6 194 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 DCDC2BA2VCK2 349 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 CASTOR2A6NHX0 329 aa8.88□□□□□ -0.99
NEDD8-207ENST00000533242 MAN2B1O00754 1011 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms