RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 TTC9BQ8N6N2 239 aa20■□□□□ 0.79
CAPN1-203ENST00000525013 LEMD2Q8NC56 503 aa20■□□□□ 0.79
CAPN1-203ENST00000525013 LEO1Q8WVC0 666 aaPredicted RBP20■□□□□ 0.79
CAPN1-203ENST00000525013 BORCS6Q96GS4 357 aa20■□□□□ 0.79
CAPN1-203ENST00000525013 CHAMP1Q96JM3 812 aa20■□□□□ 0.79
CAPN1-203ENST00000525013 SPATA32Q96LK8 384 aa20■□□□□ 0.79
CAPN1-203ENST00000525013 RTP3Q9BQQ7 232 aa20■□□□□ 0.79
CAPN1-203ENST00000525013 MTMR12Q9C0I1 747 aa20■□□□□ 0.79
CAPN1-203ENST00000525013 TBC1D17Q9HA65 648 aa20■□□□□ 0.79
CAPN1-203ENST00000525013 SLC39A2Q9NP94 309 aa20■□□□□ 0.79
CAPN1-203ENST00000525013 ITGA11Q9UKX5 1188 aa20■□□□□ 0.79
CAPN1-203ENST00000525013 ZDHHC9Q9Y397 364 aa20■□□□□ 0.79
CAPN1-203ENST00000525013 H0Y858 1186 aa19.99■□□□□ 0.79
CAPN1-203ENST00000525013 SOAT2O75908 522 aa19.99■□□□□ 0.79
CAPN1-203ENST00000525013 MICAL2O94851 1124 aa19.99■□□□□ 0.79
CAPN1-203ENST00000525013 GJA1P17302 382 aa19.99■□□□□ 0.79
CAPN1-203ENST00000525013 RBP5P82980 135 aa19.99■□□□□ 0.79
CAPN1-203ENST00000525013 TANGO2Q6ICL3 276 aa19.99■□□□□ 0.79
CAPN1-203ENST00000525013 POTEHQ6S545 545 aa19.99■□□□□ 0.79
CAPN1-203ENST00000525013 FAM200AQ8TCP9 573 aa19.99■□□□□ 0.79
CAPN1-203ENST00000525013 SCFD1Q8WVM8 642 aa19.99■□□□□ 0.79
CAPN1-203ENST00000525013 ATOH1Q92858 354 aaPredicted RBP19.99■□□□□ 0.79
CAPN1-203ENST00000525013 ANKRD36BP1Q96IX9 119 aa19.99■□□□□ 0.79
CAPN1-203ENST00000525013 SEPT5Q99719 369 aaPredicted RBP19.99■□□□□ 0.79
CAPN1-203ENST00000525013 ZCWPW1Q9H0M4 648 aa19.99■□□□□ 0.79
CAPN1-203ENST00000525013 IRF2BPLQ9H1B7 796 aa19.99■□□□□ 0.79
CAPN1-203ENST00000525013 KIAA1586Q9HCI6 787 aa19.99■□□□□ 0.79
CAPN1-203ENST00000525013 A0A1B0GVL5 298 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 PVALEFA0A1B0GWK0 134 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 CLIC2O15247 247 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 TGFB1I1O43294 461 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 HUS1O60921 280 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 ECI2O75521 394 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 SLFN14P0C7P3 912 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 CYP2J2P51589 502 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 EPHA5P54756 1037 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 SURF1Q15526 300 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 FAM78AQ5JUQ0 283 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 HS2ST1Q7LGA3 356 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 RDH13Q8NBN7 331 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 PLA2G2FQ9BZM2 168 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 DNAJC25Q9H1X3 360 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 SLITRK6Q9H5Y7 841 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 AGPAT3Q9NRZ7 376 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 FAM86C1Q9NVL1 165 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 INTS13Q9NVM9 706 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 UBE4BO95155 1302 aa19.98■□□□□ 0.79
CAPN1-203ENST00000525013 NRG2O14511 850 aaPredicted RBP19.97■□□□□ 0.79
CAPN1-203ENST00000525013 ACTN4O43707 911 aaKnown RBP19.97■□□□□ 0.79
CAPN1-203ENST00000525013 TNNC2P02585 160 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 PFKFB1P16118 471 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 CMA1P23946 247 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 TUFMP49411 452 aaKnown RBP19.97■□□□□ 0.79
CAPN1-203ENST00000525013 MRE11P49959 708 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 TSPY1Q01534 308 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 PFKPQ01813 784 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 EHHADHQ08426 723 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 SNW1Q13573 536 aaKnown RBP19.97■□□□□ 0.79
CAPN1-203ENST00000525013 TEAD2Q15562 447 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 MGAT5BQ3V5L5 792 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 SCARA3Q6AZY7 606 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 DNAJB7Q7Z6W7 309 aaPredicted RBP19.97■□□□□ 0.79
CAPN1-203ENST00000525013 LRRTM3Q86VH5 581 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 DCP1BQ8IZD4 617 aaKnown RBP19.97■□□□□ 0.79
CAPN1-203ENST00000525013 PDCL2Q8N4E4 241 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 LRRC52Q8N7C0 313 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 ELSPBP1Q96BH3 223 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 PAGE5Q96GU1 130 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 SHDQ96IW2 340 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 ZSWIM3Q96MP5 696 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 PHOX2BQ99453 314 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 ZFP14Q9HCL3 533 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 ABI2Q9NYB9 513 aaPredicted RBP19.97■□□□□ 0.79
CAPN1-203ENST00000525013 SIX4Q9UIU6 781 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 ASB3Q9Y575 518 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 ATP6V1DQ9Y5K8 247 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 SNX9Q9Y5X1 595 aa19.97■□□□□ 0.79
CAPN1-203ENST00000525013 MIA3Q5JRA6 1907 aa19.96■□□□□ 0.79
CAPN1-203ENST00000525013 MOSPD3O75425 235 aa19.96■□□□□ 0.79
CAPN1-203ENST00000525013 MYO1EQ12965 1108 aa19.96■□□□□ 0.79
CAPN1-203ENST00000525013 TAF12Q16514 161 aa19.96■□□□□ 0.79
CAPN1-203ENST00000525013 SNRNP35Q16560 246 aaKnown RBP19.96■□□□□ 0.79
CAPN1-203ENST00000525013 DUOXA2Q1HG44 320 aa19.96■□□□□ 0.79
CAPN1-203ENST00000525013 PHLDB3Q6NSJ2 640 aa19.96■□□□□ 0.79
CAPN1-203ENST00000525013 ITIH5Q86UX2 942 aa19.96■□□□□ 0.79
CAPN1-203ENST00000525013 XXYLT1Q8NBI6 393 aa19.96■□□□□ 0.79
CAPN1-203ENST00000525013 OR5B17Q8NGF7 314 aa19.96■□□□□ 0.79
CAPN1-203ENST00000525013 SHKBP1Q8TBC3 707 aa19.96■□□□□ 0.79
CAPN1-203ENST00000525013 SMARCD2Q92925 531 aa19.96■□□□□ 0.79
CAPN1-203ENST00000525013 ASB16Q96NS5 453 aa19.96■□□□□ 0.79
CAPN1-203ENST00000525013 EXOC1Q9NV70 894 aa19.96■□□□□ 0.79
CAPN1-203ENST00000525013 HSFX1Q9UBD0 423 aa19.96■□□□□ 0.79
CAPN1-203ENST00000525013 L1RE1Q9UN81 338 aa19.96■□□□□ 0.79
CAPN1-203ENST00000525013 ZFHX2Q9C0A1 2572 aaPredicted RBP19.96■□□□□ 0.79
CAPN1-203ENST00000525013 PTPRJQ12913 1337 aa19.96■□□□□ 0.79
CAPN1-203ENST00000525013 F5P12259 2224 aa19.95■□□□□ 0.78
CAPN1-203ENST00000525013 A0A1W2PRU2 124 aa19.95■□□□□ 0.78
CAPN1-203ENST00000525013 DLATP10515 647 aaKnown RBP19.95■□□□□ 0.78
CAPN1-203ENST00000525013 SNRPFP62306 86 aaKnown RBP19.95■□□□□ 0.78
CAPN1-203ENST00000525013 SMARCB1Q12824 385 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms