RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 WSCD1Q658N2 575 aa22.47■■□□□ 1.19
TRAPPC9-215ENST00000524162 CENPPQ6IPU0 288 aa22.47■■□□□ 1.19
TRAPPC9-215ENST00000524162 GRASPQ7Z6J2 395 aaPredicted RBP22.47■■□□□ 1.19
TRAPPC9-215ENST00000524162 TMC2Q8TDI7 906 aa22.47■■□□□ 1.19
TRAPPC9-215ENST00000524162 RTP3Q9BQQ7 232 aa22.47■■□□□ 1.19
TRAPPC9-215ENST00000524162 ACBD6Q9BR61 282 aa22.47■■□□□ 1.19
TRAPPC9-215ENST00000524162 C11orf16Q9NQ32 467 aa22.47■■□□□ 1.19
TRAPPC9-215ENST00000524162 GABRDO14764 452 aa22.46■■□□□ 1.19
TRAPPC9-215ENST00000524162 KRT19P08727 400 aa22.46■■□□□ 1.19
TRAPPC9-215ENST00000524162 DLATP10515 647 aaKnown RBP22.46■■□□□ 1.19
TRAPPC9-215ENST00000524162 LAMP2P13473 410 aa22.46■■□□□ 1.19
TRAPPC9-215ENST00000524162 ATICP31939 592 aa22.46■■□□□ 1.19
TRAPPC9-215ENST00000524162 LHX1P48742 406 aa22.46■■□□□ 1.19
TRAPPC9-215ENST00000524162 PNOCQ13519 176 aa22.46■■□□□ 1.19
TRAPPC9-215ENST00000524162 MTMR3Q13615 1198 aa22.46■■□□□ 1.19
TRAPPC9-215ENST00000524162 ZCWPW2Q504Y3 356 aa22.46■■□□□ 1.19
TRAPPC9-215ENST00000524162 BMP8AQ7Z5Y6 402 aa22.46■■□□□ 1.19
TRAPPC9-215ENST00000524162 OR10T2Q8NGX3 314 aa22.46■■□□□ 1.19
TRAPPC9-215ENST00000524162 HPDLQ96IR7 371 aa22.46■■□□□ 1.19
TRAPPC9-215ENST00000524162 VRTNQ9H8Y1 702 aa22.46■■□□□ 1.19
TRAPPC9-215ENST00000524162 DNMT3BQ9UBC3 853 aaKnown RBP22.46■■□□□ 1.19
TRAPPC9-215ENST00000524162 FRMD4BQ9Y2L6 1034 aa22.46■■□□□ 1.19
TRAPPC9-215ENST00000524162 ASB3Q9Y575 518 aa22.46■■□□□ 1.19
TRAPPC9-215ENST00000524162 ZNF318Q5VUA4 2279 aa22.46■■□□□ 1.19
TRAPPC9-215ENST00000524162 MTMR11A4FU01 709 aa22.45■■□□□ 1.18
TRAPPC9-215ENST00000524162 KINO60870 393 aaKnown RBP22.45■■□□□ 1.18
TRAPPC9-215ENST00000524162 VNN2O95498 520 aa22.45■■□□□ 1.18
TRAPPC9-215ENST00000524162 EPHA5P54756 1037 aa22.45■■□□□ 1.18
TRAPPC9-215ENST00000524162 PABPC1LQ4VXU2 614 aaKnown RBP22.45■■□□□ 1.18
TRAPPC9-215ENST00000524162 ELMOD1Q8N336 334 aa22.45■■□□□ 1.18
TRAPPC9-215ENST00000524162 PDCL2Q8N4E4 241 aa22.45■■□□□ 1.18
TRAPPC9-215ENST00000524162 SPPL2BQ8TCT7 592 aa22.45■■□□□ 1.18
TRAPPC9-215ENST00000524162 CCDC127Q96BQ5 260 aa22.45■■□□□ 1.18
TRAPPC9-215ENST00000524162 LIMD1Q9UGP4 676 aa22.45■■□□□ 1.18
TRAPPC9-215ENST00000524162 CDH7Q9ULB5 785 aa22.45■■□□□ 1.18
TRAPPC9-215ENST00000524162 L1RE1Q9UN81 338 aa22.45■■□□□ 1.18
TRAPPC9-215ENST00000524162 PCDHA5Q9Y5H7 936 aa22.45■■□□□ 1.18
TRAPPC9-215ENST00000524162 ZNF197O14709 1029 aa22.44■■□□□ 1.18
TRAPPC9-215ENST00000524162 GBP2P32456 591 aaPredicted RBP22.44■■□□□ 1.18
TRAPPC9-215ENST00000524162 PPP1R2P41236 205 aa22.44■■□□□ 1.18
TRAPPC9-215ENST00000524162 TUFMP49411 452 aaKnown RBP22.44■■□□□ 1.18
TRAPPC9-215ENST00000524162 SIGLEC14Q08ET2 396 aa22.44■■□□□ 1.18
TRAPPC9-215ENST00000524162 BFSP1Q12934 665 aa22.44■■□□□ 1.18
TRAPPC9-215ENST00000524162 NFE2Q16621 373 aaPredicted RBP22.44■■□□□ 1.18
TRAPPC9-215ENST00000524162 LMBRD2Q68DH5 695 aaPredicted RBP22.44■■□□□ 1.18
TRAPPC9-215ENST00000524162 IQCEQ6IPM2 695 aa22.44■■□□□ 1.18
TRAPPC9-215ENST00000524162 CLEC17AQ6ZS10 378 aa22.44■■□□□ 1.18
TRAPPC9-215ENST00000524162 TRIM67Q6ZTA4 783 aa22.44■■□□□ 1.18
TRAPPC9-215ENST00000524162 DCP1BQ8IZD4 617 aaKnown RBP22.44■■□□□ 1.18
TRAPPC9-215ENST00000524162 ZNF516Q92618 1163 aa22.44■■□□□ 1.18
TRAPPC9-215ENST00000524162 SMARCE1Q969G3 411 aa22.44■■□□□ 1.18
TRAPPC9-215ENST00000524162 MYADMQ96S97 322 aa22.44■■□□□ 1.18
TRAPPC9-215ENST00000524162 MKNK1Q9BUB5 465 aa22.44■■□□□ 1.18
TRAPPC9-215ENST00000524162 SNX9Q9Y5X1 595 aa22.44■■□□□ 1.18
TRAPPC9-215ENST00000524162 ANHXE9PGG2 379 aa22.43■■□□□ 1.18
TRAPPC9-215ENST00000524162 RHOP08100 348 aa22.43■■□□□ 1.18
TRAPPC9-215ENST00000524162 SP100P23497 879 aaPredicted RBP22.43■■□□□ 1.18
TRAPPC9-215ENST00000524162 NR2F2P24468 414 aa22.43■■□□□ 1.18
TRAPPC9-215ENST00000524162 PCSK1P29120 753 aa22.43■■□□□ 1.18
TRAPPC9-215ENST00000524162 UBE2HP62256 183 aa22.43■■□□□ 1.18
TRAPPC9-215ENST00000524162 MYL7Q01449 175 aa22.43■■□□□ 1.18
TRAPPC9-215ENST00000524162 TSPY1Q01534 308 aa22.43■■□□□ 1.18
TRAPPC9-215ENST00000524162 SOWAHAQ2M3V2 549 aa22.43■■□□□ 1.18
TRAPPC9-215ENST00000524162 FOXR2Q6PJQ5 311 aa22.43■■□□□ 1.18
TRAPPC9-215ENST00000524162 INTS8Q75QN2 995 aaKnown RBP22.43■■□□□ 1.18
TRAPPC9-215ENST00000524162 SYAP1Q96A49 352 aaPredicted RBP22.43■■□□□ 1.18
TRAPPC9-215ENST00000524162 ZNF512Q96ME7 567 aaPredicted RBP22.43■■□□□ 1.18
TRAPPC9-215ENST00000524162 LRFN3Q9BTN0 628 aa22.43■■□□□ 1.18
TRAPPC9-215ENST00000524162 KCNK12Q9HB15 430 aa22.43■■□□□ 1.18
TRAPPC9-215ENST00000524162 ABCB6Q9NP58 842 aa22.43■■□□□ 1.18
TRAPPC9-215ENST00000524162 GDE1Q9NZC3 331 aa22.43■■□□□ 1.18
TRAPPC9-215ENST00000524162 POLIQ9UNA4 740 aa22.43■■□□□ 1.18
TRAPPC9-215ENST00000524162 YIPF1Q9Y548 306 aa22.43■■□□□ 1.18
TRAPPC9-215ENST00000524162 LRRIQ3A6PVS8 624 aaPredicted RBP22.42■■□□□ 1.18
TRAPPC9-215ENST00000524162 TACC1O75410 805 aa22.42■■□□□ 1.18
TRAPPC9-215ENST00000524162 CST3P01034 146 aaPredicted RBP22.42■■□□□ 1.18
TRAPPC9-215ENST00000524162 OR4Q2P0C623 313 aa22.42■■□□□ 1.18
TRAPPC9-215ENST00000524162 DUSP4Q13115 394 aa22.42■■□□□ 1.18
TRAPPC9-215ENST00000524162 TDGQ13569 410 aa22.42■■□□□ 1.18
TRAPPC9-215ENST00000524162 PLEKHO2Q8TD55 490 aa22.42■■□□□ 1.18
TRAPPC9-215ENST00000524162 FGF13Q92913 245 aa22.42■■□□□ 1.18
TRAPPC9-215ENST00000524162 PTPRDP23468 1912 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 DENND4CQ5VZ89 1909 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 C4BPAP04003 597 aaKnown RBP22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 PSMC2P35998 433 aaKnown RBP22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 ALDH1A3P47895 512 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 CASP4P49662 377 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 EPHB3P54753 998 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 TWF1Q12792 350 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 ZACNQ401N2 412 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 SLC39A12Q504Y0 691 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 PRSS36Q5K4E3 855 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 CYP4A22Q5TCH4 519 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 SCARA3Q6AZY7 606 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 MTSS1LQ765P7 747 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 GET4Q7L5D6 327 aaPredicted RBP22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 ADGRF2Q8IZF7 708 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 TAF4BQ92750 862 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 FAM84AQ96KN4 292 aa22.41■■□□□ 1.18
TRAPPC9-215ENST00000524162 TMEM209Q96SK2 561 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms