RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 MKNK1Q9BUB5 465 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 CDH22Q9UJ99 828 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 SORCS3Q9UPU3 1222 aa11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 TIMM13Q9Y5L4 95 aaPredicted RBP11.64□□□□□ -0.55
GPATCH4-216ENST00000531900 MUC6Q6W4X9 2439 aa11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 GABRDO14764 452 aa11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 VNN2O95498 520 aa11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 CST3P01034 146 aaPredicted RBP11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 C4BPAP04003 597 aaKnown RBP11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 DLATP10515 647 aaKnown RBP11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 TNNI1P19237 187 aa11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 NR2F2P24468 414 aa11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 CASP4P49662 377 aa11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 LRRC63Q05C16 580 aa11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 MYO1EQ12965 1108 aa11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 ADAM9Q13443 819 aa11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 MORC3Q14149 939 aa11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 PPM1LQ5SGD2 360 aa11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 INTS8Q75QN2 995 aaKnown RBP11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 OTOP3Q7RTS5 596 aa11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 FBXL6Q8N531 539 aa11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 FEZF2Q8TBJ5 459 aa11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 C2orf15Q8WU43 125 aaKnown RBP11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 SMG7Q92540 1137 aaKnown RBP11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 CCDC127Q96BQ5 260 aa11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 DHTKD1Q96HY7 919 aaPredicted RBP11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 ACBD6Q9BR61 282 aa11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 ZCWPW1Q9H0M4 648 aa11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 MAPK8IP1Q9UQF2 711 aa11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 FRMD4BQ9Y2L6 1034 aa11.63□□□□□ -0.55
GPATCH4-216ENST00000531900 LRRIQ3A6PVS8 624 aaPredicted RBP11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 HUS1O60921 280 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 XYLBO75191 536 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 AKAP3O75969 853 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 SEC24AO95486 1093 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 BMP6P22004 513 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 HOXD11P31277 338 aaPredicted RBP11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 ATICP31939 592 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 PSMC2P35998 433 aaKnown RBP11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 LHX1P48742 406 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 ZACNQ401N2 412 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 C1orf220Q5T0J3 134 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 WSCD1Q658N2 575 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 LMBRD2Q68DH5 695 aaPredicted RBP11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 METTL23Q86XA0 190 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 SMYD4Q8IYR2 804 aaPredicted RBP11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 THEM5Q8N1Q8 247 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 PDCL2Q8N4E4 241 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 TRIML1Q8N9V2 468 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 OR10T2Q8NGX3 314 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 SLC7A14Q8TBB6 771 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 NOC3LQ8WTT2 800 aaKnown RBP11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 ASIC4Q96FT7 647 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 HPDLQ96IR7 371 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 FAM84AQ96KN4 292 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 XYLT2Q9H1B5 865 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 LIMD1Q9UGP4 676 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 MAN1B1Q9UKM7 699 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 L1RE1Q9UN81 338 aa11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 ZFP37Q9Y6Q3 630 aaPredicted RBP11.62□□□□□ -0.55
GPATCH4-216ENST00000531900 CLUHO75153 1309 aa11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 PPP1R3GB7ZBB8 358 aa11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 CETN3O15182 167 aa11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 TACC1O75410 805 aa11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 MICAL2O94851 1124 aa11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 KRT19P08727 400 aa11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 CCNE1P24864 410 aa11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 ELF1P32519 619 aa11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 EPHA5P54756 1037 aa11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 FKBP3Q00688 224 aaKnown RBP11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 ADCY1Q08828 1119 aa11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 SOWAHAQ2M3V2 549 aa11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 TDRD10Q5VZ19 366 aaKnown RBP11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 RNF19BQ6ZMZ0 732 aa11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 TAF4BQ92750 862 aa11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 ERCC4Q92889 916 aaPredicted RBP11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 PKMYT1Q99640 499 aa11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 LMBRD1Q9NUN5 540 aa11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 KIAA1468Q9P260 1216 aa11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 EPS15L1Q9UBC2 864 aa11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 R3HCC1Q9Y3T6 440 aaKnown RBP11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 INSL5Q9Y5Q6 135 aa11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 SNX9Q9Y5X1 595 aa11.61□□□□□ -0.55
GPATCH4-216ENST00000531900 ZDBF2Q9HCK1 2354 aa11.6□□□□□ -0.55
GPATCH4-216ENST00000531900 MTMR11A4FU01 709 aa11.6□□□□□ -0.55
GPATCH4-216ENST00000531900 PRRG1O14668 218 aa11.6□□□□□ -0.55
GPATCH4-216ENST00000531900 PSMA7O14818 248 aa11.6□□□□□ -0.55
GPATCH4-216ENST00000531900 SLC16A3O15427 465 aaKnown RBP11.6□□□□□ -0.55
GPATCH4-216ENST00000531900 N4BP1O75113 896 aaKnown RBP11.6□□□□□ -0.55
GPATCH4-216ENST00000531900 CPB1P15086 417 aa11.6□□□□□ -0.55
GPATCH4-216ENST00000531900 CD44P16070 742 aaKnown RBP11.6□□□□□ -0.55
GPATCH4-216ENST00000531900 PTPN2P17706 415 aa11.6□□□□□ -0.55
GPATCH4-216ENST00000531900 WARSP23381 471 aaKnown RBP11.6□□□□□ -0.55
GPATCH4-216ENST00000531900 GTF2H1P32780 548 aa11.6□□□□□ -0.55
GPATCH4-216ENST00000531900 VAMP7P51809 220 aa11.6□□□□□ -0.55
GPATCH4-216ENST00000531900 PTPN5P54829 565 aa11.6□□□□□ -0.55
GPATCH4-216ENST00000531900 DLG4P78352 724 aa11.6□□□□□ -0.55
GPATCH4-216ENST00000531900 NHLH1Q02575 133 aa11.6□□□□□ -0.55
GPATCH4-216ENST00000531900 BFSP1Q12934 665 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms