RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 CENPUQ71F23 418 aa13.14□□□□□ -0.31
TSKU-203ENST00000527881 ZCCHC9Q8N567 271 aaKnown RBP13.14□□□□□ -0.31
TSKU-203ENST00000527881 CD101Q93033 1021 aa13.14□□□□□ -0.31
TSKU-203ENST00000527881 HERPUD2Q9BSE4 406 aa13.14□□□□□ -0.31
TSKU-203ENST00000527881 RABGAP1Q9Y3P9 1069 aa13.14□□□□□ -0.31
TSKU-203ENST00000527881 ARHGAP10A1A4S6 786 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 TGFB1I1O43294 461 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 TYROBPO43914 113 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 MAGEC1O60732 1142 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 HADHBP55084 474 aaKnown RBP13.13□□□□□ -0.31
TSKU-203ENST00000527881 ZNF200P98182 395 aaPredicted RBP13.13□□□□□ -0.31
TSKU-203ENST00000527881 KCTD21Q4G0X4 260 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 SLC47A2Q86VL8 602 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 PDSS2Q86YH6 399 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 PYROXD1Q8WU10 500 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 USP6NLQ92738 828 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 SKA1Q96BD8 255 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 SYT11Q9BT88 431 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 ZNF804BA4D1E1 1349 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 CAMTA2O94983 1202 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 ABHD2P08910 425 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 CDK4P11802 303 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 KRT5P13647 590 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 GCAP28676 217 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 SSTR1P30872 391 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 RAP1GDS1P52306 607 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 GEMIN4P57678 1058 aaKnown RBP13.13□□□□□ -0.31
TSKU-203ENST00000527881 KRT72Q14CN4 511 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 NADK2Q4G0N4 442 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 MAP3K21Q5TCX8 1036 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 NOP9Q86U38 636 aaKnown RBP13.13□□□□□ -0.31
TSKU-203ENST00000527881 FAM178BQ8IXR5 827 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 CNBD2Q96M20 576 aa13.13□□□□□ -0.31
TSKU-203ENST00000527881 CHMP2AO43633 222 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 ATP9BO43861 1147 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 GYS1P13807 737 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 ETS1P14921 441 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 PMLP29590 882 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 CDK8P49336 464 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 TMPRSS15P98073 1019 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 FOLH1Q04609 750 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 PDE1CQ14123 709 aaPredicted RBP13.12□□□□□ -0.31
TSKU-203ENST00000527881 ZYXQ15942 572 aaKnown RBP13.12□□□□□ -0.31
TSKU-203ENST00000527881 KBTBD12Q3ZCT8 623 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 EFHC1Q5JVL4 640 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 NCCRP1Q6ZVX7 275 aaPredicted RBP13.12□□□□□ -0.31
TSKU-203ENST00000527881 TREML1Q86YW5 311 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 CLEC10AQ8IUN9 316 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 PALM2Q8IXS6 379 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 SLCO2A1Q92959 643 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 ACAP3Q96P50 834 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 UBAP1LF5GYI3 381 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 PI4K2BG5E9Z4 385 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 STRNO43815 780 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 EDIL3O43854 480 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 PHBP35232 272 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 CCR3P51677 355 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 SLC25A3Q00325 362 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 TFDP1Q14186 410 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 ANKRD20A4Q4UJ75 823 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 TBC1D9BQ66K14 1250 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 ZNF34Q8IZ26 560 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 GSDMBQ8TAX9 411 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 TMEM117Q9H0C3 514 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 TSPYL2Q9H2G4 693 aaPredicted RBP13.12□□□□□ -0.31
TSKU-203ENST00000527881 S100A14Q9HCY8 104 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 GINM1Q9NU53 330 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 TAGLN3Q9UI15 199 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 LZTS1Q9Y250 596 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 COL1A1P02452 1464 aaPredicted RBP13.12□□□□□ -0.31
TSKU-203ENST00000527881 TRIM43BA6NCK2 446 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 LDHBP07195 334 aaKnown RBP13.12□□□□□ -0.31
TSKU-203ENST00000527881 ZNF76P36508 570 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 EPC2Q52LR7 807 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 MFSD4BQ5TF39 518 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 CLEC4GQ6UXB4 293 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 TPH2Q8IWU9 490 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 POU5F2Q8N7G0 328 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 FAM172AQ8WUF8 416 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 PSPC1Q8WXF1 523 aaKnown RBP13.12□□□□□ -0.31
TSKU-203ENST00000527881 PRPF18Q99633 342 aaKnown RBP13.12□□□□□ -0.31
TSKU-203ENST00000527881 FHDC1Q9C0D6 1143 aaPredicted RBP13.12□□□□□ -0.31
TSKU-203ENST00000527881 Q9H521 79 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 EURLQ9NYK6 297 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 UVRAGQ9P2Y5 699 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 GTF3C4Q9UKN8 822 aa13.12□□□□□ -0.31
TSKU-203ENST00000527881 BARX2Q9UMQ3 279 aaPredicted RBP13.12□□□□□ -0.31
TSKU-203ENST00000527881 CAPN8A6NHC0 703 aa13.11□□□□□ -0.31
TSKU-203ENST00000527881 KRT81Q14533 505 aa13.11□□□□□ -0.31
TSKU-203ENST00000527881 CNGA3Q16281 694 aa13.11□□□□□ -0.31
TSKU-203ENST00000527881 MAP7D1Q3KQU3 841 aa13.11□□□□□ -0.31
TSKU-203ENST00000527881 EFCAB3Q8N7B9 438 aa13.11□□□□□ -0.31
TSKU-203ENST00000527881 PPP1R14CQ8TAE6 165 aa13.11□□□□□ -0.31
TSKU-203ENST00000527881 ELMO3Q96BJ8 720 aa13.11□□□□□ -0.31
TSKU-203ENST00000527881 PAFAH2Q99487 392 aa13.11□□□□□ -0.31
TSKU-203ENST00000527881 VPS11Q9H270 941 aa13.11□□□□□ -0.31
TSKU-203ENST00000527881 USP29Q9HBJ7 922 aa13.11□□□□□ -0.31
TSKU-203ENST00000527881 PCDH18Q9HCL0 1135 aa13.11□□□□□ -0.31
TSKU-203ENST00000527881 SGK1O00141 431 aa13.11□□□□□ -0.31
TSKU-203ENST00000527881 TPD52L2O43399 206 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms