RNA–Protein interactions for RNA: ENST00000530322.5

SF3B2-209, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-209ENST00000530322 AKAP3O75969 853 aa18.12■□□□□ 0.49
SF3B2-209ENST00000530322 LRG1P02750 347 aa18.12■□□□□ 0.49
SF3B2-209ENST00000530322 ALADP13716 330 aa18.12■□□□□ 0.49
SF3B2-209ENST00000530322 RPL13P26373 211 aaKnown RBP18.12■□□□□ 0.49
SF3B2-209ENST00000530322 DLG4P78352 724 aa18.12■□□□□ 0.49
SF3B2-209ENST00000530322 NTHL1P78549 312 aa18.12■□□□□ 0.49
SF3B2-209ENST00000530322 EDRF1Q3B7T1 1238 aa18.12■□□□□ 0.49
SF3B2-209ENST00000530322 CENPPQ6IPU0 288 aa18.12■□□□□ 0.49
SF3B2-209ENST00000530322 LIMS2Q7Z4I7 341 aa18.12■□□□□ 0.49
SF3B2-209ENST00000530322 TMEM86AQ8N2M4 240 aa18.12■□□□□ 0.49
SF3B2-209ENST00000530322 TOP6BLQ8N6T0 577 aa18.12■□□□□ 0.49
SF3B2-209ENST00000530322 ACSF2Q96CM8 615 aaPredicted RBP18.12■□□□□ 0.49
SF3B2-209ENST00000530322 PGLYRP2Q96PD5 576 aa18.12■□□□□ 0.49
SF3B2-209ENST00000530322 ZCWPW1Q9H0M4 648 aa18.12■□□□□ 0.49
SF3B2-209ENST00000530322 CRISPLD1Q9H336 500 aa18.12■□□□□ 0.49
SF3B2-209ENST00000530322 HCFC1R1Q9NWW0 138 aa18.12■□□□□ 0.49
SF3B2-209ENST00000530322 DNMT3BQ9UBC3 853 aaKnown RBP18.12■□□□□ 0.49
SF3B2-209ENST00000530322 MAN1B1Q9UKM7 699 aa18.12■□□□□ 0.49
SF3B2-209ENST00000530322 MTMR11A4FU01 709 aa18.11■□□□□ 0.49
SF3B2-209ENST00000530322 AP3M2P53677 418 aa18.11■□□□□ 0.49
SF3B2-209ENST00000530322 ADAM9Q13443 819 aa18.11■□□□□ 0.49
SF3B2-209ENST00000530322 SOWAHAQ2M3V2 549 aa18.11■□□□□ 0.49
SF3B2-209ENST00000530322 SLC39A12Q504Y0 691 aa18.11■□□□□ 0.49
SF3B2-209ENST00000530322 C1orf220Q5T0J3 134 aa18.11■□□□□ 0.49
SF3B2-209ENST00000530322 TDRD10Q5VZ19 366 aaKnown RBP18.11■□□□□ 0.49
SF3B2-209ENST00000530322 DPH6Q7L8W6 267 aa18.11■□□□□ 0.49
SF3B2-209ENST00000530322 LRRTM3Q86VH5 581 aa18.11■□□□□ 0.49
SF3B2-209ENST00000530322 ADSSL1Q8N142 457 aa18.11■□□□□ 0.49
SF3B2-209ENST00000530322 SPATA18Q8TC71 538 aa18.11■□□□□ 0.49
SF3B2-209ENST00000530322 MYADMQ96S97 322 aa18.11■□□□□ 0.49
SF3B2-209ENST00000530322 GABRDO14764 452 aa18.1■□□□□ 0.49
SF3B2-209ENST00000530322 IKBKBO14920 756 aa18.1■□□□□ 0.49
SF3B2-209ENST00000530322 STAU1O95793 577 aaKnown RBP18.1■□□□□ 0.49
SF3B2-209ENST00000530322 C4BPAP04003 597 aaKnown RBP18.1■□□□□ 0.49
SF3B2-209ENST00000530322 FSHRP23945 695 aa18.1■□□□□ 0.49
SF3B2-209ENST00000530322 VAMP7P51809 220 aa18.1■□□□□ 0.49
SF3B2-209ENST00000530322 MYL6P60660 151 aa18.1■□□□□ 0.49
SF3B2-209ENST00000530322 DUSP4Q13115 394 aa18.1■□□□□ 0.49
SF3B2-209ENST00000530322 ISM2Q6H9L7 571 aa18.1■□□□□ 0.49
SF3B2-209ENST00000530322 ADGRF2Q8IZF7 708 aa18.1■□□□□ 0.49
SF3B2-209ENST00000530322 TTC9BQ8N6N2 239 aa18.1■□□□□ 0.49
SF3B2-209ENST00000530322 ATAD1Q8NBU5 361 aa18.1■□□□□ 0.49
SF3B2-209ENST00000530322 IPO9Q96P70 1041 aaKnown RBP18.1■□□□□ 0.49
SF3B2-209ENST00000530322 XYLT2Q9H1B5 865 aa18.1■□□□□ 0.49
SF3B2-209ENST00000530322 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.1■□□□□ 0.49
SF3B2-209ENST00000530322 LIMD1Q9UGP4 676 aa18.1■□□□□ 0.49
SF3B2-209ENST00000530322 YIPF1Q9Y548 306 aa18.1■□□□□ 0.49
SF3B2-209ENST00000530322 PHACTR2O75167 634 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 RHOP08100 348 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 PTPN2P17706 415 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 BMP6P22004 513 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 GBP2P32456 591 aaPredicted RBP18.09■□□□□ 0.49
SF3B2-209ENST00000530322 PSMC2P35998 433 aaKnown RBP18.09■□□□□ 0.49
SF3B2-209ENST00000530322 PMS1P54277 932 aaKnown RBP18.09■□□□□ 0.49
SF3B2-209ENST00000530322 MCCD1P59942 119 aaPredicted RBP18.09■□□□□ 0.49
SF3B2-209ENST00000530322 TWF1Q12792 350 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 SMARCB1Q12824 385 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 BIRC3Q13489 604 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 TRPC3Q13507 836 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 MORC3Q14149 939 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 PTPN21Q16825 1174 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 ZACNQ401N2 412 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 PABPC1LQ4VXU2 614 aaKnown RBP18.09■□□□□ 0.49
SF3B2-209ENST00000530322 INTS8Q75QN2 995 aaKnown RBP18.09■□□□□ 0.49
SF3B2-209ENST00000530322 GET4Q7L5D6 327 aaPredicted RBP18.09■□□□□ 0.49
SF3B2-209ENST00000530322 OSTM1Q86WC4 334 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 FAM186BQ8IYM0 893 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 KBTBD7Q8WVZ9 684 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 ACBD6Q9BR61 282 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 MKNK1Q9BUB5 465 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 AVENQ9NQS1 362 aaPredicted RBP18.09■□□□□ 0.49
SF3B2-209ENST00000530322 DDX43Q9NXZ2 648 aaKnown RBP18.09■□□□□ 0.49
SF3B2-209ENST00000530322 CEP72Q9P209 647 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 EPS15L1Q9UBC2 864 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 HSFX1Q9UBD0 423 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 SLC27A5Q9Y2P5 690 aa18.09■□□□□ 0.49
SF3B2-209ENST00000530322 VNN1O95497 513 aa18.08■□□□□ 0.48
SF3B2-209ENST00000530322 CD44P16070 742 aaKnown RBP18.08■□□□□ 0.48
SF3B2-209ENST00000530322 ATICP31939 592 aa18.08■□□□□ 0.48
SF3B2-209ENST00000530322 LHX1P48742 406 aa18.08■□□□□ 0.48
SF3B2-209ENST00000530322 ENPEPQ07075 957 aa18.08■□□□□ 0.48
SF3B2-209ENST00000530322 NCOA4Q13772 614 aa18.08■□□□□ 0.48
SF3B2-209ENST00000530322 WDR72Q3MJ13 1102 aa18.08■□□□□ 0.48
SF3B2-209ENST00000530322 ANKRD40Q6AI12 368 aa18.08■□□□□ 0.48
SF3B2-209ENST00000530322 SV2AQ7L0J3 742 aa18.08■□□□□ 0.48
SF3B2-209ENST00000530322 ZC3H3Q8IXZ2 948 aaKnown RBP18.08■□□□□ 0.48
SF3B2-209ENST00000530322 DCP1BQ8IZD4 617 aaKnown RBP18.08■□□□□ 0.48
SF3B2-209ENST00000530322 ITFG1Q8TB96 612 aa18.08■□□□□ 0.48
SF3B2-209ENST00000530322 C2orf15Q8WU43 125 aaKnown RBP18.08■□□□□ 0.48
SF3B2-209ENST00000530322 SYAP1Q96A49 352 aaPredicted RBP18.08■□□□□ 0.48
SF3B2-209ENST00000530322 EEF2KMTQ96G04 330 aa18.08■□□□□ 0.48
SF3B2-209ENST00000530322 MMS19Q96T76 1030 aa18.08■□□□□ 0.48
SF3B2-209ENST00000530322 C1QTNF1Q9BXJ1 281 aa18.08■□□□□ 0.48
SF3B2-209ENST00000530322 VRTNQ9H8Y1 702 aa18.08■□□□□ 0.48
SF3B2-209ENST00000530322 C11orf16Q9NQ32 467 aa18.08■□□□□ 0.48
SF3B2-209ENST00000530322 TMLHEQ9NVH6 421 aa18.08■□□□□ 0.48
SF3B2-209ENST00000530322 PSMA7O14818 248 aa18.07■□□□□ 0.48
SF3B2-209ENST00000530322 CETN3O15182 167 aa18.07■□□□□ 0.48
SF3B2-209ENST00000530322 HCRTO43612 131 aa18.07■□□□□ 0.48
SF3B2-209ENST00000530322 ASGR2P07307 311 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms