RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 PROM1O43490 865 aa5.18□□□□□ -1.58
CD44-217ENST00000525348 AP1G1O43747 822 aa5.18□□□□□ -1.58
CD44-217ENST00000525348 VPS4BO75351 444 aa5.18□□□□□ -1.58
CD44-217ENST00000525348 ELFN1P0C7U0 828 aa5.18□□□□□ -1.58
CD44-217ENST00000525348 PPP3CBP16298 524 aa5.18□□□□□ -1.58
CD44-217ENST00000525348 HDCP19113 662 aa5.18□□□□□ -1.58
CD44-217ENST00000525348 VCAM1P19320 739 aa5.18□□□□□ -1.58
CD44-217ENST00000525348 FOLR3P41439 243 aa5.18□□□□□ -1.58
CD44-217ENST00000525348 TAP2Q03519 686 aa5.18□□□□□ -1.58
CD44-217ENST00000525348 PLEKHG6Q3KR16 790 aa5.18□□□□□ -1.58
CD44-217ENST00000525348 PSD4Q8NDX1 1056 aa5.18□□□□□ -1.58
CD44-217ENST00000525348 PPP1R35Q8TAP8 253 aa5.18□□□□□ -1.58
CD44-217ENST00000525348 MYCBPAPQ8TBZ2 947 aa5.18□□□□□ -1.58
CD44-217ENST00000525348 NTN5Q8WTR8 489 aaPredicted RBP5.18□□□□□ -1.58
CD44-217ENST00000525348 SNX19Q92543 992 aa5.18□□□□□ -1.58
CD44-217ENST00000525348 KMT5AQ9NQR1 393 aa5.18□□□□□ -1.58
CD44-217ENST00000525348 ANLNQ9NQW6 1124 aa5.18□□□□□ -1.58
CD44-217ENST00000525348 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.18□□□□□ -1.58
CD44-217ENST00000525348 ZDHHC8Q9ULC8 765 aa5.18□□□□□ -1.58
CD44-217ENST00000525348 PNMA8BQ9ULN7 279 aaPredicted RBP5.18□□□□□ -1.58
CD44-217ENST00000525348 VWC2LB2RUY7 222 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 H3BUI4 141 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 M0QYG6 137 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 YY2O15391 372 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 PEX1O43933 1283 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 OFD1O75665 1012 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 NPTX2P47972 431 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 RARRES1P49788 294 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 HLXQ14774 488 aaPredicted RBP5.17□□□□□ -1.58
CD44-217ENST00000525348 PREPLQ4J6C6 727 aaPredicted RBP5.17□□□□□ -1.58
CD44-217ENST00000525348 MICALCLQ6ZW33 695 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 EPM2AIP1Q7L775 607 aaPredicted RBP5.17□□□□□ -1.58
CD44-217ENST00000525348 USP37Q86T82 979 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 COL23A1Q86Y22 540 aaPredicted RBP5.17□□□□□ -1.58
CD44-217ENST00000525348 FAM9AQ8IZU1 332 aaPredicted RBP5.17□□□□□ -1.58
CD44-217ENST00000525348 TFAP2BQ92481 460 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 SLC9A6Q92581 669 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 SLC35A4Q96G79 324 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 FAM167AQ96KS9 214 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 LRGUKQ96M69 825 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 CRAMP1Q96RY5 1269 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 LRFN3Q9BTN0 628 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 CNPPD1Q9BV87 410 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 ARMT1Q9H993 441 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 ZIM2Q9NZV7 527 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 DMTF1Q9Y222 760 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 STXBP5LQ9Y2K9 1186 aa5.17□□□□□ -1.58
CD44-217ENST00000525348 COL11A2P13942 1736 aaPredicted RBP5.17□□□□□ -1.58
CD44-217ENST00000525348 E2F8A0AVK6 867 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 ADM5C9JUS6 153 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 PRPF3O43395 683 aaKnown RBP5.16□□□□□ -1.58
CD44-217ENST00000525348 DNAJB5O75953 348 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 C1QL1O75973 258 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 CHEK2O96017 543 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 CT47B1P0C2W7 299 aaPredicted RBP5.16□□□□□ -1.58
CD44-217ENST00000525348 MYBP10242 640 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 NCLP19338 710 aaKnown RBP5.16□□□□□ -1.58
CD44-217ENST00000525348 MAPK10P53779 464 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 EPHB1P54762 984 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 LRRC41Q15345 812 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 ODR4Q5SWX8 454 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 PEG10Q86TG7 708 aaKnown RBP5.16□□□□□ -1.58
CD44-217ENST00000525348 ZNF575Q86XF7 245 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 ADGRG3Q86Y34 549 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 TOR1AIP2Q8NFQ8 470 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 KLHDC4Q8TBB5 520 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 C1GALT1C1Q96EU7 318 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 AIFM3Q96NN9 605 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 TAAR9Q96RI9 348 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 LRIT1Q9P2V4 623 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 GABBR1Q9UBS5 961 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 STAP2Q9UGK3 403 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 TLK1Q9UKI8 766 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 PCDHA6Q9UN73 950 aa5.16□□□□□ -1.58
CD44-217ENST00000525348 SHROOM4Q9ULL8 1493 aa5.15□□□□□ -1.58
CD44-217ENST00000525348 WDR27A2RRH5 827 aa5.15□□□□□ -1.59
CD44-217ENST00000525348 RFPL1O75677 317 aa5.15□□□□□ -1.59
CD44-217ENST00000525348 RHOP08100 348 aa5.15□□□□□ -1.59
CD44-217ENST00000525348 CHRM2P08172 466 aa5.15□□□□□ -1.59
CD44-217ENST00000525348 NDUFV1P49821 464 aa5.15□□□□□ -1.59
CD44-217ENST00000525348 TXNRD1Q16881 649 aa5.15□□□□□ -1.59
CD44-217ENST00000525348 EMC10Q5UCC4 262 aa5.15□□□□□ -1.59
CD44-217ENST00000525348 STRIP1Q5VSL9 837 aa5.15□□□□□ -1.59
CD44-217ENST00000525348 FAM46DQ8NEK8 389 aa5.15□□□□□ -1.59
CD44-217ENST00000525348 FBXL20Q96IG2 436 aa5.15□□□□□ -1.59
CD44-217ENST00000525348 CDK5RAP3Q96JB5 506 aa5.15□□□□□ -1.59
CD44-217ENST00000525348 NT5C1BQ96P26 610 aa5.15□□□□□ -1.59
CD44-217ENST00000525348 CAMKK2Q96RR4 588 aa5.15□□□□□ -1.59
CD44-217ENST00000525348 RSAD1Q9HA92 442 aa5.15□□□□□ -1.59
CD44-217ENST00000525348 INSL6Q9Y581 213 aa5.15□□□□□ -1.59
CD44-217ENST00000525348 SPATA31A3Q5VYP0 1347 aa5.15□□□□□ -1.59
CD44-217ENST00000525348 ADGRA2Q96PE1 1338 aa5.15□□□□□ -1.59
CD44-217ENST00000525348 A0A0B4J269 797 aa5.14□□□□□ -1.59
CD44-217ENST00000525348 F5H697 171 aa5.14□□□□□ -1.59
CD44-217ENST00000525348 DCLK1O15075 740 aa5.14□□□□□ -1.59
CD44-217ENST00000525348 MPPED1O15442 326 aa5.14□□□□□ -1.59
CD44-217ENST00000525348 UBXN7O94888 489 aa5.14□□□□□ -1.59
CD44-217ENST00000525348 PIM1P11309 404 aaPredicted RBP5.14□□□□□ -1.59
CD44-217ENST00000525348 HTR1BP28222 390 aa5.14□□□□□ -1.59
CD44-217ENST00000525348 ZNF134P52741 427 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms