RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 CALB1P05937 261 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 ELNP15502 786 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 MMP8P22894 467 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 TNFRSF8P28908 595 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 CCND3P30281 292 aaPredicted RBP17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 RAD23BP54727 409 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 C2CD6Q53TS8 623 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 ALKAL1Q6UXT8 129 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 PHLDB2Q86SQ0 1253 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 TFAP2BQ92481 460 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 RNPC3Q96LT9 517 aaKnown RBP17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 TSPAN18Q96SJ8 248 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 SDCBP2Q9H190 292 aa17.22■□□□□ 0.35
SNRNP35-204ENST00000527158 CCDC188H7C350 402 aa17.21■□□□□ 0.35
SNRNP35-204ENST00000527158 TLR3O15455 904 aaKnown RBP17.21■□□□□ 0.35
SNRNP35-204ENST00000527158 RNF40O75150 1001 aa17.21■□□□□ 0.35
SNRNP35-204ENST00000527158 CILPO75339 1184 aa17.21■□□□□ 0.35
SNRNP35-204ENST00000527158 ASGR1P07306 291 aa17.21■□□□□ 0.35
SNRNP35-204ENST00000527158 AKAP5P24588 427 aa17.21■□□□□ 0.35
SNRNP35-204ENST00000527158 SLC1A1P43005 524 aa17.21■□□□□ 0.35
SNRNP35-204ENST00000527158 ZBTB6Q15916 424 aa17.21■□□□□ 0.35
SNRNP35-204ENST00000527158 KCNA10Q16322 511 aa17.21■□□□□ 0.35
SNRNP35-204ENST00000527158 GDF6Q6KF10 455 aaPredicted RBP17.21■□□□□ 0.35
SNRNP35-204ENST00000527158 ALG3Q92685 438 aa17.21■□□□□ 0.35
SNRNP35-204ENST00000527158 TMEM176AQ96HP8 235 aa17.21■□□□□ 0.35
SNRNP35-204ENST00000527158 ZMAT2Q96NC0 199 aaKnown RBP17.21■□□□□ 0.35
SNRNP35-204ENST00000527158 KRT12Q99456 494 aa17.21■□□□□ 0.35
SNRNP35-204ENST00000527158 PARVAQ9NVD7 372 aa17.21■□□□□ 0.35
SNRNP35-204ENST00000527158 PARP2Q9UGN5 583 aa17.21■□□□□ 0.35
SNRNP35-204ENST00000527158 SRRDQ9UH36 339 aa17.21■□□□□ 0.35
SNRNP35-204ENST00000527158 TRPV2Q9Y5S1 764 aa17.21■□□□□ 0.35
SNRNP35-204ENST00000527158 A6NNZ2 444 aa17.21■□□□□ 0.34
SNRNP35-204ENST00000527158 TRPA1O75762 1119 aa17.21■□□□□ 0.34
SNRNP35-204ENST00000527158 FGGP02679 453 aa17.21■□□□□ 0.34
SNRNP35-204ENST00000527158 GYS2P54840 703 aa17.21■□□□□ 0.34
SNRNP35-204ENST00000527158 CAP1Q01518 475 aa17.21■□□□□ 0.34
SNRNP35-204ENST00000527158 MAMLD1Q13495 774 aa17.21■□□□□ 0.34
SNRNP35-204ENST00000527158 TUBB8Q3ZCM7 444 aa17.21■□□□□ 0.34
SNRNP35-204ENST00000527158 DCAF12L1Q5VU92 463 aa17.21■□□□□ 0.34
SNRNP35-204ENST00000527158 C1orf131Q8NDD1 294 aaKnown RBP17.21■□□□□ 0.34
SNRNP35-204ENST00000527158 CD101Q93033 1021 aa17.21■□□□□ 0.34
SNRNP35-204ENST00000527158 CFHR5Q9BXR6 569 aa17.21■□□□□ 0.34
SNRNP35-204ENST00000527158 AP1M1Q9BXS5 423 aa17.21■□□□□ 0.34
SNRNP35-204ENST00000527158 FAM204AQ9H8W3 233 aa17.21■□□□□ 0.34
SNRNP35-204ENST00000527158 STIM2Q9P246 746 aa17.21■□□□□ 0.34
SNRNP35-204ENST00000527158 UBQLN1Q9UMX0 589 aaKnown RBP17.21■□□□□ 0.34
SNRNP35-204ENST00000527158 PCDHA3Q9Y5H8 950 aa17.21■□□□□ 0.34
SNRNP35-204ENST00000527158 CDY2AQ9Y6F7 541 aa17.21■□□□□ 0.34
SNRNP35-204ENST00000527158 XPOTO43592 962 aaKnown RBP17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 ZMYND10O75800 440 aa17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 SYF2O95926 243 aaKnown RBP17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 ATF7P17544 494 aaPredicted RBP17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 CTNNA2P26232 953 aa17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 CDH5P33151 784 aaPredicted RBP17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 CTNNA1P35221 906 aaKnown RBP17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 PTP4A2Q12974 167 aa17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 UBXN11Q5T124 520 aa17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 TWF2Q6IBS0 349 aaKnown RBP17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 PLEKHA7Q6IQ23 1121 aa17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 KLHL7Q8IXQ5 586 aa17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 PCSK9Q8NBP7 692 aaKnown RBP17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 SLC4A11Q8NBS3 891 aa17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 AENQ8WTP8 325 aaKnown RBP17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 HDAC7Q8WUI4 952 aa17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 KRT35Q92764 455 aa17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 LHX5Q9H2C1 402 aa17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 DMGDHQ9UI17 866 aaKnown RBP17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 BARX2Q9UMQ3 279 aaPredicted RBP17.2■□□□□ 0.34
SNRNP35-204ENST00000527158 CD4P01730 458 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 PEX5P50542 639 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 SLC7A5Q01650 507 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 PTPN11Q06124 597 aaPredicted RBP17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 ZNF211Q13398 564 aaPredicted RBP17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 NNTQ13423 1086 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 EMBQ6PCB8 327 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 SERINC5Q86VE9 423 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 FAM228AQ86W67 206 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 ERICH1Q86X53 443 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 LRRC52Q8N7C0 313 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 KLHDC9Q8NEP7 349 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 WHAMMQ8TF30 809 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 CXCL16Q9H2A7 254 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 CITO14578 2027 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 TRIP12Q14669 1992 aaPredicted RBP17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 HMGCRP04035 888 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 CST5P28325 142 aaPredicted RBP17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 RWDD2BP57060 319 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 INCA1Q0VD86 236 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 GLRA4Q5JXX5 417 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 SEL1L2Q5TEA6 688 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 LLGL2Q6P1M3 1020 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 SESTD1Q86VW0 696 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 FEZF2Q8TBJ5 459 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 CD99L2Q8TCZ2 262 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 C18orf25Q96B23 403 aaPredicted RBP17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 HEXIM2Q96MH2 286 aaKnown RBP17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 PLVAPQ9BX97 442 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 ELOVL4Q9GZR5 314 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 TUBGCP4Q9UGJ1 667 aa17.19■□□□□ 0.34
SNRNP35-204ENST00000527158 KIAA1257Q9ULG3 409 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 239.7 ms