RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	TOR1AIP1	Q5JTV8	583 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	ANGEL2	Q5VTE6	544 aa	Known RBP	5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	GARNL3	Q5VVW2	1013 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	FSTL4	Q6MZW2	842 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	MFSD5	Q6N075	450 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	CAVIN1	Q6NZI2	390 aa	Known RBP	5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	TRAT1	Q6PIZ9	186 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	PET117	Q6UWS5	81 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	ATF7IP	Q6VMQ6	1270 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	MRPL41	Q8IXM3	137 aa	Known RBP	5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	ZZZ3	Q8IYH5	903 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	AOPEP	Q8N6M6	819 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	GLIS1	Q8NBF1	620 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	SPATA20	Q8TB22	786 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	FATE1	Q969F0	183 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	PGAP3	Q96FM1	320 aa	Predicted RBP	5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	RAX2	Q96IS3	184 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	REEP2	Q9BRK0	252 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	FTO	Q9C0B1	505 aa	Known RBP eCLIP	5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	REXO4	Q9GZR2	422 aa	Known RBP	5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	CRISPLD1	Q9H336	500 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	TASP1	Q9H6P5	420 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	SMURF1	Q9HCE7	757 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	PDE11A	Q9HCR9	933 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	KRT82	Q9NSB4	513 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	PI4KB	Q9UBF8	816 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	AFF4	Q9UHB7	1163 aa	Known RBP	5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	NAALADL1	Q9UQQ1	740 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	KLHL20	Q9Y2M5	609 aa		5.63	□□□□□ -1.51
ECHDC1-222	ENST00000531967	CCDC151	A5D8V7	595 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967		H3BUI4	141 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	KIF2A	O00139	706 aa	Predicted RBP	5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	SLC16A6	O15403	523 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	SIAH2	O43255	324 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	ACTL6B	O94805	426 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	METTL18	O95568	372 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	LRG1	P02750	347 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	ANXA2	P07355	339 aa	Known RBP	5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	TMEM253	P0C7T8	217 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	LTBR	P36941	435 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	ZBTB17	Q13105	803 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	DEPDC1	Q5TB30	811 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	THEMIS2	Q5TEJ8	643 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	SAMD5	Q5TGI4	173 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	TPGS2	Q68CL5	300 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	IKBIP	Q70UQ0	350 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	CCDC103	Q8IW40	242 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	SCN4B	Q8IWT1	228 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	GPR150	Q8NGU9	434 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	NEDD1	Q8NHV4	660 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	TSPEAR	Q8WU66	669 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	COPS5	Q92905	334 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	SIPA1	Q96FS4	1042 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	TWSG1	Q9GZX9	223 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	SEMA4A	Q9H3S1	761 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	NRIP3	Q9NQ35	241 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	GPATCH2	Q9NW75	528 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	AATF	Q9NY61	560 aa	Known RBP eCLIP	5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	NOSIP	Q9Y314	301 aa	Known RBP	5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	CFAP20	Q9Y6A4	193 aa	Known RBP	5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	CCDC88B	A6NC98	1476 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	IL16	Q14005	1332 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	ZNF561-AS1	K7EIQ3	104 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	FCHO1	O14526	889 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	PGRMC2	O15173	223 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	IPO7	O95373	1038 aa	Known RBP	5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	GGPS1	O95749	300 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	PNP	P00491	289 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	PDE6A	P16499	860 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	IL10	P22301	178 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	PSMA4	P25789	261 aa	Known RBP	5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	TPP2	P29144	1249 aa	Predicted RBP	5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	GCH1	P30793	250 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	GRK5	P34947	590 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	PSMB10	P40306	273 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	MTIF2	P46199	727 aa	Known RBP	5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	HK3	P52790	923 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	POLE2	P56282	527 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	RPS16	P62249	146 aa	Known RBP	5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	HERVK_113	P62684	666 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	ERVK-24	P63145	666 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	RPA4	Q13156	261 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	ADAM9	Q13443	819 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	TESK1	Q15569	626 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	ARHGAP11A	Q6P4F7	1023 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	GATAD2A	Q86YP4	633 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	TDRD5	Q8NAT2	981 aa	Known RBP	5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	OR6C4	Q8NGE1	309 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	SCAMP5	Q8TAC9	235 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	GIMAP5	Q96F15	307 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	SNX22	Q96L94	193 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	LENG8	Q96PV6	779 aa	Predicted RBP	5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	PRPF18	Q99633	342 aa	Known RBP	5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	TXN2	Q99757	166 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	ACPT	Q9BZG2	426 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	GPRC5C	Q9NQ84	441 aa		5.62	□□□□□ -1.51
ECHDC1-222	ENST00000531967	PRDM8	Q9NQV8	689 aa		5.62	□□□□□ -1.51

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