RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 ARMCX5Q6P1M9 558 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 DSTYKQ6XUX3 929 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 DIS3L2Q8IYB7 885 aaKnown RBP11.35□□□□□ -0.59
COPB1-207ENST00000529866 GATA6Q92908 595 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 TARS2Q9BW92 718 aaKnown RBP11.35□□□□□ -0.59
COPB1-207ENST00000529866 SCNM1Q9BWG6 230 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 TMEM121BQ9BXQ6 578 aaPredicted RBP11.35□□□□□ -0.59
COPB1-207ENST00000529866 DUSP15Q9H1R2 295 aaPredicted RBP11.35□□□□□ -0.59
COPB1-207ENST00000529866 TMEM60Q9H2L4 133 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 BHMT2Q9H2M3 363 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 CRISPLD1Q9H336 500 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 ANKFY1Q9P2R3 1169 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 HSFX1Q9UBD0 423 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 TUBGCP4Q9UGJ1 667 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 LHX6Q9UPM6 363 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 WASF3Q9UPY6 502 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 RBM19Q9Y4C8 960 aaKnown RBP11.35□□□□□ -0.59
COPB1-207ENST00000529866 GREB1Q4ZG55 1949 aa11.35□□□□□ -0.59
COPB1-207ENST00000529866 SPAG17Q6Q759 2223 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 BTBD18B2RXH4 712 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 XPOTO43592 962 aaKnown RBP11.34□□□□□ -0.59
COPB1-207ENST00000529866 VNN2O95498 520 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 OR52Z1P0C646 297 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 TYMPP19971 482 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 PROZP22891 400 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 NPTX2P47972 431 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 TUFMP49411 452 aaKnown RBP11.34□□□□□ -0.59
COPB1-207ENST00000529866 PEX3P56589 373 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 CYP4F8P98187 520 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 BFSP1Q12934 665 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 STRN3Q13033 797 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 RUNX3Q13761 415 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 OVOS1Q6IE37 1185 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 CC2D1AQ6P1N0 951 aaPredicted RBP11.34□□□□□ -0.59
COPB1-207ENST00000529866 SYT13Q7L8C5 426 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 ATAD1Q8NBU5 361 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 NSUN7Q8NE18 718 aaKnown RBP11.34□□□□□ -0.59
COPB1-207ENST00000529866 CCDC26Q8TAB7 109 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 GTF3C6Q969F1 213 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 DRC1Q96MC2 740 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 SEPT5Q99719 369 aaPredicted RBP11.34□□□□□ -0.59
COPB1-207ENST00000529866 KIF9Q9HAQ2 790 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 PLEKHA5Q9HAU0 1116 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 KMT5AQ9NQR1 393 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 GKN1Q9NS71 199 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 ARHGAP28Q9P2N2 729 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 EBF1Q9UH73 591 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 SLC27A5Q9Y2P5 690 aa11.34□□□□□ -0.59
COPB1-207ENST00000529866 TIMM13Q9Y5L4 95 aaPredicted RBP11.34□□□□□ -0.59
COPB1-207ENST00000529866 DSPP15924 2871 aaKnown RBP11.33□□□□□ -0.6
COPB1-207ENST00000529866 TOM1L1O75674 476 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 EGFP01133 1207 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 ODC1P11926 461 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 CYP3A5P20815 502 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 LRPAP1P30533 357 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 CCT6AP40227 531 aaKnown RBP11.33□□□□□ -0.6
COPB1-207ENST00000529866 AARSP49588 968 aaKnown RBP eCLIP11.33□□□□□ -0.64e-7■□□□□ 11.3
COPB1-207ENST00000529866 ANAPC15P60006 121 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 RING1Q06587 406 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 ORC2Q13416 577 aaPredicted RBP11.33□□□□□ -0.6
COPB1-207ENST00000529866 MGAT5BQ3V5L5 792 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 USP39Q53GS9 565 aaKnown RBP11.33□□□□□ -0.6
COPB1-207ENST00000529866 LRSAM1Q6UWE0 723 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 CYP2U1Q7Z449 544 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 CMTM8Q8IZV2 173 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 RPLP0P6Q8NHW5 317 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 KIF12Q96FN5 646 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 P2RY13Q9BPV8 354 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 FAM83CQ9BQN1 747 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 EBF3Q9H4W6 596 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 SLC32A1Q9H598 525 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 C17orf75Q9HAS0 396 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 POLD4Q9HCU8 107 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 HPS4Q9NQG7 708 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 UBQLN1Q9UMX0 589 aaKnown RBP11.33□□□□□ -0.6
COPB1-207ENST00000529866 NEUROG3Q9Y4Z2 214 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 STK24Q9Y6E0 443 aa11.33□□□□□ -0.6
COPB1-207ENST00000529866 FLNBO75369 2602 aaKnown RBP11.33□□□□□ -0.6
COPB1-207ENST00000529866 ABLIM1O14639 778 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 DCLK1O15075 740 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 HIP1RO75146 1068 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 SOAT2O75908 522 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 CXCL8P10145 99 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 PAX3P23760 479 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 DDX6P26196 483 aaKnown RBP eCLIP11.32□□□□□ -0.63e-6■■■□□ 19.2
COPB1-207ENST00000529866 DGKEP52429 567 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 PPP2R3AQ06190 1150 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 LMAN2Q12907 356 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 DMC1Q14565 340 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 PDGFRLQ15198 375 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 ANKRD1Q15327 319 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 SAFBQ15424 915 aaKnown RBP eCLIP11.32□□□□□ -0.6
COPB1-207ENST00000529866 SLC10A6Q3KNW5 377 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 UAP1L1Q3KQV9 507 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 PMS2CLQ68D20 193 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 KIAA1211LQ6NV74 962 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 CPA6Q8N4T0 437 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 TSTD1Q8NFU3 115 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 LPIN3Q9BQK8 851 aa11.32□□□□□ -0.6
COPB1-207ENST00000529866 SMG9Q9H0W8 520 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms