RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 SRGNP10124 158 aa5.96□□□□□ -1.46
CD44-223ENST00000526553 HTR1BP28222 390 aa5.96□□□□□ -1.46
CD44-223ENST00000526553 PHKA1P46020 1223 aa5.96□□□□□ -1.46
CD44-223ENST00000526553 MC2RQ01718 297 aa5.96□□□□□ -1.46
CD44-223ENST00000526553 FPGSQ05932 587 aa5.96□□□□□ -1.46
CD44-223ENST00000526553 FOXI1Q12951 378 aa5.96□□□□□ -1.46
CD44-223ENST00000526553 MINDY4Q4G0A6 757 aa5.96□□□□□ -1.46
CD44-223ENST00000526553 PREPLQ4J6C6 727 aaPredicted RBP5.96□□□□□ -1.46
CD44-223ENST00000526553 Q6ZNX1 250 aa5.96□□□□□ -1.46
CD44-223ENST00000526553 MICALCLQ6ZW33 695 aa5.96□□□□□ -1.46
CD44-223ENST00000526553 ADGRG5Q8IZF4 528 aa5.96□□□□□ -1.46
CD44-223ENST00000526553 SLC44A3Q8N4M1 653 aa5.96□□□□□ -1.46
CD44-223ENST00000526553 NSUN7Q8NE18 718 aaKnown RBP5.96□□□□□ -1.46
CD44-223ENST00000526553 SNX19Q92543 992 aa5.96□□□□□ -1.46
CD44-223ENST00000526553 LRFN3Q9BTN0 628 aa5.96□□□□□ -1.46
CD44-223ENST00000526553 RSAD1Q9HA92 442 aa5.96□□□□□ -1.46
CD44-223ENST00000526553 NOB1Q9ULX3 412 aaKnown RBP5.96□□□□□ -1.46
CD44-223ENST00000526553 G3BP2Q9UN86 482 aaKnown RBP5.96□□□□□ -1.46
CD44-223ENST00000526553 AGAP1Q9UPQ3 857 aa5.96□□□□□ -1.46
CD44-223ENST00000526553 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.96□□□□□ -1.46
CD44-223ENST00000526553 SPATA31A3Q5VYP0 1347 aa5.96□□□□□ -1.46
CD44-223ENST00000526553 ERC2O15083 957 aa5.95□□□□□ -1.46
CD44-223ENST00000526553 PPM1GO15355 546 aaPredicted RBP5.95□□□□□ -1.46
CD44-223ENST00000526553 PRPF3O43395 683 aaKnown RBP5.95□□□□□ -1.46
CD44-223ENST00000526553 PROM1O43490 865 aa5.95□□□□□ -1.46
CD44-223ENST00000526553 TYRP1P17643 537 aa5.95□□□□□ -1.46
CD44-223ENST00000526553 MPLP40238 635 aa5.95□□□□□ -1.46
CD44-223ENST00000526553 SOX8P57073 446 aa5.95□□□□□ -1.46
CD44-223ENST00000526553 EXOSC9Q06265 439 aaKnown RBP5.95□□□□□ -1.46
CD44-223ENST00000526553 FGL2Q14314 439 aa5.95□□□□□ -1.46
CD44-223ENST00000526553 CD300EQ496F6 205 aaPredicted RBP5.95□□□□□ -1.46
CD44-223ENST00000526553 DAAM2Q86T65 1068 aa5.95□□□□□ -1.46
CD44-223ENST00000526553 USP37Q86T82 979 aa5.95□□□□□ -1.46
CD44-223ENST00000526553 ZBTB34Q8NCN2 500 aa5.95□□□□□ -1.46
CD44-223ENST00000526553 PPP1R35Q8TAP8 253 aa5.95□□□□□ -1.46
CD44-223ENST00000526553 AIFM2Q9BRQ8 373 aa5.95□□□□□ -1.46
CD44-223ENST00000526553 CTNND1O60716 968 aaKnown RBP5.94□□□□□ -1.46
CD44-223ENST00000526553 TUSC2O75896 110 aa5.94□□□□□ -1.46
CD44-223ENST00000526553 KIF20AO95235 890 aa5.94□□□□□ -1.46
CD44-223ENST00000526553 LMNAP02545 664 aaKnown RBP5.94□□□□□ -1.46
CD44-223ENST00000526553 ADRA1BP35368 520 aa5.94□□□□□ -1.46
CD44-223ENST00000526553 NPTX2P47972 431 aa5.94□□□□□ -1.46
CD44-223ENST00000526553 AGFG1P52594 562 aaKnown RBP5.94□□□□□ -1.46
CD44-223ENST00000526553 MLC1Q15049 377 aa5.94□□□□□ -1.46
CD44-223ENST00000526553 SF3B3Q15393 1217 aaKnown RBP5.94□□□□□ -1.46
CD44-223ENST00000526553 ANO6Q4KMQ2 910 aa5.94□□□□□ -1.46
CD44-223ENST00000526553 KHDC1LQ5JSQ8 128 aa5.94□□□□□ -1.46
CD44-223ENST00000526553 OVCH2Q7RTZ1 564 aa5.94□□□□□ -1.46
CD44-223ENST00000526553 PSD4Q8NDX1 1056 aa5.94□□□□□ -1.46
CD44-223ENST00000526553 ARMT1Q9H993 441 aa5.94□□□□□ -1.46
CD44-223ENST00000526553 METTL14Q9HCE5 456 aaKnown RBP5.94□□□□□ -1.46
CD44-223ENST00000526553 CNNM1Q9NRU3 951 aa5.94□□□□□ -1.46
CD44-223ENST00000526553 C1orf112Q9NSG2 853 aa5.94□□□□□ -1.46
CD44-223ENST00000526553 MRPS18AQ9NVS2 196 aaKnown RBP5.94□□□□□ -1.46
CD44-223ENST00000526553 MED16Q9Y2X0 877 aa5.94□□□□□ -1.46
CD44-223ENST00000526553 FAM227AF5H4B4 570 aa5.93□□□□□ -1.46
CD44-223ENST00000526553 M0QYG6 137 aa5.93□□□□□ -1.46
CD44-223ENST00000526553 PIM1P11309 404 aaPredicted RBP5.93□□□□□ -1.46
CD44-223ENST00000526553 HDCP19113 662 aa5.93□□□□□ -1.46
CD44-223ENST00000526553 GATA3P23771 443 aa5.93□□□□□ -1.46
CD44-223ENST00000526553 INHBEP58166 350 aa5.93□□□□□ -1.46
CD44-223ENST00000526553 FAM160B1Q5W0V3 765 aa5.93□□□□□ -1.46
CD44-223ENST00000526553 TAF2Q6P1X5 1199 aa5.93□□□□□ -1.46
CD44-223ENST00000526553 VWA1Q6PCB0 445 aa5.93□□□□□ -1.46
CD44-223ENST00000526553 MRGPRX1Q96LB2 322 aa5.93□□□□□ -1.46
CD44-223ENST00000526553 TMEM60Q9H2L4 133 aa5.93□□□□□ -1.46
CD44-223ENST00000526553 KLHL42Q9P2K6 505 aa5.93□□□□□ -1.46
CD44-223ENST00000526553 PCDHA6Q9UN73 950 aa5.93□□□□□ -1.46
CD44-223ENST00000526553 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.93□□□□□ -1.46
CD44-223ENST00000526553 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.92□□□□□ -1.46
CD44-223ENST00000526553 PEX1O43933 1283 aa5.92□□□□□ -1.46
CD44-223ENST00000526553 DNAJB5O75953 348 aa5.92□□□□□ -1.46
CD44-223ENST00000526553 NDUFV1P49821 464 aa5.92□□□□□ -1.46
CD44-223ENST00000526553 TOB1P50616 345 aaPredicted RBP5.92□□□□□ -1.46
CD44-223ENST00000526553 GPSM2P81274 684 aa5.92□□□□□ -1.46
CD44-223ENST00000526553 KRTAP15-1Q3LI76 137 aa5.92□□□□□ -1.46
CD44-223ENST00000526553 KIAA0895LQ68EN5 471 aa5.92□□□□□ -1.46
CD44-223ENST00000526553 NPNTQ6UXI9 565 aa5.92□□□□□ -1.46
CD44-223ENST00000526553 SLC30A10Q6XR72 485 aa5.92□□□□□ -1.46
CD44-223ENST00000526553 FAM9AQ8IZU1 332 aaPredicted RBP5.92□□□□□ -1.46
CD44-223ENST00000526553 MYO1HQ8N1T3 1032 aa5.92□□□□□ -1.46
CD44-223ENST00000526553 CELF5Q8N6W0 485 aaKnown RBP5.92□□□□□ -1.46
CD44-223ENST00000526553 FAM46DQ8NEK8 389 aa5.92□□□□□ -1.46
CD44-223ENST00000526553 GPR150Q8NGU9 434 aa5.92□□□□□ -1.46
CD44-223ENST00000526553 SLC30A5Q8TAD4 765 aa5.92□□□□□ -1.46
CD44-223ENST00000526553 OSBPL9Q96SU4 736 aa5.92□□□□□ -1.46
CD44-223ENST00000526553 HEPHQ9BQS7 1158 aa5.92□□□□□ -1.46
CD44-223ENST00000526553 B3GNT5Q9BYG0 378 aa5.92□□□□□ -1.46
CD44-223ENST00000526553 PIH1D1Q9NWS0 290 aaKnown RBP5.92□□□□□ -1.46
CD44-223ENST00000526553 STAP2Q9UGK3 403 aa5.92□□□□□ -1.46
CD44-223ENST00000526553 PLEKHM1Q9Y4G2 1056 aa5.92□□□□□ -1.46
CD44-223ENST00000526553 A0A0B4J269 797 aa5.91□□□□□ -1.46
CD44-223ENST00000526553 GOLGA6CA6NDK9 693 aa5.91□□□□□ -1.46
CD44-223ENST00000526553 GOLGA6BA6NDN3 693 aa5.91□□□□□ -1.46
CD44-223ENST00000526553 YY2O15391 372 aa5.91□□□□□ -1.46
CD44-223ENST00000526553 TRIAP1O43715 76 aa5.91□□□□□ -1.46
CD44-223ENST00000526553 GOLGA6DP0CG33 693 aa5.91□□□□□ -1.46
CD44-223ENST00000526553 ITGALP20701 1170 aa5.91□□□□□ -1.46
CD44-223ENST00000526553 FOLR3P41439 243 aa5.91□□□□□ -1.46
CD44-223ENST00000526553 KCNJ5P48544 419 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms