RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 LPIN3Q9BQK8 851 aa16.45■□□□□ 0.22
BRPF3-210ENST00000532538 PYM1Q9BRP8 204 aaKnown RBP16.45■□□□□ 0.22
BRPF3-210ENST00000532538 DNAJC25Q9H1X3 360 aa16.45■□□□□ 0.22
BRPF3-210ENST00000532538 RBM12Q9NTZ6 932 aaKnown RBP16.45■□□□□ 0.22
BRPF3-210ENST00000532538 DLL3Q9NYJ7 618 aa16.45■□□□□ 0.22
BRPF3-210ENST00000532538 DSEQ9UL01 958 aa16.45■□□□□ 0.22
BRPF3-210ENST00000532538 SHISA7A6NL88 538 aa16.44■□□□□ 0.22
BRPF3-210ENST00000532538 CYB561D2O14569 222 aa16.44■□□□□ 0.22
BRPF3-210ENST00000532538 VNN2O95498 520 aa16.44■□□□□ 0.22
BRPF3-210ENST00000532538 BMP15O95972 392 aa16.44■□□□□ 0.22
BRPF3-210ENST00000532538 CHRNB1P11230 501 aa16.44■□□□□ 0.22
BRPF3-210ENST00000532538 PAX3P23760 479 aa16.44■□□□□ 0.22
BRPF3-210ENST00000532538 AARSP49588 968 aaKnown RBP eCLIP16.44■□□□□ 0.22
BRPF3-210ENST00000532538 TAF6P49848 677 aa16.44■□□□□ 0.22
BRPF3-210ENST00000532538 CYP4F8P98187 520 aa16.44■□□□□ 0.22
BRPF3-210ENST00000532538 SATB1Q01826 763 aa16.44■□□□□ 0.22
BRPF3-210ENST00000532538 SLFN12LQ6IEE8 588 aa16.44■□□□□ 0.22
BRPF3-210ENST00000532538 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.44■□□□□ 0.22
BRPF3-210ENST00000532538 TMC8Q8IU68 726 aa16.44■□□□□ 0.22
BRPF3-210ENST00000532538 CELF5Q8N6W0 485 aaKnown RBP16.44■□□□□ 0.22
BRPF3-210ENST00000532538 GIPC2Q8TF65 315 aa16.44■□□□□ 0.22
BRPF3-210ENST00000532538 NOC3LQ8WTT2 800 aaKnown RBP16.44■□□□□ 0.22
BRPF3-210ENST00000532538 RAD54LQ92698 747 aa16.44■□□□□ 0.22
BRPF3-210ENST00000532538 PSMG2Q969U7 264 aa16.44■□□□□ 0.22
BRPF3-210ENST00000532538 THG1LQ9NWX6 298 aaKnown RBP16.44■□□□□ 0.22
BRPF3-210ENST00000532538 CPSF3Q9UKF6 684 aaKnown RBP16.44■□□□□ 0.22
BRPF3-210ENST00000532538 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.44■□□□□ 0.22
BRPF3-210ENST00000532538 NCANO14594 1321 aa16.44■□□□□ 0.22
BRPF3-210ENST00000532538 A0A0B4J269 797 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 CHURC1-FNTBB4DL54 471 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 SPECC1L-ADORA2AF8WAN1 911 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 PIGRP01833 764 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 KCNA4P22459 653 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 CDC25CP30307 473 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 LONP1P36776 959 aaKnown RBP16.43■□□□□ 0.22
BRPF3-210ENST00000532538 FNTBP49356 437 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 PON2Q15165 354 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 C8orf34Q49A92 452 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 ZC2HC1CQ53FD0 456 aaPredicted RBP16.43■□□□□ 0.22
BRPF3-210ENST00000532538 DGKKQ5KSL6 1271 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 LAIR1Q6GTX8 287 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 CEP68Q76N32 757 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 DYMQ7RTS9 669 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 SPEM1Q8N4L4 309 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 TTC16Q8NEE8 873 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 BPIFB1Q8TDL5 484 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 POMGNT1Q8WZA1 660 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 LARP4BQ92615 738 aaKnown RBP16.43■□□□□ 0.22
BRPF3-210ENST00000532538 NELL1Q92832 810 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 RSPRY1Q96DX4 576 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 LRRC3Q9BY71 257 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 DPP3Q9NY33 737 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 ABI2Q9NYB9 513 aaPredicted RBP16.43■□□□□ 0.22
BRPF3-210ENST00000532538 GTSE1Q9NYZ3 720 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 AGO2Q9UKV8 859 aaKnown RBP16.43■□□□□ 0.22
BRPF3-210ENST00000532538 DERAQ9Y315 318 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 OBSL1O75147 1896 aa16.43■□□□□ 0.22
BRPF3-210ENST00000532538 VPS37CA5D8V6 355 aaPredicted RBP16.42■□□□□ 0.22
BRPF3-210ENST00000532538 ANKRD63C9JTQ0 380 aa16.42■□□□□ 0.22
BRPF3-210ENST00000532538 ATXN1P54253 815 aaKnown RBP16.42■□□□□ 0.22
BRPF3-210ENST00000532538 FCHO2Q0JRZ9 810 aa16.42■□□□□ 0.22
BRPF3-210ENST00000532538 PTPAQ15257 358 aa16.42■□□□□ 0.22
BRPF3-210ENST00000532538 SF3A1Q15459 793 aaKnown RBP16.42■□□□□ 0.22
BRPF3-210ENST00000532538 GAREM2Q75VX8 874 aa16.42■□□□□ 0.22
BRPF3-210ENST00000532538 RALGPS2Q86X27 583 aaPredicted RBP16.42■□□□□ 0.22
BRPF3-210ENST00000532538 DCP1BQ8IZD4 617 aaKnown RBP16.42■□□□□ 0.22
BRPF3-210ENST00000532538 OR10T2Q8NGX3 314 aa16.42■□□□□ 0.22
BRPF3-210ENST00000532538 ASB7Q9H672 318 aa16.42■□□□□ 0.22
BRPF3-210ENST00000532538 TASP1Q9H6P5 420 aa16.42■□□□□ 0.22
BRPF3-210ENST00000532538 BLOC1S4Q9NUP1 217 aa16.42■□□□□ 0.22
BRPF3-210ENST00000532538 CCDC39Q9UFE4 941 aa16.42■□□□□ 0.22
BRPF3-210ENST00000532538 MAGED2Q9UNF1 606 aaPredicted RBP16.42■□□□□ 0.22
BRPF3-210ENST00000532538 SPAG17Q6Q759 2223 aa16.41■□□□□ 0.22
BRPF3-210ENST00000532538 DCDC2BA2VCK2 349 aa16.41■□□□□ 0.22
BRPF3-210ENST00000532538 PIRO00625 290 aa16.41■□□□□ 0.22
BRPF3-210ENST00000532538 FAM189A1O60320 539 aa16.41■□□□□ 0.22
BRPF3-210ENST00000532538 CTHP32929 405 aa16.41■□□□□ 0.22
BRPF3-210ENST00000532538 AVPR1AP37288 418 aa16.41■□□□□ 0.22
BRPF3-210ENST00000532538 MCM2P49736 904 aa16.41■□□□□ 0.22
BRPF3-210ENST00000532538 GTF2BQ00403 316 aa16.41■□□□□ 0.22
BRPF3-210ENST00000532538 PLCB2Q00722 1185 aa16.41■□□□□ 0.22
BRPF3-210ENST00000532538 TSPY1Q01534 308 aa16.41■□□□□ 0.22
BRPF3-210ENST00000532538 BFSP1Q12934 665 aa16.41■□□□□ 0.22
BRPF3-210ENST00000532538 SV2CQ496J9 727 aa16.41■□□□□ 0.22
BRPF3-210ENST00000532538 SLC39A4Q6P5W5 647 aa16.41■□□□□ 0.22
BRPF3-210ENST00000532538 ZNF687Q8N1G0 1237 aa16.41■□□□□ 0.22
BRPF3-210ENST00000532538 ZNF560Q96MR9 790 aa16.41■□□□□ 0.22
BRPF3-210ENST00000532538 RTKNQ9BST9 563 aa16.41■□□□□ 0.22
BRPF3-210ENST00000532538 ZCWPW1Q9H0M4 648 aa16.41■□□□□ 0.22
BRPF3-210ENST00000532538 SMG9Q9H0W8 520 aaKnown RBP16.41■□□□□ 0.22
BRPF3-210ENST00000532538 TISP43B9A030 160 aa16.4■□□□□ 0.22
BRPF3-210ENST00000532538 ARNTLO00327 626 aa16.4■□□□□ 0.22
BRPF3-210ENST00000532538 TXLNAP40222 546 aa16.4■□□□□ 0.22
BRPF3-210ENST00000532538 ZNF131P52739 623 aa16.4■□□□□ 0.22
BRPF3-210ENST00000532538 MLLT6P55198 1093 aaPredicted RBP16.4■□□□□ 0.22
BRPF3-210ENST00000532538 TFAMQ00059 246 aaKnown RBP16.4■□□□□ 0.22
BRPF3-210ENST00000532538 GRIN1Q05586 938 aa16.4■□□□□ 0.22
BRPF3-210ENST00000532538 TNK2Q07912 1038 aa16.4■□□□□ 0.22
BRPF3-210ENST00000532538 SRSF5Q13243 272 aaKnown RBP16.4■□□□□ 0.22
BRPF3-210ENST00000532538 POSTNQ15063 836 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms