RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 ENOX2Q16206 610 aaKnown RBP17.48■□□□□ 0.39
PTPRU-210ENST00000527027 ARHGAP15Q53QZ3 475 aa17.48■□□□□ 0.39
PTPRU-210ENST00000527027 GPR158Q5T848 1215 aa17.48■□□□□ 0.39
PTPRU-210ENST00000527027 SPATA1Q5VX52 437 aa17.48■□□□□ 0.39
PTPRU-210ENST00000527027 HEATR6Q6AI08 1181 aaKnown RBP17.48■□□□□ 0.39
PTPRU-210ENST00000527027 PRR23CQ6ZRP0 262 aa17.48■□□□□ 0.39
PTPRU-210ENST00000527027 SYNPOQ8N3V7 929 aa17.48■□□□□ 0.39
PTPRU-210ENST00000527027 TTC9BQ8N6N2 239 aa17.48■□□□□ 0.39
PTPRU-210ENST00000527027 ZFYVE19Q96K21 471 aa17.48■□□□□ 0.39
PTPRU-210ENST00000527027 GTSE1Q9NYZ3 720 aa17.48■□□□□ 0.39
PTPRU-210ENST00000527027 PPEF2O14830 753 aa17.47■□□□□ 0.39
PTPRU-210ENST00000527027 FAM189A1O60320 539 aa17.47■□□□□ 0.39
PTPRU-210ENST00000527027 SOAT2O75908 522 aa17.47■□□□□ 0.39
PTPRU-210ENST00000527027 ODC1P11926 461 aa17.47■□□□□ 0.39
PTPRU-210ENST00000527027 TUFMP49411 452 aaKnown RBP17.47■□□□□ 0.39
PTPRU-210ENST00000527027 PLCB2Q00722 1185 aa17.47■□□□□ 0.39
PTPRU-210ENST00000527027 CACNB1Q02641 598 aaPredicted RBP17.47■□□□□ 0.39
PTPRU-210ENST00000527027 CCINQ13939 588 aa17.47■□□□□ 0.39
PTPRU-210ENST00000527027 PON2Q15165 354 aa17.47■□□□□ 0.39
PTPRU-210ENST00000527027 RILPL1Q5EBL4 403 aa17.47■□□□□ 0.39
PTPRU-210ENST00000527027 ARSHQ5FYA8 562 aa17.47■□□□□ 0.39
PTPRU-210ENST00000527027 PPM1JQ5JR12 505 aa17.47■□□□□ 0.39
PTPRU-210ENST00000527027 CD302Q8IX05 232 aa17.47■□□□□ 0.39
PTPRU-210ENST00000527027 BPIFB1Q8TDL5 484 aa17.47■□□□□ 0.39
PTPRU-210ENST00000527027 CDK5RAP3Q96JB5 506 aa17.47■□□□□ 0.39
PTPRU-210ENST00000527027 TMEM209Q96SK2 561 aa17.47■□□□□ 0.39
PTPRU-210ENST00000527027 TASP1Q9H6P5 420 aa17.47■□□□□ 0.39
PTPRU-210ENST00000527027 C2orf42Q9NWW7 574 aa17.47■□□□□ 0.39
PTPRU-210ENST00000527027 TBX20Q9UMR3 447 aa17.47■□□□□ 0.39
PTPRU-210ENST00000527027 HNRNPDLO14979 420 aaKnown RBP17.46■□□□□ 0.39
PTPRU-210ENST00000527027 PIGRP01833 764 aa17.46■□□□□ 0.39
PTPRU-210ENST00000527027 SCP2P22307 547 aa17.46■□□□□ 0.39
PTPRU-210ENST00000527027 CEP68Q76N32 757 aa17.46■□□□□ 0.39
PTPRU-210ENST00000527027 WDR5BQ86VZ2 330 aa17.46■□□□□ 0.39
PTPRU-210ENST00000527027 FAM160A2Q8N612 972 aaPredicted RBP17.46■□□□□ 0.39
PTPRU-210ENST00000527027 FAM212AQ96EL1 285 aa17.46■□□□□ 0.39
PTPRU-210ENST00000527027 THG1LQ9NWX6 298 aaKnown RBP17.46■□□□□ 0.39
PTPRU-210ENST00000527027 ODF2LQ9ULJ1 636 aa17.46■□□□□ 0.39
PTPRU-210ENST00000527027 A0A0B4J269 797 aa17.45■□□□□ 0.38
PTPRU-210ENST00000527027 VWA3AA6NCI4 1184 aa17.45■□□□□ 0.38
PTPRU-210ENST00000527027 GDF9O60383 454 aa17.45■□□□□ 0.38
PTPRU-210ENST00000527027 PRAMEF12O95522 483 aa17.45■□□□□ 0.38
PTPRU-210ENST00000527027 CYP11A1P05108 521 aa17.45■□□□□ 0.38
PTPRU-210ENST00000527027 TNK2Q07912 1038 aa17.45■□□□□ 0.38
PTPRU-210ENST00000527027 VEPH1Q14D04 833 aa17.45■□□□□ 0.38
PTPRU-210ENST00000527027 ITPRIPL2Q3MIP1 535 aa17.45■□□□□ 0.38
PTPRU-210ENST00000527027 TMEM119Q4V9L6 283 aa17.45■□□□□ 0.38
PTPRU-210ENST00000527027 SLC39A12Q504Y0 691 aa17.45■□□□□ 0.38
PTPRU-210ENST00000527027 C9orf57Q5W0N0 161 aa17.45■□□□□ 0.38
PTPRU-210ENST00000527027 MCTP1Q6DN14 999 aa17.45■□□□□ 0.38
PTPRU-210ENST00000527027 JADE1Q6IE81 842 aa17.45■□□□□ 0.38
PTPRU-210ENST00000527027 OR10T2Q8NGX3 314 aa17.45■□□□□ 0.38
PTPRU-210ENST00000527027 SEPT5Q99719 369 aaPredicted RBP17.45■□□□□ 0.38
PTPRU-210ENST00000527027 MSTO1Q9BUK6 570 aa17.45■□□□□ 0.38
PTPRU-210ENST00000527027 PPP4R2Q9NY27 417 aa17.45■□□□□ 0.38
PTPRU-210ENST00000527027 CPSF3Q9UKF6 684 aaKnown RBP17.45■□□□□ 0.38
PTPRU-210ENST00000527027 ANO9A1A5B4 782 aa17.44■□□□□ 0.38
PTPRU-210ENST00000527027 PIRO00625 290 aa17.44■□□□□ 0.38
PTPRU-210ENST00000527027 CDC25CP30307 473 aa17.44■□□□□ 0.38
PTPRU-210ENST00000527027 CYP4F8P98187 520 aa17.44■□□□□ 0.38
PTPRU-210ENST00000527027 PTPAQ15257 358 aa17.44■□□□□ 0.38
PTPRU-210ENST00000527027 MGAT5BQ3V5L5 792 aa17.44■□□□□ 0.38
PTPRU-210ENST00000527027 MYCT1Q8N699 235 aa17.44■□□□□ 0.38
PTPRU-210ENST00000527027 DDX1Q92499 740 aaKnown RBP17.44■□□□□ 0.38
PTPRU-210ENST00000527027 GCNAQ96QF7 691 aa17.44■□□□□ 0.38
PTPRU-210ENST00000527027 LPIN3Q9BQK8 851 aa17.44■□□□□ 0.38
PTPRU-210ENST00000527027 REEP2Q9BRK0 252 aa17.44■□□□□ 0.38
PTPRU-210ENST00000527027 SLC46A2Q9BY10 475 aa17.44■□□□□ 0.38
PTPRU-210ENST00000527027 ZCWPW1Q9H0M4 648 aa17.44■□□□□ 0.38
PTPRU-210ENST00000527027 IL21Q9HBE4 155 aa17.44■□□□□ 0.38
PTPRU-210ENST00000527027 GKN1Q9NS71 199 aa17.44■□□□□ 0.38
PTPRU-210ENST00000527027 DSEQ9UL01 958 aa17.44■□□□□ 0.38
PTPRU-210ENST00000527027 DERAQ9Y315 318 aa17.44■□□□□ 0.38
PTPRU-210ENST00000527027 PDCD11Q14690 1871 aaKnown RBP17.44■□□□□ 0.38
PTPRU-210ENST00000527027 NFICP08651 508 aa17.43■□□□□ 0.38
PTPRU-210ENST00000527027 HOXC13P31276 330 aa17.43■□□□□ 0.38
PTPRU-210ENST00000527027 MCM2P49736 904 aa17.43■□□□□ 0.38
PTPRU-210ENST00000527027 TMEM132DQ14C87 1099 aa17.43■□□□□ 0.38
PTPRU-210ENST00000527027 TAF12Q16514 161 aa17.43■□□□□ 0.38
PTPRU-210ENST00000527027 ARL6IP4Q66PJ3 421 aaKnown RBP17.43■□□□□ 0.38
PTPRU-210ENST00000527027 GPBP1Q86WP2 473 aa17.43■□□□□ 0.38
PTPRU-210ENST00000527027 METTL23Q86XA0 190 aa17.43■□□□□ 0.38
PTPRU-210ENST00000527027 THEM5Q8N1Q8 247 aa17.43■□□□□ 0.38
PTPRU-210ENST00000527027 ZMYM5Q9UJ78 669 aa17.43■□□□□ 0.38
PTPRU-210ENST00000527027 KIF3AQ9Y496 699 aa17.43■□□□□ 0.38
PTPRU-210ENST00000527027 CCDC163A0A0D9SF12 145 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 K7ENM7 598 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 AXIN1O15169 862 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 SLC26A4O43511 780 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 EXTL3O43909 919 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 TRAK2O60296 914 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 FAM13AO94988 1023 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 ATF6P18850 670 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 CDR1P51861 262 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 ZNF131P52739 623 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 SMARCB1Q12824 385 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 SLC39A4Q6P5W5 647 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 CMTM8Q8IZV2 173 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 GIPC2Q8TF65 315 aa17.42■□□□□ 0.38
PTPRU-210ENST00000527027 C2orf15Q8WU43 125 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms