RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 AFF4Q9UHB7 1163 aaKnown RBP4.34□□□□□ -1.71
CLNS1A-208ENST00000527265 CPA4Q9UI42 421 aa4.34□□□□□ -1.71
CLNS1A-208ENST00000527265 NUDT5Q9UKK9 219 aa4.34□□□□□ -1.71
CLNS1A-208ENST00000527265 MAN2B2Q9Y2E5 1009 aa4.34□□□□□ -1.71
CLNS1A-208ENST00000527265 PCDHB4Q9Y5E5 795 aa4.34□□□□□ -1.71
CLNS1A-208ENST00000527265 PCDHA13Q9Y5I0 950 aa4.34□□□□□ -1.71
CLNS1A-208ENST00000527265 SNX5Q9Y5X3 404 aa4.34□□□□□ -1.71
CLNS1A-208ENST00000527265 CDY2AQ9Y6F7 541 aa4.34□□□□□ -1.71
CLNS1A-208ENST00000527265 NUMBLQ9Y6R0 609 aa4.34□□□□□ -1.71
CLNS1A-208ENST00000527265 PABPN1LA6NDY0 278 aaKnown RBP4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 MASP2O00187 686 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 HNRNPDLO14979 420 aaKnown RBP4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 RTN3O95197 1032 aaPredicted RBP4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 C4BPAP04003 597 aaKnown RBP4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 SLC3A2P08195 630 aaKnown RBP4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 JUPP14923 745 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 EN2P19622 333 aaPredicted RBP4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 LMO1P25800 156 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 MCAMP43121 646 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 PAPOLAP51003 745 aaKnown RBP4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 EPHA5P54756 1037 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 CASP6P55212 293 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 PLIN5Q00G26 463 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 PPARAQ07869 468 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 SMAD4Q13485 552 aaKnown RBP4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 EFR3AQ14156 821 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 ERV3-1Q14264 604 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 MYBPC3Q14896 1274 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 MUM1L1Q5H9M0 696 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 C3orf38Q5JPI3 329 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 HECTD3Q5T447 861 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 TIGD7Q6NT04 549 aaPredicted RBP4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 FBXO38Q6PIJ6 1188 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 UNQ6494/PRO21346Q6UXR6 183 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 HEATR3Q7Z4Q2 680 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 MILR1Q7Z6M3 343 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 TRMT2AQ8IZ69 625 aaKnown RBP4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 SH2D3CQ8N5H7 860 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 TSPYL6Q8N831 410 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 CYP2W1Q8TAV3 490 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 PHOSPHO1Q8TCT1 267 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 ADAMTS15Q8TE58 950 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 SSH3Q8TE77 659 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 CPA5Q8WXQ8 436 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 FATE1Q969F0 183 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 TIGD1Q96MW7 591 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 TUBGCP5Q96RT8 1024 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 PDCD2LQ9BRP1 358 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 ADI1Q9BV57 179 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 PCDH18Q9HCL0 1135 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 TM7SF3Q9NS93 570 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 KRT84Q9NSB2 600 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 TMEM160Q9NX00 188 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 IGSF9Q9P2J2 1179 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 ASH2LQ9UBL3 628 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 PRSS50Q9UI38 385 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 SCOCQ9UIL1 159 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 ZNF112Q9UJU3 913 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 VPS28Q9UK41 221 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 ARHGAP26Q9UNA1 814 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 SCAF8Q9UPN6 1271 aaKnown RBP4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 TELO2Q9Y4R8 837 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 PCDHA3Q9Y5H8 950 aa4.33□□□□□ -1.72
CLNS1A-208ENST00000527265 TCRBV5S2A0A599 114 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 PI4KAP2A4QPH2 592 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 PRAMEF25A6NGN4 478 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 FAM90A27PA6NNH2 459 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 FAM155BO75949 473 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 URI1O94763 535 aaPredicted RBP4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 STARD3NLO95772 234 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 A1BGP04217 495 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 MMEP08473 750 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 ITGA5P08648 1049 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 FAM200BP0CF97 657 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 RARBP10826 455 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 MTHFD1P11586 935 aaKnown RBP4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 MYL4P12829 197 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 TYRP14679 529 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 ALOX15P16050 662 aaPredicted RBP4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 PTPN1P18031 435 aaKnown RBP4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 ALOX12P18054 663 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 RPL13P26373 211 aaKnown RBP4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 GJA4P35212 333 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 ACTN2P35609 894 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 STAT5AP42229 794 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 POLD2P49005 469 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 CCR5P51681 352 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 SEC24CP53992 1094 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 NANOS3P60323 173 aaKnown RBP4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 RPS16P62249 146 aaKnown RBP4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 VAMP2P63027 116 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 GRIN1Q05586 938 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 RAB30Q15771 203 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 SMAD1Q15797 465 aaKnown RBP4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 TSTQ16762 297 aaKnown RBP4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 TTC38Q5R3I4 469 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 PRAMEF9Q5VWM5 478 aa4.32□□□□□ -1.72
CLNS1A-208ENST00000527265 KIAA1841Q6NSI8 718 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms