RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 MYO1EQ12965 1108 aa19.75■□□□□ 0.75
SMPD1-208ENST00000533123 FAM71AQ8IYT1 594 aa19.75■□□□□ 0.75
SMPD1-208ENST00000533123 LRRC52Q8N7C0 313 aa19.75■□□□□ 0.75
SMPD1-208ENST00000533123 NIF3L1Q9GZT8 377 aa19.75■□□□□ 0.75
SMPD1-208ENST00000533123 LTBP2Q14767 1821 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 TMCO5BA8MYB1 307 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 CYP26A1O43174 497 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 B4GALT3O60512 393 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 FGBP02675 491 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 CCDC172P0C7W6 258 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 RNASELQ05823 741 aaKnown RBP19.74■□□□□ 0.75
SMPD1-208ENST00000533123 TUSC3Q13454 348 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 FAM117BQ6P1L5 589 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 FMNL3Q8IVF7 1028 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 TXLNBQ8N3L3 684 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 MNS1Q8NEH6 495 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 TOP1MTQ969P6 601 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 VRTNQ9H8Y1 702 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 SEPT11Q9NVA2 429 aaKnown RBP19.74■□□□□ 0.75
SMPD1-208ENST00000533123 KANSL3Q9P2N6 904 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 CDC23Q9UJX2 597 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 MYH10P35580 1976 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 SPTLC1O15269 473 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 TACC1O75410 805 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 AMHP03971 560 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 WEE2P0C1S8 567 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 ASPAP45381 313 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 NAP1L1P55209 391 aaKnown RBP19.74■□□□□ 0.75
SMPD1-208ENST00000533123 SLC47A2Q86VL8 602 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 TRIM58Q8NG06 486 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 RNF216Q9NWF9 866 aaPredicted RBP19.74■□□□□ 0.75
SMPD1-208ENST00000533123 TAS2R14Q9NYV8 317 aa19.74■□□□□ 0.75
SMPD1-208ENST00000533123 TBKBP1A7MCY6 615 aa19.73■□□□□ 0.75
SMPD1-208ENST00000533123 ZBBXA8MT70 800 aa19.73■□□□□ 0.75
SMPD1-208ENST00000533123 PODXLO00592 558 aa19.73■□□□□ 0.75
SMPD1-208ENST00000533123 HOXA2O43364 376 aa19.73■□□□□ 0.75
SMPD1-208ENST00000533123 EFCAB14O75071 495 aa19.73■□□□□ 0.75
SMPD1-208ENST00000533123 BAIAP3O94812 1187 aa19.73■□□□□ 0.75
SMPD1-208ENST00000533123 STAU1O95793 577 aaKnown RBP19.73■□□□□ 0.75
SMPD1-208ENST00000533123 TBXAS1P24557 533 aaPredicted RBP19.73■□□□□ 0.75
SMPD1-208ENST00000533123 UPP1Q16831 310 aa19.73■□□□□ 0.75
SMPD1-208ENST00000533123 C10orf76Q5T2E6 689 aa19.73■□□□□ 0.75
SMPD1-208ENST00000533123 ENOSF1Q7L5Y1 443 aa19.73■□□□□ 0.75
SMPD1-208ENST00000533123 NOP9Q86U38 636 aaKnown RBP19.73■□□□□ 0.75
SMPD1-208ENST00000533123 C3orf58Q8NDZ4 430 aa19.73■□□□□ 0.75
SMPD1-208ENST00000533123 NOX5Q96PH1 765 aa19.73■□□□□ 0.75
SMPD1-208ENST00000533123 MMS19Q96T76 1030 aa19.73■□□□□ 0.75
SMPD1-208ENST00000533123 AGPAT1Q99943 283 aa19.73■□□□□ 0.75
SMPD1-208ENST00000533123 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.73■□□□□ 0.75
SMPD1-208ENST00000533123 SNX9Q9Y5X1 595 aa19.73■□□□□ 0.75
SMPD1-208ENST00000533123 SRGAP2O75044 1071 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 CD58P19256 250 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 RAP1GAPP47736 663 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 CDH8P55286 799 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 LILRA4P59901 499 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 PAN2Q504Q3 1202 aaKnown RBP19.72■□□□□ 0.75
SMPD1-208ENST00000533123 EPS8L1Q8TE68 723 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 FAM81BQ96LP2 452 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 SMYD3Q9H7B4 428 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 HCSTQ9UBK5 93 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 DNAJB4Q9UDY4 337 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 KPNA7A9QM74 516 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 DGKIO75912 1065 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 CALCAP01258 141 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 TNFAIP3P21580 790 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 RPL9P32969 192 aaKnown RBP19.72■□□□□ 0.75
SMPD1-208ENST00000533123 PNPLA4P41247 253 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 TAF6P49848 677 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 TNNC1P63316 161 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 TMEM240Q5SV17 173 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 TAF3Q5VWG9 929 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 ZNF560Q96MR9 790 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 FAM193BQ96PV7 902 aaPredicted RBP19.72■□□□□ 0.75
SMPD1-208ENST00000533123 ALS2CR12Q96Q35 445 aa19.72■□□□□ 0.75
SMPD1-208ENST00000533123 NOCTQ9UK39 431 aaKnown RBP19.72■□□□□ 0.75
SMPD1-208ENST00000533123 SPDYE4A6NLX3 237 aa19.71■□□□□ 0.75
SMPD1-208ENST00000533123 B3GAT3O94766 335 aa19.71■□□□□ 0.75
SMPD1-208ENST00000533123 ACO1P21399 889 aaKnown RBP19.71■□□□□ 0.75
SMPD1-208ENST00000533123 DSC1Q08554 894 aa19.71■□□□□ 0.75
SMPD1-208ENST00000533123 ELF2Q15723 593 aa19.71■□□□□ 0.75
SMPD1-208ENST00000533123 ERCC6LQ2NKX8 1250 aa19.71■□□□□ 0.75
SMPD1-208ENST00000533123 COLGALT2Q8IYK4 626 aa19.71■□□□□ 0.75
SMPD1-208ENST00000533123 RNF10Q8N5U6 811 aaKnown RBP19.71■□□□□ 0.75
SMPD1-208ENST00000533123 LBHD1Q9BQE6 289 aaPredicted RBP19.71■□□□□ 0.75
SMPD1-208ENST00000533123 SDCBP2Q9H190 292 aa19.71■□□□□ 0.75
SMPD1-208ENST00000533123 CXXC1Q9P0U4 656 aaPredicted RBP19.71■□□□□ 0.75
SMPD1-208ENST00000533123 FNDC1Q4ZHG4 1894 aaPredicted RBP19.71■□□□□ 0.75
SMPD1-208ENST00000533123 F8W810 466 aa19.71■□□□□ 0.75
SMPD1-208ENST00000533123 TADA3O75528 432 aa19.71■□□□□ 0.75
SMPD1-208ENST00000533123 H2AFZP0C0S5 128 aa19.71■□□□□ 0.75
SMPD1-208ENST00000533123 KRT5P13647 590 aa19.71■□□□□ 0.75
SMPD1-208ENST00000533123 PAPD7Q5XG87 772 aaKnown RBP19.71■□□□□ 0.75
SMPD1-208ENST00000533123 H2AFVQ71UI9 128 aa19.71■□□□□ 0.75
SMPD1-208ENST00000533123 HASPINQ8TF76 798 aa19.71■□□□□ 0.75
SMPD1-208ENST00000533123 BCO2Q9BYV7 579 aa19.71■□□□□ 0.75
SMPD1-208ENST00000533123 CISHQ9NSE2 258 aa19.71■□□□□ 0.75
SMPD1-208ENST00000533123 PUF60Q9UHX1 559 aaKnown RBP19.71■□□□□ 0.75
SMPD1-208ENST00000533123 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.71■□□□□ 0.75
SMPD1-208ENST00000533123 NCK2O43639 380 aa19.7■□□□□ 0.74
SMPD1-208ENST00000533123 PALMO75781 387 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms