RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 HAUS6Q7Z4H7 955 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 ZNF280BQ86YH2 543 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 FAM178BQ8IXR5 827 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 ZNF295-AS1Q8N0V1 137 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 SLC39A11Q8N1S5 342 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 AFAP1L2Q8N4X5 818 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 KDF1Q8NAX2 398 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 SLC17A8Q8NDX2 589 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 GLIS3Q8NEA6 775 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 SPPL3Q8TCT6 385 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 LEO1Q8WVC0 666 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 POF1BQ8WVV4 589 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 MRPS27Q92552 414 aaKnown RBP6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 E2F7Q96AV8 911 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 DHX58Q96C10 678 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 BICD1Q96G01 975 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 CHAMP1Q96JM3 812 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 MRGPRX2Q96LB1 330 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 ZFP42Q96MM3 310 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 ACO2Q99798 780 aaKnown RBP6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 PYM1Q9BRP8 204 aaKnown RBP6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 TARS2Q9BW92 718 aaKnown RBP6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 SCAND2PQ9GZW5 306 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 GBP3Q9H0R5 595 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 TNMDQ9H2S6 317 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 CUEDC2Q9H467 287 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 AASDHPPTQ9NRN7 309 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 SPG21Q9NZD8 308 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 ANKFY1Q9P2R3 1169 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 SEL1LQ9UBV2 794 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 INTUQ9ULD6 942 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 KCNH3Q9ULD8 1083 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 TBX20Q9UMR3 447 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 TLR6Q9Y2C9 796 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 SPEF1Q9Y4P9 236 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 GBF1Q92538 1859 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 TTC3P53804 2025 aa6.3□□□□□ -1.4
HMGB1P42-201ENST00000532126 NT5C1B-RDH14C9J2C7 533 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 HNRNPDLO14979 420 aaKnown RBP6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 INPPL1O15357 1258 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 CLDN3O15551 220 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 TOM1L1O75674 476 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 DDHD2O94830 711 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 ALDH2P05091 517 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 GALTP07902 379 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 MCF2P10911 925 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 HARSP12081 509 aaKnown RBP6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 PROZP22891 400 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 CMA1P23946 247 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 NMT1P30419 496 aaKnown RBP6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 ANP32AP39687 249 aaKnown RBP6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 MATR3P43243 847 aaKnown RBP eCLIP6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 OR1G1P47890 313 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 SLC11A1P49279 550 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 LIG4P49917 911 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 IDH3AP50213 366 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 SCNN1GP51170 649 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 YARSP54577 528 aaKnown RBP6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 OSTNP61366 133 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 NNTQ13423 1086 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 CAMK1Q14012 370 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 MPP2Q14168 576 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 CTC1Q2NKJ3 1217 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 INO80DQ53TQ3 878 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 HERC4Q5GLZ8 1057 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 TCEAL5Q5H9L2 206 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 L1TD1Q5T7N2 865 aaKnown RBP6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 ACBD5Q5T8D3 534 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 RNF219Q5W0B1 726 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 ADALQ6DHV7 355 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 MPZL3Q6UWV2 235 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 ZBTB46Q86UZ6 589 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 SFR1Q86XK3 245 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 TRIM42Q8IWZ5 723 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 CCDC65Q8IXS2 484 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 CEP57L1Q8IYX8 460 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 TEX19Q8NA77 164 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 RHBDD1Q8TEB9 315 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 STAMQ92783 540 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 KCNN1Q92952 543 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 PPP2R3CQ969Q6 453 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 DNAJC19Q96DA6 116 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 TMEM169Q96HH4 297 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 TMEM175Q9BSA9 504 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 CCDC94Q9BW85 323 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 CDT1Q9H211 546 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 ST6GALNAC4Q9H4F1 302 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 NSUN3Q9H649 340 aaKnown RBP6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 NRDE2Q9H7Z3 1164 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 MRPL44Q9H9J2 332 aaKnown RBP6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 MAGEF1Q9HAY2 307 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 PTPRHQ9HD43 1115 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 PRDM6Q9NQX0 595 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 TLR9Q9NR96 1032 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 TOPORSQ9NS56 1045 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 PANK4Q9NVE7 773 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 DNAJB4Q9UDY4 337 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 LZTS1Q9Y250 596 aa6.29□□□□□ -1.4
HMGB1P42-201ENST00000532126 GDAQ9Y2T3 454 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms