RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 JAMLQ86YT9 394 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 C1QL4Q86Z23 238 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 CCDC146Q8IYE0 955 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 RCBTB1Q8NDN9 531 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 SHCBP1Q8NEM2 672 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 PMM1Q92871 262 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 LOXL4Q96JB6 756 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 EXOC2Q96KP1 924 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 MYADMQ96S97 322 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 AARSD1Q9BTE6 412 aaKnown RBP3.84□□□□□ -1.79
CSDE1-209ENST00000525132 SPATA9Q9BWV2 254 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 GEMIN8Q9NWZ8 242 aaKnown RBP3.84□□□□□ -1.79
CSDE1-209ENST00000525132 TCEAL9Q9UHQ7 104 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 MBD1Q9UIS9 605 aaPredicted RBP3.84□□□□□ -1.79
CSDE1-209ENST00000525132 ZNF112Q9UJU3 913 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 PLA2G2DQ9UNK4 145 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 X6R8D5 127 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 PHLPP2Q6ZVD8 1323 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 SDK1Q7Z5N4 2213 aa3.84□□□□□ -1.79
CSDE1-209ENST00000525132 UBR2Q8IWV8 1755 aa3.84□□□□□ -1.8
CSDE1-209ENST00000525132 MIA3Q5JRA6 1907 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 KIAA1109Q2LD37 5005 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 KANSL1LA0AUZ9 987 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 SLC15A5A6NIM6 579 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 CPP00450 1065 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 PABPC1P11940 636 aaKnown RBP3.83□□□□□ -1.8
CSDE1-209ENST00000525132 ITGB6P18564 788 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 PAMP19021 973 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 IGFBP6P24592 240 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-209ENST00000525132 CNR2P34972 360 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 RFC2P35250 354 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 RAP1GAPP47736 663 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 SEPHS1P49903 392 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 SSRP1Q08945 709 aaKnown RBP3.83□□□□□ -1.8
CSDE1-209ENST00000525132 CCDC173Q0VFZ6 552 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 MLANAQ16655 118 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 PLEKHN1Q494U1 663 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-209ENST00000525132 WDR78Q5VTH9 848 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 KIAA1614Q5VZ46 1190 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 OLFML2BQ68BL8 750 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 RPTNQ6XPR3 784 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 CPNE8Q86YQ8 564 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 RIOX2Q8IUF8 465 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 KSR1Q8IVT5 923 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 SMC5Q8IY18 1101 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 LRRC47Q8N1G4 583 aaKnown RBP3.83□□□□□ -1.8
CSDE1-209ENST00000525132 SYNPOQ8N3V7 929 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 CERS5Q8N5B7 392 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 NUP43Q8NFH3 380 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 DNERQ8NFT8 737 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 LURAP1Q96LR2 239 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 TEX13AQ9BXU3 409 aaPredicted RBP3.83□□□□□ -1.8
CSDE1-209ENST00000525132 EPB41L4BQ9H329 900 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 TLE6Q9H808 572 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.83□□□□□ -1.85e-7■■■■■ 27.2
CSDE1-209ENST00000525132 ATP8A1Q9Y2Q0 1164 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 MROH7-TTC4A0A0A0MT08 1334 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 SYNRGQ9UMZ2 1314 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 PTPRBP23467 1997 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 DOCK8Q8NF50 2099 aa3.83□□□□□ -1.8
CSDE1-209ENST00000525132 HERC2O95714 4834 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 ZNF469Q96JG9 3925 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-209ENST00000525132 TET1Q8NFU7 2136 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 NPHP3-ACAD11A0A0J9YXS1 232 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 ARHGAP10A1A4S6 786 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 OR14I1A6ND48 311 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 C5orf67F2Z3F1 127 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 PRC1O43663 620 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 SEMA7AO75326 666 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 CYBBP04839 570 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 SNRPB2P08579 225 aaKnown RBP3.82□□□□□ -1.8
CSDE1-209ENST00000525132 FAM153BP0C7A2 387 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 FTH1P19P0C7X4 201 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 LCP1P13796 627 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 VIPR1P32241 457 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 MAPKAPK2P49137 400 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 CDKN1CP49918 316 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-209ENST00000525132 TBX4P57082 545 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 SEMG2Q02383 582 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 HSP90AA2PQ14568 343 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-209ENST00000525132 SLC14A2Q15849 920 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 PLEKHO1Q53GL0 409 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-209ENST00000525132 BRDTQ58F21 947 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-209ENST00000525132 ZNF648Q5T619 568 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-209ENST00000525132 IQCEQ6IPM2 695 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 RSPO2Q6UXX9 243 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-209ENST00000525132 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.82□□□□□ -1.81e-9■■□□□ 13.9
CSDE1-209ENST00000525132 MCEMP1Q8IX19 187 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 NAT16Q8N8M0 369 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 NETO2Q8NC67 525 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 FBXO15Q8NCQ5 510 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-209ENST00000525132 TSPAN17Q96FV3 270 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 COG3Q96JB2 828 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 FAM84AQ96KN4 292 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 C11orf84Q9BUA3 381 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-209ENST00000525132 CNTD2Q9H8S5 307 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 EPB41L4AQ9HCS5 686 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-209ENST00000525132 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-209ENST00000525132 PLAAQ9Y263 795 aa3.82□□□□□ -1.8
CSDE1-209ENST00000525132 WNK1Q9H4A3 2382 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms