RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 OTOP2Q7RTS6 562 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 ZDHHC17Q8IUH5 632 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 TRAPPC12Q8WVT3 735 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 ARHGAP39Q9C0H5 1083 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 BFARQ9NZS9 450 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 TRIM49BA6NDI0 452 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 SMIM23A6NLE4 172 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 EEF2KO00418 725 aaKnown RBP12.24□□□□□ -0.45
CSRP1-215ENST00000532313 PSMD10O75832 226 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 VCLP18206 1134 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 TUSC3Q13454 348 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 HELQQ8TDG4 1101 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 PAWRQ96IZ0 340 aaKnown RBP12.24□□□□□ -0.45
CSRP1-215ENST00000532313 SLC9A7Q96T83 725 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 WNT8AQ9H1J5 351 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 FAM105AQ9NUU6 356 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 PCDHA13Q9Y5I0 950 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 CFAP69A5D8W1 941 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 PTENP60484 403 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 IRX5P78411 483 aaPredicted RBP12.24□□□□□ -0.45
CSRP1-215ENST00000532313 PKN1Q16512 942 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 ANKRD40Q6AI12 368 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 SH3BP5LQ7L8J4 393 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 CDR2LQ86X02 465 aaPredicted RBP12.24□□□□□ -0.45
CSRP1-215ENST00000532313 NUP85Q9BW27 656 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 MTMR12Q9C0I1 747 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 KRT82Q9NSB4 513 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 ZNF510Q9Y2H8 683 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 PPP2R2CQ9Y2T4 447 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 CCDC66A2RUB6 948 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 DFFAO00273 331 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 MEIS2O14770 477 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 CYP24A1Q07973 514 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 NTRK3Q16288 839 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 NOP9Q86U38 636 aaKnown RBP12.24□□□□□ -0.45
CSRP1-215ENST00000532313 UNC93AQ86WB7 457 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 PIK3R5Q8WYR1 880 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 CYFIP2Q96F07 1278 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 RNPEPQ9H4A4 650 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 SYNDIG1Q9H7V2 258 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 KPNA7A9QM74 516 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 FTLP02792 175 aaPredicted RBP12.24□□□□□ -0.45
CSRP1-215ENST00000532313 CXCL8P10145 99 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 DARSP14868 501 aaKnown RBP12.24□□□□□ -0.45
CSRP1-215ENST00000532313 TM4SF4P48230 202 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 ZNF135P52742 658 aaPredicted RBP12.24□□□□□ -0.45
CSRP1-215ENST00000532313 CDH6P55285 790 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 RAPH1Q70E73 1250 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 UBXN6Q9BZV1 441 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 INTS13Q9NVM9 706 aa12.24□□□□□ -0.45
CSRP1-215ENST00000532313 BARX2Q9UMQ3 279 aaPredicted RBP12.24□□□□□ -0.45
CSRP1-215ENST00000532313 COL22A1Q8NFW1 1626 aaPredicted RBP12.23□□□□□ -0.45
CSRP1-215ENST00000532313 CYP26A1O43174 497 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 SMPD1P17405 629 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 GPD1P21695 349 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 RGS7P49802 495 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 SETDB1Q15047 1291 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 C4orf22Q6V702 233 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 RPRD1AQ96P16 312 aaPredicted RBP12.23□□□□□ -0.45
CSRP1-215ENST00000532313 CENPKQ9BS16 269 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 TTPALQ9BTX7 342 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 RHOXF2BP0C7M4 288 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 SCNN1GP51170 649 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 SOX10P56693 466 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 BYSLQ13895 437 aaKnown RBP12.23□□□□□ -0.45
CSRP1-215ENST00000532313 BOLA3Q53S33 107 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 SERPINB11Q96P15 392 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 RHOXF2Q9BQY4 288 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 CD2BP2O95400 341 aaKnown RBP12.23□□□□□ -0.45
CSRP1-215ENST00000532313 HIRAP54198 1017 aaPredicted RBP12.23□□□□□ -0.45
CSRP1-215ENST00000532313 ATP11AP98196 1134 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 P3H1Q32P28 736 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 OOSP2Q86WS3 158 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 MAP4K3Q8IVH8 894 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 ATL2Q8NHH9 583 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 PBXIP1Q96AQ6 731 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 C2CD2Q9Y426 696 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 SLC12A8A0AV02 714 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 LSM8O95777 96 aaKnown RBP12.23□□□□□ -0.45
CSRP1-215ENST00000532313 PDK1Q15118 436 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 WDCPQ9H6R7 721 aa12.23□□□□□ -0.45
CSRP1-215ENST00000532313 WEE2P0C1S8 567 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 AKAP5P24588 427 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 GRM5P41594 1212 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 VPS41P49754 854 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 RENBPP51606 427 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 PRAMEP78395 509 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 RNF10Q8N5U6 811 aaKnown RBP12.22□□□□□ -0.45
CSRP1-215ENST00000532313 PSMB7Q99436 277 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 PDGFCQ9NRA1 345 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 ZNF212Q9UDV6 495 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 CDH9Q9ULB4 789 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 ASS1P00966 412 aaKnown RBP12.22□□□□□ -0.45
CSRP1-215ENST00000532313 MDH1BQ5I0G3 518 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 GPAT2Q6NUI2 795 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 LEMD2Q8NC56 503 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 HASPINQ8TF76 798 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 SH3KBP1Q96B97 665 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 PPP1R13BQ96KQ4 1090 aa12.22□□□□□ -0.45
CSRP1-215ENST00000532313 GPR88Q9GZN0 384 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms