RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 RSAD1Q9HA92 442 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 SLC24A3Q9HC58 644 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 TXLNGQ9NUQ3 528 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 SELENONQ9NZV5 590 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 APOBEC2Q9Y235 224 aaKnown RBP11.23□□□□□ -0.61
COLCA1-203ENST00000532918 KCNN4O15554 427 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 FGFR2P21802 821 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 PSEN2P49810 448 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 DHX34Q14147 1143 aaKnown RBP11.23□□□□□ -0.61
COLCA1-203ENST00000532918 DACT2Q5SW24 774 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 ZNF410Q86VK4 478 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 CCNYL1Q8N7R7 359 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 SYTL5Q8TDW5 730 aaPredicted RBP11.23□□□□□ -0.61
COLCA1-203ENST00000532918 P2RX7Q99572 595 aaKnown RBP11.23□□□□□ -0.61
COLCA1-203ENST00000532918 ASPSCR1Q9BZE9 553 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 EVA1BQ9NVM1 165 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.23□□□□□ -0.61
COLCA1-203ENST00000532918 UXTQ9UBK9 157 aaPredicted RBP11.23□□□□□ -0.61
COLCA1-203ENST00000532918 TRPV2Q9Y5S1 764 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 MYMKA6NI61 221 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 TMEM88BA6NKF7 163 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 TLR2O60603 784 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 PTGISQ16647 500 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 PTPN21Q16825 1174 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 ZC3H18Q86VM9 953 aaKnown RBP11.23□□□□□ -0.61
COLCA1-203ENST00000532918 C4orf19Q8IY42 314 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 NRBF2Q96F24 287 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 PAWRQ96IZ0 340 aaKnown RBP11.23□□□□□ -0.61
COLCA1-203ENST00000532918 MFSD1Q9H3U5 465 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 SCHIP1Q9P0W5 487 aaPredicted RBP11.23□□□□□ -0.61
COLCA1-203ENST00000532918 ZFATQ9P243 1243 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 VIL1P09327 827 aaKnown RBP11.23□□□□□ -0.61
COLCA1-203ENST00000532918 PDIA2Q13087 525 aaKnown RBP11.23□□□□□ -0.61
COLCA1-203ENST00000532918 HABP4Q5JVS0 413 aaKnown RBP11.23□□□□□ -0.61
COLCA1-203ENST00000532918 KCTD16Q68DU8 428 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 MMS22LQ6ZRQ5 1243 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 ADGRF2Q8IZF7 708 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 ADSSL1Q8N142 457 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 ATL2Q8NHH9 583 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 CEP70Q8NHQ1 597 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 TRIM55Q9BYV6 548 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 CHST12Q9NRB3 414 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 GIMAP4Q9NUV9 329 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 CAPN11Q9UMQ6 739 aa11.23□□□□□ -0.61
COLCA1-203ENST00000532918 PIK3R2O00459 728 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 VDRP11473 427 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 CKBP12277 381 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 TYK2P29597 1187 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 CCDC144BQ3MJ40 725 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 ST13P4Q8IZP2 240 aaPredicted RBP11.22□□□□□ -0.61
COLCA1-203ENST00000532918 CSGALNACT1Q8TDX6 532 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 MAML1Q92585 1016 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 TTC17Q96AE7 1141 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 AKT1S1Q96B36 256 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 ASS1P00966 412 aaKnown RBP11.22□□□□□ -0.61
COLCA1-203ENST00000532918 GEMIN4P57678 1058 aaKnown RBP11.22□□□□□ -0.61
COLCA1-203ENST00000532918 CES5AQ6NT32 575 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 NIPA1Q7RTP0 329 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 SH3GL3Q99963 347 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 AGO4Q9HCK5 861 aaKnown RBP11.22□□□□□ -0.61
COLCA1-203ENST00000532918 LIMA1Q9UHB6 759 aaKnown RBP11.22□□□□□ -0.61
COLCA1-203ENST00000532918 TTC7AQ9ULT0 858 aaPredicted RBP11.22□□□□□ -0.61
COLCA1-203ENST00000532918 LZTS3O60299 673 aaPredicted RBP11.22□□□□□ -0.61
COLCA1-203ENST00000532918 CCDC159P0C7I6 412 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 ALDH5A1P51649 535 aaPredicted RBP11.22□□□□□ -0.61
COLCA1-203ENST00000532918 FASTKD1Q53R41 847 aaKnown RBP11.22□□□□□ -0.61
COLCA1-203ENST00000532918 PTRHD1Q6GMV3 140 aaKnown RBP11.22□□□□□ -0.61
COLCA1-203ENST00000532918 GPAT2Q6NUI2 795 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 ZNF557Q8N988 423 aaPredicted RBP11.22□□□□□ -0.61
COLCA1-203ENST00000532918 ARHGEF26Q96DR7 871 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 CHAMP1Q96JM3 812 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 CEP19Q96LK0 163 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 G3BP2Q9UN86 482 aaKnown RBP11.22□□□□□ -0.61
COLCA1-203ENST00000532918 PLA2G4CQ9UP65 541 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 SLIT1O75093 1534 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 KCNA2P16389 499 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 MORF4L2Q15014 288 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 BOLA3Q53S33 107 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 RPRD1AQ96P16 312 aaPredicted RBP11.22□□□□□ -0.61
COLCA1-203ENST00000532918 MCEEQ96PE7 176 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 WDCPQ9H6R7 721 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 KLHL11Q9NVR0 708 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 PAIP2BQ9ULR5 123 aaKnown RBP11.22□□□□□ -0.61
COLCA1-203ENST00000532918 WDR91A4D1P6 747 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 ANXA9O76027 345 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 VTNP04004 478 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 MCF2P10911 925 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 HMOX2P30519 316 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 ATXN3P54252 364 aaPredicted RBP11.22□□□□□ -0.61
COLCA1-203ENST00000532918 KCNA1Q09470 495 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 PHKG1Q16816 387 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 KSR1Q8IVT5 923 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 CPA5Q8WXQ8 436 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 L3MBTL3Q96JM7 780 aaPredicted RBP11.22□□□□□ -0.61
COLCA1-203ENST00000532918 XPO6Q96QU8 1125 aaKnown RBP11.22□□□□□ -0.61
COLCA1-203ENST00000532918 LATS2Q9NRM7 1088 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 KRT82Q9NSB4 513 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 ARHGEF38Q9NXL2 777 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 HDAC6Q9UBN7 1215 aa11.22□□□□□ -0.61
COLCA1-203ENST00000532918 NOVA2Q9UNW9 492 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms