RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 ZNF276Q8N554 614 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 TSSK1BQ9BXA7 367 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 TRPC7Q9HCX4 862 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 BARHL2Q9NY43 387 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 TMOD2Q9NZR1 351 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 SAP30BPQ9UHR5 308 aaKnown RBP14.87□□□□□ -0.03
PCF11-204ENST00000530660 MAD2L2Q9UI95 211 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 ITGB1BP2Q9UKP3 347 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 RBMX2Q9Y388 322 aaKnown RBP14.87□□□□□ -0.03
PCF11-204ENST00000530660 DLEC1Q9Y238 1755 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 A0A1B0GTW7 788 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 FUOMA2VDF0 154 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 ARHGAP42A6NI28 874 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 CAMTA2O94983 1202 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 STARD3NLO95772 234 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 DLDP09622 509 aaKnown RBP14.87□□□□□ -0.03
PCF11-204ENST00000530660 PLS3P13797 630 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 CASP5P51878 434 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 NCKAP1LP55160 1127 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 IL17RBQ9NRM6 502 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 TMOD3Q9NYL9 352 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 SLC17A7Q9P2U7 560 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 CBFA2T3O75081 653 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 KRT38O76015 456 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 TNFAIP3P21580 790 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 ANXA13P27216 316 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 MAGEA4P43358 317 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 CASP4P49662 377 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 MECOMQ03112 1051 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 CHRNDQ07001 517 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 DRAP1Q14919 205 aaPredicted RBP14.87□□□□□ -0.03
PCF11-204ENST00000530660 SEPT7Q16181 437 aaKnown RBP14.87□□□□□ -0.03
PCF11-204ENST00000530660 CLPPQ16740 277 aaPredicted RBP14.87□□□□□ -0.03
PCF11-204ENST00000530660 ELMSAN1Q6PJG2 1045 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.87□□□□□ -0.03
PCF11-204ENST00000530660 DAGLBQ8NCG7 672 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 RNF169Q8NCN4 708 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 TBCKQ8TEA7 893 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 GFM2Q969S9 779 aaKnown RBP14.87□□□□□ -0.03
PCF11-204ENST00000530660 CCDC124Q96CT7 223 aaKnown RBP14.87□□□□□ -0.03
PCF11-204ENST00000530660 TRAIPQ9BWF2 469 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 LRRC19Q9H756 370 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 MANSC1Q9H8J5 431 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 COQ6Q9Y2Z9 468 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 AK5Q9Y6K8 562 aa14.87□□□□□ -0.03
PCF11-204ENST00000530660 ANKRD62A6NC57 917 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 MATN2O00339 956 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 GGPS1O95749 300 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 PCP11498 1178 aaKnown RBP14.86□□□□□ -0.03
PCF11-204ENST00000530660 SOX5P35711 763 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 TFAP4Q01664 338 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 PDE1CQ14123 709 aaPredicted RBP14.86□□□□□ -0.03
PCF11-204ENST00000530660 FASTKD3Q14CZ7 662 aaKnown RBP14.86□□□□□ -0.03
PCF11-204ENST00000530660 ZNF746Q6NUN9 644 aaPredicted RBP14.86□□□□□ -0.03
PCF11-204ENST00000530660 NEK8Q86SG6 692 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 ICA1LQ8NDH6 482 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 CNBD2Q96M20 576 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 GPAMQ9HCL2 828 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 DCP1AQ9NPI6 582 aaPredicted RBP14.86□□□□□ -0.03
PCF11-204ENST00000530660 UTP6Q9NYH9 597 aaKnown RBP14.86□□□□□ -0.03
PCF11-204ENST00000530660 MTO1Q9Y2Z2 717 aaKnown RBP14.86□□□□□ -0.03
PCF11-204ENST00000530660 CEPT1Q9Y6K0 416 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 AKAP3O75969 853 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 NAPAP54920 295 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 ZNF200P98182 395 aaPredicted RBP14.86□□□□□ -0.03
PCF11-204ENST00000530660 KRT81Q14533 505 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 PSTPIP2Q9H939 334 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 RRN3Q9NYV6 651 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 ATP8B3O60423 1300 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 MYPNQ86TC9 1320 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 SPOPO43791 374 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 FKBP6O75344 327 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 EFTUD2Q15029 972 aaKnown RBP eCLIP14.86□□□□□ -0.03
PCF11-204ENST00000530660 MAP3K21Q5TCX8 1036 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 ANO5Q75V66 913 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 TCP10LQ8TDR4 215 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 TMIGD2Q96BF3 282 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 NEURL2Q9BR09 285 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 ZBTB1Q9Y2K1 713 aa14.86□□□□□ -0.03
PCF11-204ENST00000530660 COL1A1P02452 1464 aaPredicted RBP14.85□□□□□ -0.03
PCF11-204ENST00000530660 CASZ1Q86V15 1759 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 SLC37A4O43826 429 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 LRRN2O75325 713 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 FTLP02792 175 aaPredicted RBP14.85□□□□□ -0.03
PCF11-204ENST00000530660 C6orf222P0C671 652 aaPredicted RBP14.85□□□□□ -0.03
PCF11-204ENST00000530660 SERPINB6P35237 376 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 EPHB1P54762 984 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 MYBPC1Q00872 1141 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 ARHGAP44Q17R89 818 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 SLC20A1Q8WUM9 679 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 EIF2AQ9BY44 585 aaKnown RBP14.85□□□□□ -0.03
PCF11-204ENST00000530660 SAYSD1Q9NPB0 183 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 TRPV5Q9NQA5 729 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 TUBA8Q9NY65 449 aaPredicted RBP14.85□□□□□ -0.03
PCF11-204ENST00000530660 PPARGC1AQ9UBK2 798 aaKnown RBP14.85□□□□□ -0.03
PCF11-204ENST00000530660 PCDHA2Q9Y5H9 948 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 USP17L3A6NCW0 530 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 USP17L4A6NCW7 530 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 E5RJQ4 531 aa14.85□□□□□ -0.03
PCF11-204ENST00000530660 TRPA1O75762 1119 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms