RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 XYLT2Q9H1B5 865 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 POMKQ9H5K3 350 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 MMRN2Q9H8L6 949 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 ZDHHC7Q9NXF8 308 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 NOTCH4Q99466 2003 aa12.76□□□□□ -0.37
LTBP3-219ENST00000530990 IKBKBO14920 756 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 HCRTO43612 131 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 HUS1O60921 280 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 CLSTN1O94985 981 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 PAPLNO95428 1278 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 SEC24AO95486 1093 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 VNN2O95498 520 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 STAU1O95793 577 aaKnown RBP12.75□□□□□ -0.37
LTBP3-219ENST00000530990 MBD3O95983 291 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 ATF2P15336 505 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 PIK3CAP42336 1068 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 GCLMP48507 274 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 ZP2Q05996 745 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 ENPEPQ07075 957 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 ADCY1Q08828 1119 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 NCOA4Q13772 614 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 ZNF699Q32M78 642 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 DPCR1Q3MIW9 517 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 DCAF17Q5H9S7 520 aaPredicted RBP12.75□□□□□ -0.37
LTBP3-219ENST00000530990 PPM1LQ5SGD2 360 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 TPGS2Q68CL5 300 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 FOXR2Q6PJQ5 311 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 C15orf39Q6ZRI6 1047 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 LIMS2Q7Z4I7 341 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 OSTM1Q86WC4 334 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 KBTBD7Q8WVZ9 684 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 SMG7Q92540 1137 aaKnown RBP12.75□□□□□ -0.37
LTBP3-219ENST00000530990 SYAP1Q96A49 352 aaPredicted RBP12.75□□□□□ -0.37
LTBP3-219ENST00000530990 RIPOR3Q96MK2 946 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 CEP63Q96MT8 703 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 UHRF1Q96T88 793 aaPredicted RBP12.75□□□□□ -0.37
LTBP3-219ENST00000530990 ZCWPW1Q9H0M4 648 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 AFF4Q9UHB7 1163 aaKnown RBP12.75□□□□□ -0.37
LTBP3-219ENST00000530990 POLIQ9UNA4 740 aa12.75□□□□□ -0.37
LTBP3-219ENST00000530990 DOCK8Q8NF50 2099 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 MTMR11A4FU01 709 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 PRRG1O14668 218 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 CCL16O15467 120 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 HLA-DRAP01903 254 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 SP100P23497 879 aaPredicted RBP12.74□□□□□ -0.37
LTBP3-219ENST00000530990 ACAT1P24752 427 aaKnown RBP12.74□□□□□ -0.37
LTBP3-219ENST00000530990 HOXA9P31269 272 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 ATICP31939 592 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 MTHFRP42898 656 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 CDR1P51861 262 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 MCCD1P59942 119 aaPredicted RBP12.74□□□□□ -0.37
LTBP3-219ENST00000530990 TNNC1P63316 161 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 GPR17Q13304 367 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 WDR72Q3MJ13 1102 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 SLC39A12Q504Y0 691 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 TCERG1LQ5VWI1 586 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 RBM43Q6ZSC3 357 aaKnown RBP12.74□□□□□ -0.37
LTBP3-219ENST00000530990 CCDC149Q6ZUS6 474 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 ADHFE1Q8IWW8 467 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 THEM5Q8N1Q8 247 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 TMEM86AQ8N2M4 240 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 TTC9BQ8N6N2 239 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 TAS1R2Q8TE23 839 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 NECTIN4Q96NY8 510 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 MED15Q96RN5 788 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 MMS19Q96T76 1030 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 PHF7Q9BWX1 381 aaPredicted RBP12.74□□□□□ -0.37
LTBP3-219ENST00000530990 PRKD2Q9BZL6 878 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 CRISPLD1Q9H336 500 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 VRTNQ9H8Y1 702 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 CYP4F11Q9HBI6 524 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 TMEM8AQ9HCN3 771 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 DDX43Q9NXZ2 648 aaKnown RBP12.74□□□□□ -0.37
LTBP3-219ENST00000530990 NXF1Q9UBU9 619 aaKnown RBP12.74□□□□□ -0.37
LTBP3-219ENST00000530990 PRKAG3Q9UGI9 489 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 INSL5Q9Y5Q6 135 aa12.74□□□□□ -0.37
LTBP3-219ENST00000530990 GABRDO14764 452 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 HNRNPA1P09651 372 aaKnown RBP eCLIP12.73□□□□□ -0.37
LTBP3-219ENST00000530990 ELF1P32519 619 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 MXI1P50539 228 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 NLRP12P59046 1061 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 MYL7Q01449 175 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 CCDC142Q17RM4 750 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 UVSSAQ2YD98 709 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 CCDC40Q4G0X9 1142 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 ZNF667Q5HYK9 610 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 ATAT1Q5SQI0 421 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 SPOPLQ6IQ16 392 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 SCARA5Q6ZMJ2 495 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 DPH6Q7L8W6 267 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 LRRTM3Q86VH5 581 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 TCEAL8Q8IYN2 117 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 MLKLQ8NB16 471 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 SPATA18Q8TC71 538 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 SLC35C1Q96A29 364 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 MRPL45Q9BRJ2 306 aaKnown RBP12.73□□□□□ -0.37
LTBP3-219ENST00000530990 PI4K2AQ9BTU6 479 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 RHOBTB2Q9BYZ6 727 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 SMYD3Q9H7B4 428 aa12.73□□□□□ -0.37
LTBP3-219ENST00000530990 PIDD1Q9HB75 910 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms