RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 STARD6P59095 220 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 FAM160A1Q05DH4 1040 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 EHHADHQ08426 723 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 SNW1Q13573 536 aaKnown RBP13.55□□□□□ -0.24
SMCO4-202ENST00000525141 CUL4BQ13620 913 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 MYBPC2Q14324 1141 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 SLC44A4Q53GD3 710 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 FAM78AQ5JUQ0 283 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 OVOS1Q6IE37 1185 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 PHLDB3Q6NSJ2 640 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 TTC9BQ8N6N2 239 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 TIGD1Q96MW7 591 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 BLZF1Q9H2G9 400 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 GDE1Q9NZC3 331 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 MTF2Q9Y483 593 aaPredicted RBP13.55□□□□□ -0.24
SMCO4-202ENST00000525141 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.55□□□□□ -0.24
SMCO4-202ENST00000525141 CACNA1IQ9P0X4 2223 aa13.55□□□□□ -0.24
SMCO4-202ENST00000525141 CYB561D2O14569 222 aa13.54□□□□□ -0.24
SMCO4-202ENST00000525141 LRRN2O75325 713 aa13.54□□□□□ -0.24
SMCO4-202ENST00000525141 ECI2O75521 394 aa13.54□□□□□ -0.24
SMCO4-202ENST00000525141 SOAT2O75908 522 aa13.54□□□□□ -0.24
SMCO4-202ENST00000525141 WSCD1Q658N2 575 aa13.54□□□□□ -0.24
SMCO4-202ENST00000525141 STXBP4Q6ZWJ1 553 aa13.54□□□□□ -0.24
SMCO4-202ENST00000525141 EPM2AIP1Q7L775 607 aaPredicted RBP13.54□□□□□ -0.24
SMCO4-202ENST00000525141 TMC8Q8IU68 726 aa13.54□□□□□ -0.24
SMCO4-202ENST00000525141 CCDC105Q8IYK2 499 aa13.54□□□□□ -0.24
SMCO4-202ENST00000525141 C1orf127Q8N9H9 656 aa13.54□□□□□ -0.24
SMCO4-202ENST00000525141 DTWD2Q8NBA8 298 aa13.54□□□□□ -0.24
SMCO4-202ENST00000525141 ZNF507Q8TCN5 953 aa13.54□□□□□ -0.24
SMCO4-202ENST00000525141 ATOH1Q92858 354 aaPredicted RBP13.54□□□□□ -0.24
SMCO4-202ENST00000525141 ZNF512Q96ME7 567 aaPredicted RBP13.54□□□□□ -0.24
SMCO4-202ENST00000525141 DDX23Q9BUQ8 820 aaKnown RBP13.54□□□□□ -0.24
SMCO4-202ENST00000525141 OXCT2Q9BYC2 517 aaPredicted RBP13.54□□□□□ -0.24
SMCO4-202ENST00000525141 ZCWPW1Q9H0M4 648 aa13.54□□□□□ -0.24
SMCO4-202ENST00000525141 TBC1D17Q9HA65 648 aa13.54□□□□□ -0.24
SMCO4-202ENST00000525141 EXOC7Q9UPT5 735 aa13.54□□□□□ -0.24
SMCO4-202ENST00000525141 MTMR11A4FU01 709 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 KPNA7A9QM74 516 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 TGFB1I1O43294 461 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 KLRC4O43908 158 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 EXTL3O43909 919 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 GADD45BO75293 160 aaPredicted RBP13.53□□□□□ -0.24
SMCO4-202ENST00000525141 IL18RAPO95256 599 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 DCNP07585 359 aaKnown RBP13.53□□□□□ -0.24
SMCO4-202ENST00000525141 CPB1P15086 417 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 PAX3P23760 479 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 PSMD2Q13200 908 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 FZD5Q13467 585 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 MTSS1LQ765P7 747 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 DNAJB7Q7Z6W7 309 aaPredicted RBP13.53□□□□□ -0.24
SMCO4-202ENST00000525141 USP37Q86T82 979 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 BRSK2Q8IWQ3 736 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 ELOA2Q8IYF1 753 aaPredicted RBP13.53□□□□□ -0.24
SMCO4-202ENST00000525141 GRAMD1CQ8IYS0 662 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 SHKBP1Q8TBC3 707 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 PDE11AQ9HCR9 933 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 ZNF334Q9HCZ1 680 aaPredicted RBP13.53□□□□□ -0.24
SMCO4-202ENST00000525141 ARHGEF3Q9NR81 526 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 TMLHEQ9NVH6 421 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 YIPF1Q9Y548 306 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 NCANO14594 1321 aa13.53□□□□□ -0.24
SMCO4-202ENST00000525141 USP34Q70CQ2 3546 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.52□□□□□ -0.25
SMCO4-202ENST00000525141 PROB1E7EW31 1015 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 STK25O00506 426 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 ZNF197O14709 1029 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 EIF3DO15371 548 aaKnown RBP eCLIP13.52□□□□□ -0.25
SMCO4-202ENST00000525141 LDHAP00338 332 aaKnown RBP13.52□□□□□ -0.25
SMCO4-202ENST00000525141 MYL4P12829 197 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 CD72P21854 359 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 VIPR2P41587 438 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 TAF6P49848 677 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 UBE2HP62256 183 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 DPYDQ12882 1025 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 TEAD2Q15562 447 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 FAM26FQ5R3K3 315 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 CYP4A22Q5TCH4 519 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 GAREM2Q75VX8 874 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 PDZD4Q76G19 769 aaPredicted RBP13.52□□□□□ -0.25
SMCO4-202ENST00000525141 NT5DC4Q86YG4 428 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 GPIHBP1Q8IV16 184 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 SYCP3Q8IZU3 236 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 ELSPBP1Q96BH3 223 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 RSPRY1Q96DX4 576 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 ASB16Q96NS5 453 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 LRRC3BQ96PB8 259 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 MKNK1Q9BUB5 465 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 FOXQ1Q9C009 403 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 TMEM206Q9H813 350 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 SIX4Q9UIU6 781 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 AGAP1Q9UPQ3 857 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 SIT1Q9Y3P8 196 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 PTPRJQ12913 1337 aa13.52□□□□□ -0.25
SMCO4-202ENST00000525141 PRPF40AO75400 957 aaKnown RBP13.51□□□□□ -0.25
SMCO4-202ENST00000525141 RPN1P04843 607 aaKnown RBP13.51□□□□□ -0.25
SMCO4-202ENST00000525141 ODC1P11926 461 aa13.51□□□□□ -0.25
SMCO4-202ENST00000525141 TFAMQ00059 246 aaKnown RBP13.51□□□□□ -0.25
SMCO4-202ENST00000525141 SLC39A12Q504Y0 691 aa13.51□□□□□ -0.25
SMCO4-202ENST00000525141 IQCEQ6IPM2 695 aa13.51□□□□□ -0.25
SMCO4-202ENST00000525141 ARMCX5Q6P1M9 558 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms