RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 REM2Q8IYK8 340 aaPredicted RBP15.86■□□□□ 0.13
USP47-207ENST00000527733 LRRC8CQ8TDW0 803 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 PPP2R3CQ969Q6 453 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.86■□□□□ 0.13
USP47-207ENST00000527733 DSEQ9UL01 958 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 UNCXA6NJT0 531 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 PQBP1O60828 265 aaKnown RBP15.86■□□□□ 0.13
USP47-207ENST00000527733 FKTNO75072 461 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 LSM8O95777 96 aaKnown RBP15.86■□□□□ 0.13
USP47-207ENST00000527733 NFKBIAP25963 317 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 LHX1P48742 406 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 JAG1P78504 1218 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 KRT17Q04695 432 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 SF3A3Q12874 501 aaKnown RBP eCLIP15.86■□□□□ 0.135e-6■■□□□ 14.3
USP47-207ENST00000527733 MAPK8IP2Q13387 824 aaPredicted RBP15.86■□□□□ 0.13
USP47-207ENST00000527733 NNTQ13423 1086 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 PAN2Q504Q3 1202 aaKnown RBP15.86■□□□□ 0.13
USP47-207ENST00000527733 SNF8Q96H20 258 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 SLITRK1Q96PX8 696 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 FSD1LQ9BXM9 530 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 LACRTQ9GZZ8 138 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 ABI2Q9NYB9 513 aaPredicted RBP15.86■□□□□ 0.13
USP47-207ENST00000527733 KANSL3Q9P2N6 904 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 TLK1Q9UKI8 766 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 PRKAR2AP13861 404 aaKnown RBP15.86■□□□□ 0.13
USP47-207ENST00000527733 CBWD6Q4V339 395 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 BOLA3Q53S33 107 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 CBWD3Q5JTY5 395 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 CBWD5Q5RIA9 395 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 ABRAQ8N0Z2 381 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 RILPQ96NA2 401 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 TTC25Q96NG3 672 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 LRRC1Q9BTT6 524 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 STRCP1A6NGW2 1772 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 BCAT1P54687 386 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 TBX2Q13207 712 aaPredicted RBP15.86■□□□□ 0.13
USP47-207ENST00000527733 NAA30Q147X3 362 aaPredicted RBP15.86■□□□□ 0.13
USP47-207ENST00000527733 PCBP1Q15365 356 aaKnown RBP eCLIP15.86■□□□□ 0.13
USP47-207ENST00000527733 MTHFD1LQ6UB35 978 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 NDUFAF2Q8N183 169 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 SLC20A1Q8WUM9 679 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 DDX50Q9BQ39 737 aaKnown RBP15.86■□□□□ 0.13
USP47-207ENST00000527733 RSAD1Q9HA92 442 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 SP110Q9HB58 689 aa15.86■□□□□ 0.13
USP47-207ENST00000527733 ACO1P21399 889 aaKnown RBP15.85■□□□□ 0.13
USP47-207ENST00000527733 IFNAR2P48551 515 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 PTENP60484 403 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 KIAA1755Q5JYT7 1200 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 SLC7A14Q8TBB6 771 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 KLHL14Q9P2G3 628 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 RBPJLQ9UBG7 517 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 BARX2Q9UMQ3 279 aaPredicted RBP15.85■□□□□ 0.13
USP47-207ENST00000527733 NOVA2Q9UNW9 492 aaKnown RBP15.85■□□□□ 0.13
USP47-207ENST00000527733 FNDC3AQ9Y2H6 1198 aaKnown RBP15.85■□□□□ 0.13
USP47-207ENST00000527733 MROH7Q68CQ1 1323 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 PHF20L1A8MW92 1017 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 GOLGA8MH3BSY2 632 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 PHF2O75151 1096 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 RAP1GAPP47736 663 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 ARSEP51690 589 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 IZUMO3Q5VZ72 239 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 SYDE1Q6ZW31 735 aaPredicted RBP15.85■□□□□ 0.13
USP47-207ENST00000527733 PID1Q7Z2X4 250 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 SIAH1Q8IUQ4 282 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 MSL3Q8N5Y2 521 aaKnown RBP15.85■□□□□ 0.13
USP47-207ENST00000527733 EPC1Q9H2F5 836 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 BFARQ9NZS9 450 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 PLAAQ9Y263 795 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 FAN1Q9Y2M0 1017 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 MX2P20592 715 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 NCKAP1LP55160 1127 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 PPP3CAQ08209 521 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 ADCY1Q08828 1119 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 CCDC62Q6P9F0 684 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 ARHGEF19Q8IW93 802 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 BCAS4Q8TDM0 211 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 PACSIN1Q9BY11 444 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 DUSP10Q9Y6W6 482 aa15.85■□□□□ 0.13
USP47-207ENST00000527733 SOWAHBA6NEL2 793 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 ZBTB22O15209 634 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 NCAM1P13591 858 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 RRM1P23921 792 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 GKAP1Q5VSY0 366 aaPredicted RBP15.84■□□□□ 0.13
USP47-207ENST00000527733 KCTD10Q9H3F6 313 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 ZNF112Q9UJU3 913 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 IQANK1A0A1B0GTG1 560 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 KRT37O76014 449 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 BIRC2Q13490 618 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 JADE1Q6IE81 842 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 CACNA2D3Q8IZS8 1091 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 ZNF606Q8WXB4 792 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 CASTOR2A6NHX0 329 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 C2CD6Q53TS8 623 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 KIAA0319LQ8IZA0 1049 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 MICALL1Q8N3F8 863 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 DEPDC1BQ8WUY9 529 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.84■□□□□ 0.13
USP47-207ENST00000527733 SIK3Q9Y2K2 1263 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 H7C4K7 107 aa15.84■□□□□ 0.13
USP47-207ENST00000527733 RECQL4O94761 1208 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms