RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 GPR62Q9BZJ7 368 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 KLHL25Q9H0H3 589 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 GBP3Q9H0R5 595 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 ADAM7Q9H2U9 754 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 NGRNQ9NPE2 291 aaKnown RBP5.85□□□□□ -1.47
PABPC1-223ENST00000523636 PRMT8Q9NR22 394 aaPredicted RBP5.85□□□□□ -1.47
PABPC1-223ENST00000523636 TMEM260Q9NX78 707 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 DENND2AQ9ULE3 1009 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 HDAC5Q9UQL6 1122 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 NEUROG3Q9Y4Z2 214 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 PCDHB12Q9Y5F1 795 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 SNX11Q9Y5W9 270 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 MYH15Q9Y2K3 1946 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 MTORP42345 2549 aa5.85□□□□□ -1.47
PABPC1-223ENST00000523636 DOCK6Q96HP0 2047 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 PRRT4C9JH25 899 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 LAMTOR5O43504 91 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 SUSD5O60279 629 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 ADAM23O75077 832 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 TCEA3O75764 348 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 TP53P04637 393 aaPredicted RBP5.84□□□□□ -1.47
PABPC1-223ENST00000523636 FURINP09958 794 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 SRFP11831 508 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 PLCD1P51178 756 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 CLCN7P51798 805 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 TNK2Q07912 1038 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 SQSTM1Q13501 440 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 IFI16Q16666 785 aaKnown RBP5.84□□□□□ -1.47
PABPC1-223ENST00000523636 ABCB5Q2M3G0 1257 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 CERKLQ49MI3 558 aaPredicted RBP5.84□□□□□ -1.47
PABPC1-223ENST00000523636 DUSP28Q4G0W2 176 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 PRSS36Q5K4E3 855 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 IQSEC1Q6DN90 963 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 SNRNP48Q6IEG0 339 aaKnown RBP5.84□□□□□ -1.47
PABPC1-223ENST00000523636 PCSK4Q6UW60 755 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 SKAP1Q86WV1 359 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 DDX42Q86XP3 938 aaKnown RBP eCLIP5.84□□□□□ -1.47
PABPC1-223ENST00000523636 TTC14Q96N46 770 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 DNAJC7Q99615 494 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 CYP26B1Q9NR63 512 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 WHRNQ9P202 907 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 SUSD2Q9UGT4 822 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 FBXO2Q9UK22 296 aaPredicted RBP5.84□□□□□ -1.47
PABPC1-223ENST00000523636 RWDD3Q9Y3V2 267 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 DAAM1Q9Y4D1 1078 aa5.84□□□□□ -1.47
PABPC1-223ENST00000523636 SPG11Q96JI7 2443 aa5.84□□□□□ -1.48
PABPC1-223ENST00000523636 SPTBN1Q01082 2364 aaKnown RBP5.84□□□□□ -1.48
PABPC1-223ENST00000523636 MYH8P13535 1937 aa5.84□□□□□ -1.48
PABPC1-223ENST00000523636 CSMD2Q7Z408 3487 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 CACNA1DQ01668 2161 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 PDS5AQ29RF7 1337 aaKnown RBP5.83□□□□□ -1.48
PABPC1-223ENST00000523636 A0A1W2PRQ8 180 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 HIDE1A8MVS5 230 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 GRM8O00222 908 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 SIGLEC6O43699 453 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 MAFO75444 373 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-223ENST00000523636 MTA2O94776 668 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 RPN1P04843 607 aaKnown RBP5.83□□□□□ -1.48
PABPC1-223ENST00000523636 EPHX1P07099 455 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 IFIT2P09913 472 aaKnown RBP5.83□□□□□ -1.48
PABPC1-223ENST00000523636 ITGA4P13612 1032 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 ATICP31939 592 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 RAB27AP51159 221 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 NOVA1P51513 510 aaKnown RBP5.83□□□□□ -1.48
PABPC1-223ENST00000523636 RIPPLY3P57055 190 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 IFRD2Q12894 506 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-223ENST00000523636 NKPD1Q17RQ9 610 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 RABL6Q3YEC7 729 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-223ENST00000523636 CCDC30Q5VVM6 783 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 KIAA1841Q6NSI8 718 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 THAP5Q7Z6K1 395 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 SPACA3Q8IXA5 215 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 SMAP1Q8IYB5 467 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-223ENST00000523636 CPXCR1Q8N123 301 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 C12orf76Q8N812 135 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-223ENST00000523636 SYTL5Q8TDW5 730 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-223ENST00000523636 COPS5Q92905 334 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 RCC1LQ96I51 464 aaKnown RBP5.83□□□□□ -1.48
PABPC1-223ENST00000523636 NECTIN4Q96NY8 510 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 CDCA3Q99618 268 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-223ENST00000523636 PRDM14Q9GZV8 571 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 TRIT1Q9H3H1 467 aaKnown RBP5.83□□□□□ -1.48
PABPC1-223ENST00000523636 BICC1Q9H694 974 aaKnown RBP5.83□□□□□ -1.48
PABPC1-223ENST00000523636 LRRC4CQ9HCJ2 640 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 GP6Q9HCN6 339 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 SPATA6Q9NWH7 488 aaPredicted RBP5.83□□□□□ -1.48
PABPC1-223ENST00000523636 ZIM2Q9NZV7 527 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 GTF2A1LQ9UNN4 478 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 ZNF451Q9Y4E5 1061 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 ST14Q9Y5Y6 855 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 FHOD1Q9Y613 1164 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 TSC2P49815 1807 aa5.83□□□□□ -1.48
PABPC1-223ENST00000523636 ALG1L2C9J202 215 aa5.82□□□□□ -1.48
PABPC1-223ENST00000523636 PPM1BO75688 479 aa5.82□□□□□ -1.48
PABPC1-223ENST00000523636 HOXB8P17481 243 aaPredicted RBP5.82□□□□□ -1.48
PABPC1-223ENST00000523636 GRIK1P39086 918 aa5.82□□□□□ -1.48
PABPC1-223ENST00000523636 RFX5P48382 616 aaPredicted RBP5.82□□□□□ -1.48
PABPC1-223ENST00000523636 TDO2P48775 406 aa5.82□□□□□ -1.48
PABPC1-223ENST00000523636 CLK1P49759 484 aaKnown RBP5.82□□□□□ -1.48
PABPC1-223ENST00000523636 STARD6P59095 220 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms