RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 GTF2A2P52657 109 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 MAP3K10Q02779 954 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 WASHC5Q12768 1159 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 SPDYAQ5MJ70 313 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 ACAD10Q6JQN1 1059 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 JAMLQ86YT9 394 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 STX19Q8N4C7 294 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 ATP6V0D2Q8N8Y2 350 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 ZNF507Q8TCN5 953 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 AURKCQ9UQB9 309 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 PREX1Q8TCU6 1659 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 PJA2O43164 708 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 RFX5P48382 616 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-227ENST00000530748 PPP3CCP48454 512 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 STK4Q13043 487 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 PTK6Q13882 451 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 AARS2Q5JTZ9 985 aaKnown RBP8.86□□□□□ -0.99
CTNND1-227ENST00000530748 RRM2BQ7LG56 351 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 LINC00523Q86TU6 105 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 LRRC71Q8N4P6 559 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 HPDLQ96IR7 371 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 TMEM39BQ9GZU3 492 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 MRGBPQ9NV56 204 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 DBR1Q9UK59 544 aaKnown RBP8.86□□□□□ -0.99
CTNND1-227ENST00000530748 SLC30A1Q9Y6M5 507 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 NRXN1Q9ULB1 1477 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 RAD51CO43502 376 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 ITGA8P53708 1063 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 Q4G0T1 1027 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 CYP4A22Q5TCH4 519 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 SAMD3Q8N6K7 520 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 RFWD2Q8NHY2 731 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 FAM162AQ96A26 154 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 CINPQ9BW66 212 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-227ENST00000530748 SPATA16Q9BXB7 569 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 TRIM10Q9UDY6 481 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 CDV3Q9UKY7 258 aaKnown RBP8.86□□□□□ -0.99
CTNND1-227ENST00000530748 MTO1Q9Y2Z2 717 aaKnown RBP8.86□□□□□ -0.99
CTNND1-227ENST00000530748 FAM47DPA6NHR8 397 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 ZNF263O14978 683 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 KLHL2O95198 593 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 WEE2P0C1S8 567 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 KRT4P19013 534 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 CYP2B6P20813 491 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 ATICP31939 592 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 OR1G1P47890 313 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 CUL2Q13617 745 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 C17orf80Q9BSJ5 609 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 RUBCNLQ9H714 662 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 RBM12Q9NTZ6 932 aaKnown RBP8.86□□□□□ -0.99
CTNND1-227ENST00000530748 FAM49BQ9NUQ9 324 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 ZBTB12Q9Y330 459 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-227ENST00000530748 PKP3Q9Y446 797 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-227ENST00000530748 SYNDIG1LA6NDD5 238 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 MTSS1O43312 755 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 ATMINO43313 823 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-227ENST00000530748 TBC1D4O60343 1298 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 SLC9A1P19634 815 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 COILP38432 576 aaPredicted RBP8.86□□□□□ -0.99
CTNND1-227ENST00000530748 MAGEA4P43358 317 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 ALDH1A3P47895 512 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 ITPK1Q13572 414 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 ZNF484Q5JVG2 852 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 RFX8Q6ZV50 586 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 EFL1Q7Z2Z2 1120 aaKnown RBP8.86□□□□□ -0.99
CTNND1-227ENST00000530748 USP38Q8NB14 1042 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 SCFD2Q8WU76 684 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 PABPC5Q96DU9 382 aaKnown RBP8.86□□□□□ -0.99
CTNND1-227ENST00000530748 SGSM3Q96HU1 749 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 NUDT12Q9BQG2 462 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 ISCUQ9H1K1 167 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 SENP2Q9HC62 589 aa8.86□□□□□ -0.99
CTNND1-227ENST00000530748 MSH4O15457 936 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 ITGB3P05106 788 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 SERPIND1P05546 499 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 OCM2P0CE71 109 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 OCMP0CE72 109 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 FAM200BP0CF97 657 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 UGT3A1Q6NUS8 523 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 GLB1LQ6UWU2 654 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 CCNI2Q6ZMN8 369 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 CD302Q8IX05 232 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 AGGF1Q8N302 714 aaeCLIP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 MARCH10Q8NA82 808 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 GMCL1P1Q8NEA9 526 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 NR1H4Q96RI1 486 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 OSBPL1AQ9BXW6 950 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 GOLPH3Q9H4A6 298 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 CHMP2BQ9UQN3 213 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 GOLGA8TH3BQL2 631 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 CTDNEP1O95476 244 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 DPEP1P16444 411 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 GEMIN4P57678 1058 aaKnown RBP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 MEI1Q5TIA1 1274 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 E4F1Q66K89 784 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 PRUNE1Q86TP1 453 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 TC2NQ8N9U0 490 aa8.85□□□□□ -0.99
CTNND1-227ENST00000530748 ZNF512Q96ME7 567 aaPredicted RBP8.85□□□□□ -0.99
CTNND1-227ENST00000530748 RUSC1Q9BVN2 902 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms