RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 NRP1O14786 923 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 MUSKO15146 869 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 CIAO1O76071 339 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 LTA4HP09960 611 aaKnown RBP5.37□□□□□ -1.55
USP48-211ENST00000526044 DPEP1P16444 411 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 ACO1P21399 889 aaKnown RBP5.37□□□□□ -1.55
USP48-211ENST00000526044 CHRNA5P30532 468 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 IL15P40933 162 aaPredicted RBP5.37□□□□□ -1.55
USP48-211ENST00000526044 GPR3P46089 330 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 ERVK-21P61565 698 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 CDK17Q00537 523 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 MEF2AQ02078 507 aaPredicted RBP5.37□□□□□ -1.55
USP48-211ENST00000526044 KRTAP1-1Q07627 177 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 PRKD1Q15139 912 aaPredicted RBP5.37□□□□□ -1.55
USP48-211ENST00000526044 PWP2Q15269 919 aaKnown RBP5.37□□□□□ -1.55
USP48-211ENST00000526044 UBE3CQ15386 1083 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 LRRC24Q50LG9 513 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 MAMDC4Q6UXC1 1216 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 CENPQQ7L2Z9 268 aaPredicted RBP5.37□□□□□ -1.55
USP48-211ENST00000526044 ERC1Q8IUD2 1116 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 CNTD1Q8N815 330 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 AUTS2Q8WXX7 1259 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 CELF1Q92879 486 aaKnown RBP5.37□□□□□ -1.55
USP48-211ENST00000526044 ADOQ96SZ5 270 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 MENTQ9BUN1 341 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 PUS3Q9BZE2 481 aaKnown RBP5.37□□□□□ -1.55
USP48-211ENST00000526044 ANKRD2Q9GZV1 360 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 QRSL1Q9H0R6 528 aaKnown RBP5.37□□□□□ -1.55
USP48-211ENST00000526044 EXOC6BQ9Y2D4 811 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 TSC22D4Q9Y3Q8 395 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 TESMINQ9Y4I5 508 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 COL4A3BPQ9Y5P4 624 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 RIC1Q4ADV7 1423 aa5.37□□□□□ -1.55
USP48-211ENST00000526044 KCNA3P22001 575 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 GUCY2FP51841 1108 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 WNT3AP56704 352 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 KLF1Q13351 362 aaPredicted RBP5.36□□□□□ -1.55
USP48-211ENST00000526044 MUM1Q2TAK8 710 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 C19orf54Q5BKX5 351 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 TOR2AQ5JU69 321 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 METTL24Q5JXM2 366 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 USP51Q70EK9 711 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 ATG9AQ7Z3C6 839 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 KCNK18Q7Z418 384 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 SGMS1Q86VZ5 419 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 SMC5Q8IY18 1101 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 ARL8AQ96BM9 186 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 KIF1BPQ96EK5 621 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 SYT17Q9BSW7 474 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 MRIQ9BWK5 157 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 LRRCC1Q9C099 1032 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 PCDH12Q9NPG4 1184 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 DNAJC28Q9NX36 388 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 BCCIPQ9P287 314 aaKnown RBP eCLIP5.36□□□□□ -1.55
USP48-211ENST00000526044 SH3BP1Q9Y3L3 701 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 ATP6V0A2Q9Y487 856 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 MROH5Q6ZUA9 1318 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 KIF13BQ9NQT8 1826 aa5.36□□□□□ -1.55
USP48-211ENST00000526044 SPEF2Q9C093 1822 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 TNRC6CQ9HCJ0 1690 aaKnown RBP5.35□□□□□ -1.55
USP48-211ENST00000526044 C10orf71Q711Q0 1435 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 ALG1L2C9J202 215 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 PRAMEF4O60810 478 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 TAF5LO75529 589 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 PDE8BO95263 885 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 C6P13671 934 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 HIBADHP31937 336 aaKnown RBP5.35□□□□□ -1.55
USP48-211ENST00000526044 CDKN1CP49918 316 aaPredicted RBP5.35□□□□□ -1.55
USP48-211ENST00000526044 TIMM10P62072 90 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 NUCB1Q02818 461 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 CHRNDQ07001 517 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 TFCP2Q12800 502 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 CDSNQ15517 529 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 PTPROQ16827 1216 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 ANO4Q32M45 955 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 FKBP15Q5T1M5 1219 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 MFSD5Q6N075 450 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 CHD1LQ86WJ1 897 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 PALM2Q8IXS6 379 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 ANKRD35Q8N283 1001 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 CLASRPQ8N2M8 674 aaKnown RBP5.35□□□□□ -1.55
USP48-211ENST00000526044 MSL3Q8N5Y2 521 aaKnown RBP5.35□□□□□ -1.55
USP48-211ENST00000526044 PRPF38AQ8NAV1 312 aaKnown RBP5.35□□□□□ -1.55
USP48-211ENST00000526044 OR5M3Q8NGP4 307 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 SNX33Q8WV41 574 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 FATE1Q969F0 183 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 NEUROD6Q96NK8 337 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 TRIM8Q9BZR9 551 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 BRINP2Q9C0B6 783 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 IFT122Q9HBG6 1241 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 IL1RAPL2Q9NP60 686 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 GPR108Q9NPR9 543 aa5.35□□□□□ -1.55
USP48-211ENST00000526044 CACNA1SQ13698 1873 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 SLX4Q8IY92 1834 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 XDHP47989 1333 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 RPTORQ8N122 1335 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 IFIT2P09913 472 aaKnown RBP5.34□□□□□ -1.55
USP48-211ENST00000526044 GYPEP15421 78 aa5.34□□□□□ -1.55
USP48-211ENST00000526044 IBSPP21815 317 aaPredicted RBP5.34□□□□□ -1.55
USP48-211ENST00000526044 CTSSP25774 331 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms