RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 PITPNM2Q9BZ72 1349 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 CD163L1Q9NR16 1453 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 MYH7BA7E2Y1 1941 aa6.13□□□□□ -1.43
CD44-225ENST00000527326 LINC00854A0A1B0GVQ3 168 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 CFAP69A5D8W1 941 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 ZSCAN5CA6NGD5 496 aaPredicted RBP6.12□□□□□ -1.43
CD44-225ENST00000527326 H7C1D1 291 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 CHL1O00533 1208 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 SLC22A1O15245 554 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 RNMTO43148 476 aaKnown RBP6.12□□□□□ -1.43
CD44-225ENST00000527326 ADCY6O43306 1168 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 B4GALT4O60513 344 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 ICMTO60725 284 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 FKBP6O75344 327 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 B3GALNT1O75752 331 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 TSPAN9O75954 239 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 CLPTM1O96005 669 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 POLR3DP05423 398 aaPredicted RBP6.12□□□□□ -1.43
CD44-225ENST00000527326 ENO2P09104 434 aaPredicted RBP6.12□□□□□ -1.43
CD44-225ENST00000527326 RARGP13631 454 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 CTRB1P17538 263 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 TARSP26639 723 aaKnown RBP6.12□□□□□ -1.43
CD44-225ENST00000527326 MZF1P28698 734 aaPredicted RBP6.12□□□□□ -1.43
CD44-225ENST00000527326 HNRNPH3P31942 346 aaKnown RBP6.12□□□□□ -1.43
CD44-225ENST00000527326 UBA7P41226 1012 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 CHRNA4P43681 627 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 IFNAR2P48551 515 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 DNM2P50570 870 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 B2MP61769 119 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 EXOSC10Q01780 885 aaKnown RBP6.12□□□□□ -1.43
CD44-225ENST00000527326 TAGLNQ01995 201 aaKnown RBP6.12□□□□□ -1.43
CD44-225ENST00000527326 COX10Q12887 443 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 STRN3Q13033 797 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 CDC16Q13042 620 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 PRKG1Q13976 671 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 KRT81Q14533 505 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 COG2Q14746 738 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 INSCQ1MX18 579 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 RGS21Q2M5E4 152 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 RABL6Q3YEC7 729 aaPredicted RBP6.12□□□□□ -1.43
CD44-225ENST00000527326 ANKRD20A4Q4UJ75 823 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 VWA3BQ502W6 1294 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 ACSBG2Q5FVE4 666 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 KLHDC7AQ5VTJ3 777 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 C1orf53Q5VUE5 145 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 BTBD8Q5XKL5 378 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 CTRB2Q6GPI1 263 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 ARHGEF18Q6ZSZ5 1173 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 FASTKD5Q7L8L6 764 aaKnown RBP6.12□□□□□ -1.43
CD44-225ENST00000527326 PDSS2Q86YH6 399 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 KBTBD2Q8IY47 623 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 SAMD14Q8IZD0 417 aaPredicted RBP6.12□□□□□ -1.43
CD44-225ENST00000527326 ELMOD1Q8N336 334 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 LZTR1Q8N653 840 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 LINC00469Q8N7U9 141 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 ATP6V0D2Q8N8Y2 350 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 TERB1Q8NA31 727 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 MINDY2Q8NBR6 621 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 PDZD8Q8NEN9 1154 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 ZNF398Q8TD17 642 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 ACTRT1Q8TDG2 376 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 DLG5Q8TDM6 1919 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 GTF3C2Q8WUA4 911 aaPredicted RBP6.12□□□□□ -1.43
CD44-225ENST00000527326 CHPT1Q8WUD6 406 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 TMA16Q96EY4 203 aaKnown RBP6.12□□□□□ -1.43
CD44-225ENST00000527326 COG3Q96JB2 828 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 MAGEB18Q96M61 343 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 CFAP57Q96MR6 1250 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 NEUROD6Q96NK8 337 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 BTBD9Q96Q07 612 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 MAP3K14Q99558 947 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 SLC30A3Q99726 388 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 ERP44Q9BS26 406 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 MKNK1Q9BUB5 465 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 WNK3Q9BYP7 1800 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 KIAA1683Q9H0B3 1180 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 ZMYND12Q9H0C1 365 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 PABPC3Q9H361 631 aaKnown RBP6.12□□□□□ -1.43
CD44-225ENST00000527326 EHD1Q9H4M9 534 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 PHAXQ9H814 394 aaKnown RBP6.12□□□□□ -1.43
CD44-225ENST00000527326 MLXIPQ9HAP2 919 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 CD209Q9NNX6 404 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 CCDC177Q9NQR7 707 aaPredicted RBP6.12□□□□□ -1.43
CD44-225ENST00000527326 THAP1Q9NVV9 213 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 TAB2Q9NYJ8 693 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 EHD2Q9NZN4 543 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 ASAP1Q9ULH1 1129 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 TMCC3Q9ULS5 477 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 EXOC7Q9UPT5 735 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 APOBEC2Q9Y235 224 aaKnown RBP6.12□□□□□ -1.43
CD44-225ENST00000527326 B3GNT3Q9Y2A9 372 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 DNAJC16Q9Y2G8 782 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 ANGPTL3Q9Y5C1 460 aa6.12□□□□□ -1.43
CD44-225ENST00000527326 UBR1Q8IWV7 1749 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 GAKO14976 1311 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 ARPC4-TTLL3A0A0A6YYG9 625 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 GOLGA8QA0A0J9YX86 632 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 GOLGA8OA6NCC3 632 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 SNTNA6NMZ2 147 aa6.11□□□□□ -1.43
CD44-225ENST00000527326 GOLGA8NF8WBI6 632 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms