RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 AARSP49588 968 aaKnown RBP eCLIP16.13■□□□□ 0.17
SRPRA-206ENST00000532259 RAD23BP54727 409 aa16.13■□□□□ 0.17
SRPRA-206ENST00000532259 DNAJC21Q5F1R6 531 aaKnown RBP16.13■□□□□ 0.17
SRPRA-206ENST00000532259 CCDC137Q6PK04 289 aaKnown RBP16.13■□□□□ 0.17
SRPRA-206ENST00000532259 CCDC105Q8IYK2 499 aa16.13■□□□□ 0.17
SRPRA-206ENST00000532259 MSL3Q8N5Y2 521 aaKnown RBP16.13■□□□□ 0.17
SRPRA-206ENST00000532259 HPDLQ96IR7 371 aa16.13■□□□□ 0.17
SRPRA-206ENST00000532259 RUFY1Q96T51 708 aa16.13■□□□□ 0.17
SRPRA-206ENST00000532259 ELOVL4Q9GZR5 314 aa16.13■□□□□ 0.17
SRPRA-206ENST00000532259 SCN1AP35498 2009 aa16.13■□□□□ 0.17
SRPRA-206ENST00000532259 PI4K2BG5E9Z4 385 aa16.13■□□□□ 0.17
SRPRA-206ENST00000532259 CTNNA2P26232 953 aa16.13■□□□□ 0.17
SRPRA-206ENST00000532259 LMAN1P49257 510 aa16.13■□□□□ 0.17
SRPRA-206ENST00000532259 PSEN2P49810 448 aa16.13■□□□□ 0.17
SRPRA-206ENST00000532259 PDE4CQ08493 712 aa16.13■□□□□ 0.17
SRPRA-206ENST00000532259 KCTD16Q68DU8 428 aa16.13■□□□□ 0.17
SRPRA-206ENST00000532259 PLEKHA7Q6IQ23 1121 aa16.13■□□□□ 0.17
SRPRA-206ENST00000532259 ANKS1BQ7Z6G8 1248 aa16.13■□□□□ 0.17
SRPRA-206ENST00000532259 JAMLQ86YT9 394 aa16.13■□□□□ 0.17
SRPRA-206ENST00000532259 OR2W6PQ8NHA6 318 aa16.13■□□□□ 0.17
SRPRA-206ENST00000532259 C18orf25Q96B23 403 aaPredicted RBP16.13■□□□□ 0.17
SRPRA-206ENST00000532259 BCO2Q9BYV7 579 aa16.13■□□□□ 0.17
SRPRA-206ENST00000532259 MED4Q9NPJ6 270 aa16.13■□□□□ 0.17
SRPRA-206ENST00000532259 MBLAC1A4D2B0 266 aaPredicted RBP16.12■□□□□ 0.17
SRPRA-206ENST00000532259 RRN3P2A6NIE6 340 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 PHF2O75151 1096 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 PROSCO94903 275 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 ADAM17P78536 824 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 OGDHQ02218 1023 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 ZNF252P-AS1Q0IIN9 211 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 SIX1Q15475 284 aaPredicted RBP16.12■□□□□ 0.17
SRPRA-206ENST00000532259 SKIDA1Q1XH10 827 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 DCUN1D2Q6PH85 259 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 ZNF410Q86VK4 478 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 ERICH1Q86X53 443 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 TMEM35BQ8NCS4 154 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 RNF25Q96BH1 459 aaPredicted RBP16.12■□□□□ 0.17
SRPRA-206ENST00000532259 ASB7Q9H672 318 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 DPP3Q9NY33 737 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 KLK14Q9P0G3 267 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 TUBGCP4Q9UGJ1 667 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 GABRQQ9UN88 632 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 ZNF236Q9UL36 1845 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 F8VP50 259 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 RGS2P41220 211 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 PLTPP55058 493 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 TRIM32Q13049 653 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 CFAP58Q5T655 872 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 DNAJC24Q6P3W2 148 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 PAXIP1Q6ZW49 1069 aaPredicted RBP16.12■□□□□ 0.17
SRPRA-206ENST00000532259 GOLGA6L1Q8N7Z2 621 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 SLC4A11Q8NBS3 891 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 FEZF2Q8TBJ5 459 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 ARL8AQ96BM9 186 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 GCOM2Q9BZD3 368 aaPredicted RBP16.12■□□□□ 0.17
SRPRA-206ENST00000532259 RNF39Q9H2S5 420 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 MRPL47Q9HD33 250 aaKnown RBP16.12■□□□□ 0.17
SRPRA-206ENST00000532259 PARVAQ9NVD7 372 aa16.12■□□□□ 0.17
SRPRA-206ENST00000532259 C6orf222P0C671 652 aaPredicted RBP16.11■□□□□ 0.17
SRPRA-206ENST00000532259 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
SRPRA-206ENST00000532259 DMTNQ08495 405 aa16.11■□□□□ 0.17
SRPRA-206ENST00000532259 CUL1Q13616 776 aa16.11■□□□□ 0.17
SRPRA-206ENST00000532259 TRIP13Q15645 432 aaPredicted RBP16.11■□□□□ 0.17
SRPRA-206ENST00000532259 FSCN1Q16658 493 aaKnown RBP16.11■□□□□ 0.17
SRPRA-206ENST00000532259 KAZNQ674X7 775 aa16.11■□□□□ 0.17
SRPRA-206ENST00000532259 UBA3Q8TBC4 463 aa16.11■□□□□ 0.17
SRPRA-206ENST00000532259 APBA2Q99767 749 aa16.11■□□□□ 0.17
SRPRA-206ENST00000532259 CENPHQ9H3R5 247 aa16.11■□□□□ 0.17
SRPRA-206ENST00000532259 CHST7Q9NS84 486 aa16.11■□□□□ 0.17
SRPRA-206ENST00000532259 ABT1Q9ULW3 272 aaKnown RBP16.11■□□□□ 0.17
SRPRA-206ENST00000532259 BHMG1C9JSJ3 638 aaPredicted RBP16.11■□□□□ 0.17
SRPRA-206ENST00000532259 PGK1P00558 417 aa16.11■□□□□ 0.17
SRPRA-206ENST00000532259 RALAP11233 206 aa16.11■□□□□ 0.17
SRPRA-206ENST00000532259 DARSP14868 501 aaKnown RBP16.11■□□□□ 0.17
SRPRA-206ENST00000532259 PTPN20Q4JDL3 420 aa16.11■□□□□ 0.17
SRPRA-206ENST00000532259 TXNRD3NBQ6F5E7 133 aa16.11■□□□□ 0.17
SRPRA-206ENST00000532259 C12orf29Q8N999 325 aa16.11■□□□□ 0.17
SRPRA-206ENST00000532259 UBLCP1Q8WVY7 318 aaPredicted RBP16.11■□□□□ 0.17
SRPRA-206ENST00000532259 PIK3R5Q8WYR1 880 aa16.11■□□□□ 0.17
SRPRA-206ENST00000532259 DDX27Q96GQ7 796 aaKnown RBP16.11■□□□□ 0.17
SRPRA-206ENST00000532259 HEXIM2Q96MH2 286 aaKnown RBP16.11■□□□□ 0.17
SRPRA-206ENST00000532259 ERP44Q9BS26 406 aa16.11■□□□□ 0.17
SRPRA-206ENST00000532259 TRIM6Q9C030 488 aaPredicted RBP16.11■□□□□ 0.17
SRPRA-206ENST00000532259 ZFYVE28Q9HCC9 887 aa16.11■□□□□ 0.17
SRPRA-206ENST00000532259 R3HDM2Q9Y2K5 976 aaKnown RBP16.11■□□□□ 0.17
SRPRA-206ENST00000532259 TCRBV5S1A1TA0A578 114 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 HAS3O00219 553 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 HCRTO43612 131 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 EIF4BP23588 611 aaKnown RBP16.1■□□□□ 0.17
SRPRA-206ENST00000532259 GRM5P41594 1212 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 SGO2Q562F6 1265 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 SESTD1Q86VW0 696 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 SH2D3CQ8N5H7 860 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.1■□□□□ 0.17
SRPRA-206ENST00000532259 LPIN3Q9BQK8 851 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 AP5M1Q9H0R1 490 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 SYNCQ9H7C4 482 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 MTUS1Q9ULD2 1270 aa16.1■□□□□ 0.17
SRPRA-206ENST00000532259 PIN4Q9Y237 131 aaKnown RBP16.1■□□□□ 0.17
SRPRA-206ENST00000532259 CEP83Q9Y592 693 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms