RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 CYP3A5P20815 502 aa15.38■□□□□ 0.05
TTC39A-216ENST00000530004 TMEM270Q6UE05 265 aa15.38■□□□□ 0.05
TTC39A-216ENST00000530004 H2AFVQ71UI9 128 aa15.38■□□□□ 0.05
TTC39A-216ENST00000530004 ZNF280BQ86YH2 543 aa15.38■□□□□ 0.05
TTC39A-216ENST00000530004 CMTR2Q8IYT2 770 aaKnown RBP15.38■□□□□ 0.05
TTC39A-216ENST00000530004 LRRC43Q8N309 656 aa15.38■□□□□ 0.05
TTC39A-216ENST00000530004 BEST2Q8NFU1 509 aa15.38■□□□□ 0.05
TTC39A-216ENST00000530004 CXorf38Q8TB03 319 aa15.38■□□□□ 0.05
TTC39A-216ENST00000530004 NXF1Q9UBU9 619 aaKnown RBP15.38■□□□□ 0.05
TTC39A-216ENST00000530004 SALL4Q9UJQ4 1053 aa15.38■□□□□ 0.05
TTC39A-216ENST00000530004 INSL6Q9Y581 213 aa15.38■□□□□ 0.05
TTC39A-216ENST00000530004 RIOK3O14730 519 aaKnown RBP15.37■□□□□ 0.05
TTC39A-216ENST00000530004 URI1O94763 535 aaPredicted RBP15.37■□□□□ 0.05
TTC39A-216ENST00000530004 DDHD2O94830 711 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 MOCS3O95396 460 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 ATICP31939 592 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 ASPAP45381 313 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 BPIFB4P59827 614 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 FMO1Q01740 532 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 CDR2Q01850 454 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 RNASELQ05823 741 aaKnown RBP15.37■□□□□ 0.05
TTC39A-216ENST00000530004 DSC1Q08554 894 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 TUSC3Q13454 348 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 BTG3Q14201 252 aaPredicted RBP15.37■□□□□ 0.05
TTC39A-216ENST00000530004 FAM109BQ6ICB4 259 aaPredicted RBP15.37■□□□□ 0.05
TTC39A-216ENST00000530004 SCARA5Q6ZMJ2 495 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 TDHQ8IZJ6 230 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 UBR7Q8N806 425 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 RBBP8NLQ8NC74 664 aaPredicted RBP15.37■□□□□ 0.05
TTC39A-216ENST00000530004 DDX1Q92499 740 aaKnown RBP15.37■□□□□ 0.05
TTC39A-216ENST00000530004 RAD9AQ99638 391 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 PRO3102Q9H379 93 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 GOLGA2P5Q9HBQ8 144 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 TAS2R14Q9NYV8 317 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 POLIQ9UNA4 740 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 AGAP1Q9UPQ3 857 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.37■□□□□ 0.05
TTC39A-216ENST00000530004 RALGAPA2Q2PPJ7 1873 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 PDE4DIPQ5VU43 2346 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 COL4A6Q14031 1691 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 CITO14578 2027 aa15.37■□□□□ 0.05
TTC39A-216ENST00000530004 CTAGE9A4FU28 777 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 TLL1O43897 1013 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 B4GALT3O60512 393 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 CALCAP01258 141 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 CD58P19256 250 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 NAP1L1P55209 391 aaKnown RBP15.36■□□□□ 0.05
TTC39A-216ENST00000530004 RBP5P82980 135 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 ZNF667Q5HYK9 610 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 CHRDL2Q6WN34 429 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 PCDHB18PQ96TA0 734 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 NAPGQ99747 312 aaPredicted RBP15.36■□□□□ 0.05
TTC39A-216ENST00000530004 NRDE2Q9H7Z3 1164 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 CISHQ9NSE2 258 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 HCSTQ9UBK5 93 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 INTUQ9ULD6 942 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 CNTN6Q9UQ52 1028 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 CAPN6Q9Y6Q1 641 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 PTPRSQ13332 1948 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 FAM170AA1A519 330 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 BTNL10A8MVZ5 291 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 GRXCR1A8MXD5 290 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 BUB1O43683 1085 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 TACC1O75410 805 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 WEE2P0C1S8 567 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 LRPAP1P30533 357 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 GALCP54803 685 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 WDR72Q3MJ13 1102 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 COLGALT2Q8IYK4 626 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 RNF10Q8N5U6 811 aaKnown RBP15.36■□□□□ 0.05
TTC39A-216ENST00000530004 TRIM58Q8NG06 486 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 HPDLQ96IR7 371 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 NOX5Q96PH1 765 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 FAM193BQ96PV7 902 aaPredicted RBP15.36■□□□□ 0.05
TTC39A-216ENST00000530004 VRTNQ9H8Y1 702 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 DNAJB4Q9UDY4 337 aa15.36■□□□□ 0.05
TTC39A-216ENST00000530004 CASTOR2A6NHX0 329 aa15.35■□□□□ 0.05
TTC39A-216ENST00000530004 GNA15P30679 374 aa15.35■□□□□ 0.05
TTC39A-216ENST00000530004 ZNF132P52740 706 aa15.35■□□□□ 0.05
TTC39A-216ENST00000530004 RABGGTBP53611 331 aa15.35■□□□□ 0.05
TTC39A-216ENST00000530004 YWHAEP62258 255 aaKnown RBP15.35■□□□□ 0.05
TTC39A-216ENST00000530004 ZNF677Q86XU0 584 aa15.35■□□□□ 0.05
TTC39A-216ENST00000530004 SP7Q8TDD2 431 aaPredicted RBP15.35■□□□□ 0.05
TTC39A-216ENST00000530004 FAXDC2Q96IV6 333 aa15.35■□□□□ 0.05
TTC39A-216ENST00000530004 ALS2CR12Q96Q35 445 aa15.35■□□□□ 0.05
TTC39A-216ENST00000530004 PAAF1Q9BRP4 392 aa15.35■□□□□ 0.05
TTC39A-216ENST00000530004 CWH43Q9H720 699 aa15.35■□□□□ 0.05
TTC39A-216ENST00000530004 CACNG4Q9UBN1 327 aa15.35■□□□□ 0.05
TTC39A-216ENST00000530004 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.34■□□□□ 0.05
TTC39A-216ENST00000530004 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.34■□□□□ 0.05
TTC39A-216ENST00000530004 ANO9A1A5B4 782 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 RTN2O75298 545 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 FTLP02792 175 aaPredicted RBP15.34■□□□□ 0.05
TTC39A-216ENST00000530004 TMEM253P0C7T8 217 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 P4HA1P13674 534 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 ABCB4P21439 1286 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 RPL9P32969 192 aaKnown RBP15.34■□□□□ 0.05
TTC39A-216ENST00000530004 RAP1GAPP47736 663 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 CLCNKBP51801 687 aa15.34■□□□□ 0.05
TTC39A-216ENST00000530004 UPP1Q16831 310 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms