RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 ZNF268Q14587 947 aaPredicted RBP13.05□□□□□ -0.32
CHD7-211ENST00000532149 ARHGEF6Q15052 776 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 CNGA2Q16280 664 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 FSCN1Q16658 493 aaKnown RBP13.05□□□□□ -0.32
CHD7-211ENST00000532149 CYP1B1Q16678 543 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 SLC10A6Q3KNW5 377 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 EEF1DP3Q658K8 133 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 PALB2Q86YC2 1186 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 C7orf31Q8N865 590 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 C12orf50Q8NA57 414 aaPredicted RBP13.05□□□□□ -0.32
CHD7-211ENST00000532149 SMC1BQ8NDV3 1235 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 FEZF2Q8TBJ5 459 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 SLCO2A1Q92959 643 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 CYFIP2Q96F07 1278 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 MS4A14Q96JA4 679 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 PSMB7Q99436 277 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 KRT12Q99456 494 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 SEZ6LQ9BYH1 1024 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 FRMD8P1Q9BZ68 369 aaPredicted RBP13.05□□□□□ -0.32
CHD7-211ENST00000532149 TRIM6Q9C030 488 aaPredicted RBP13.05□□□□□ -0.32
CHD7-211ENST00000532149 UPF3AQ9H1J1 476 aaKnown RBP13.05□□□□□ -0.32
CHD7-211ENST00000532149 CYLDQ9NQC7 956 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 DPP3Q9NY33 737 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 DDX56Q9NY93 547 aaKnown RBP13.05□□□□□ -0.32
CHD7-211ENST00000532149 ANAPC7Q9UJX3 599 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 BARX2Q9UMQ3 279 aaPredicted RBP13.05□□□□□ -0.32
CHD7-211ENST00000532149 UBQLN1Q9UMX0 589 aaKnown RBP13.05□□□□□ -0.32
CHD7-211ENST00000532149 EFR3BQ9Y2G0 817 aa13.05□□□□□ -0.32
CHD7-211ENST00000532149 ANK1P16157 1881 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 BHMG1C9JSJ3 638 aaPredicted RBP13.04□□□□□ -0.32
CHD7-211ENST00000532149 TLR3O15455 904 aaKnown RBP13.04□□□□□ -0.32
CHD7-211ENST00000532149 B4GALT5O43286 388 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 PHF2O75151 1096 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 CABYRO75952 493 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 IQCF3P0C7M6 154 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 ASPAP45381 313 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 NOGQ13253 232 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 WDR72Q3MJ13 1102 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 CFAP58Q5T655 872 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 NAA35Q5VZE5 725 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 LMBRD2Q68DH5 695 aaPredicted RBP13.04□□□□□ -0.32
CHD7-211ENST00000532149 JADE1Q6IE81 842 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 ILDR2Q71H61 639 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 DPH6Q7L8W6 267 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 POLNQ7Z5Q5 900 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 SESTD1Q86VW0 696 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 ERICH1Q86X53 443 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 ZDHHC17Q8IUH5 632 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 GPIHBP1Q8IV16 184 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 KATNAL2Q8IYT4 538 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 NIPA2Q8N8Q9 360 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 C1orf127Q8N9H9 656 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 C3orf20Q8ND61 904 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 EXD1Q8NHP7 514 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 CCHCR1Q8TD31 782 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 PTCD2Q8WV60 388 aaKnown RBP13.04□□□□□ -0.32
CHD7-211ENST00000532149 KAT2BQ92831 832 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 TMEM176AQ96HP8 235 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 HPDLQ96IR7 371 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 RBM41Q96IZ5 413 aaKnown RBP13.04□□□□□ -0.32
CHD7-211ENST00000532149 ZNF560Q96MR9 790 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 CFHR5Q9BXR6 569 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 NMRK2Q9NPI5 230 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 SETD4Q9NVD3 440 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 RALGAPA2Q2PPJ7 1873 aa13.04□□□□□ -0.32
CHD7-211ENST00000532149 CITO14578 2027 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 TMEM88BA6NKF7 163 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 FSCN2O14926 492 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 HSF2BPO75031 334 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 KRT19P08727 400 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 KCNE1P15382 129 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 WNT7BP56706 349 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 PTPN11Q06124 597 aaPredicted RBP13.03□□□□□ -0.32
CHD7-211ENST00000532149 MAMLD1Q13495 774 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 DSG2Q14126 1118 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 XKR4Q5GH76 650 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 GJC2Q5T442 439 aaPredicted RBP13.03□□□□□ -0.32
CHD7-211ENST00000532149 SPOPLQ6IQ16 392 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 SLC13A5Q86YT5 568 aaPredicted RBP13.03□□□□□ -0.32
CHD7-211ENST00000532149 PLPP6Q8IY26 295 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 RCOR2Q8IZ40 523 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 STK32AQ8WU08 396 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 RUFY1Q96T51 708 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 ARID3AQ99856 593 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 NT5C1AQ9BXI3 368 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 LRRC19Q9H756 370 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 EPB41L5Q9HCM4 733 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 CNTN3Q9P232 1028 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 DMGDHQ9UI17 866 aaKnown RBP13.03□□□□□ -0.32
CHD7-211ENST00000532149 PACSIN2Q9UNF0 486 aaPredicted RBP13.03□□□□□ -0.32
CHD7-211ENST00000532149 SQORQ9Y6N5 450 aa13.03□□□□□ -0.32
CHD7-211ENST00000532149 CASP8AP2Q9UKL3 1982 aa13.02□□□□□ -0.32
CHD7-211ENST00000532149 TMEM191CA6NGB0 347 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 SIGLEC16A6NMB1 481 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 FAM155AB1AL88 458 aaPredicted RBP13.02□□□□□ -0.33
CHD7-211ENST00000532149 SEPT4O43236 478 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 CAND2O75155 1236 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 CILPO75339 1184 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 ITGB3P05106 788 aa13.02□□□□□ -0.33
CHD7-211ENST00000532149 KRT7P08729 469 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms