RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 RHOBTB1O94844 696 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 PRAMEF12O95522 483 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 CAVIN2O95810 425 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 CLTAP09496 248 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 PAX3P23760 479 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 TUFMP49411 452 aaKnown RBP13.38□□□□□ -0.27
SRPRA-202ENST00000527817 FXR2P51116 673 aaKnown RBP eCLIP13.38□□□□□ -0.276e-14■■■□□ 14.6
SRPRA-202ENST00000527817 NOVA1P51513 510 aaKnown RBP13.38□□□□□ -0.27
SRPRA-202ENST00000527817 AMPD2Q01433 879 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 RUNX3Q13761 415 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 ME3Q16798 604 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 OVOS1Q6IE37 1185 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 ARMCX5Q6P1M9 558 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 DSTYKQ6XUX3 929 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 C4orf32Q8N8J7 132 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 NECAB1Q8N987 351 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 GTF3C6Q969F1 213 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 DRC1Q96MC2 740 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 SLC46A2Q9BY10 475 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 DDX19AQ9NUU7 478 aaKnown RBP13.38□□□□□ -0.27
SRPRA-202ENST00000527817 LRWD1Q9UFC0 647 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 EBF1Q9UH73 591 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 DNM3Q9UQ16 869 aa13.38□□□□□ -0.27
SRPRA-202ENST00000527817 NUP210Q8TEM1 1887 aaPredicted RBP13.38□□□□□ -0.27
SRPRA-202ENST00000527817 KIF26AQ9ULI4 1882 aaPredicted RBP13.38□□□□□ -0.27
SRPRA-202ENST00000527817 ABCA7Q8IZY2 2146 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 BCLAF3A2AJT9 711 aaKnown RBP13.37□□□□□ -0.27
SRPRA-202ENST00000527817 TMEM8BA6NDV4 472 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 C4orf47A7E2U8 309 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 SLC16A4O15374 487 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 CLDN3O15551 220 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 HARSP12081 509 aaKnown RBP13.37□□□□□ -0.27
SRPRA-202ENST00000527817 DRD1P21728 446 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 CDC25CP30307 473 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 MCL1Q07820 350 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 STRN3Q13033 797 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 MAPK7Q13164 816 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 NOLC1Q14978 699 aaKnown RBP eCLIP13.37□□□□□ -0.27
SRPRA-202ENST00000527817 SAFBQ15424 915 aaKnown RBP eCLIP13.37□□□□□ -0.27
SRPRA-202ENST00000527817 ELF2Q15723 593 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 SEZ6Q53EL9 994 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 DAB2IPQ5VWQ8 1189 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 RINT1Q6NUQ1 792 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 ZPBP2Q6X784 338 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 C1orf186Q6ZWK4 172 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 CMTM8Q8IZV2 173 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 SPIRE2Q8WWL2 714 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 CHFRQ96EP1 664 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 TSPAN18Q96SJ8 248 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 EDEM2Q9BV94 578 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 TMEM121BQ9BXQ6 578 aaPredicted RBP13.37□□□□□ -0.27
SRPRA-202ENST00000527817 IL21Q9HBE4 155 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 HPS4Q9NQG7 708 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 UBQLN1Q9UMX0 589 aaKnown RBP13.37□□□□□ -0.27
SRPRA-202ENST00000527817 EML5Q05BV3 1969 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 DMXL2Q8TDJ6 3036 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 PCNX2A6NKB5 2137 aa13.37□□□□□ -0.27
SRPRA-202ENST00000527817 DSPP15924 2871 aaKnown RBP13.37□□□□□ -0.27
SRPRA-202ENST00000527817 OTOL1A6NHN0 477 aaPredicted RBP13.36□□□□□ -0.27
SRPRA-202ENST00000527817 SOBPA7XYQ1 873 aa13.36□□□□□ -0.27
SRPRA-202ENST00000527817 GIPC1O14908 333 aa13.36□□□□□ -0.27
SRPRA-202ENST00000527817 XPOTO43592 962 aaKnown RBP13.36□□□□□ -0.27
SRPRA-202ENST00000527817 RNF40O75150 1001 aa13.36□□□□□ -0.27
SRPRA-202ENST00000527817 SOAT2O75908 522 aa13.36□□□□□ -0.27
SRPRA-202ENST00000527817 LARGE1O95461 756 aa13.36□□□□□ -0.27
SRPRA-202ENST00000527817 ADRB2P07550 413 aa13.36□□□□□ -0.27
SRPRA-202ENST00000527817 CEACAM1P13688 526 aa13.36□□□□□ -0.27
SRPRA-202ENST00000527817 GALK1P51570 392 aa13.36□□□□□ -0.27
SRPRA-202ENST00000527817 LILRA4P59901 499 aa13.36□□□□□ -0.27
SRPRA-202ENST00000527817 CYP4F8P98187 520 aa13.36□□□□□ -0.27
SRPRA-202ENST00000527817 KARSQ15046 597 aaKnown RBP13.36□□□□□ -0.27
SRPRA-202ENST00000527817 FBXO43Q4G163 708 aa13.36□□□□□ -0.27
SRPRA-202ENST00000527817 TCEAL6Q6IPX3 200 aa13.36□□□□□ -0.27
SRPRA-202ENST00000527817 TMEM130Q8N3G9 435 aa13.36□□□□□ -0.27
SRPRA-202ENST00000527817 TTC9BQ8N6N2 239 aa13.36□□□□□ -0.27
SRPRA-202ENST00000527817 TCEAL3Q969E4 200 aa13.36□□□□□ -0.27
SRPRA-202ENST00000527817 EXOC4Q96A65 974 aa13.36□□□□□ -0.27
SRPRA-202ENST00000527817 KIF12Q96FN5 646 aa13.36□□□□□ -0.27
SRPRA-202ENST00000527817 TIPINQ9BVW5 301 aa13.36□□□□□ -0.27
SRPRA-202ENST00000527817 FBRSL1Q9HCM7 1045 aaKnown RBP13.36□□□□□ -0.27
SRPRA-202ENST00000527817 PKD1L2Q7Z442 2459 aa13.36□□□□□ -0.27
SRPRA-202ENST00000527817 AKAP13Q12802 2813 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 SFI1A8K8P3 1242 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 LACTBL1A8MY62 500 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 E9PMD0 336 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 JAK2O60674 1132 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 EGFP01133 1207 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 CXCL8P10145 99 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 HOXB3P14651 431 aaPredicted RBP13.35□□□□□ -0.27
SRPRA-202ENST00000527817 CSRP1P21291 193 aaKnown RBP13.35□□□□□ -0.27
SRPRA-202ENST00000527817 DDX6P26196 483 aaKnown RBP eCLIP13.35□□□□□ -0.27
SRPRA-202ENST00000527817 FOSBP53539 338 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 SMTNP53814 917 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 ANAPC15P60006 121 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 CREB5Q02930 508 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 SPAG1Q07617 926 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 ZNF252P-AS1Q0IIN9 211 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 VEPH1Q14D04 833 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 SH3PXD2AQ5TCZ1 1133 aa13.35□□□□□ -0.27
SRPRA-202ENST00000527817 SYT13Q7L8C5 426 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms