RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 EPHA5P54756 1037 aa18.58■□□□□ 0.56
CCNC-213ENST00000523541 MYO1EQ12965 1108 aa18.58■□□□□ 0.56
CCNC-213ENST00000523541 SNRNP35Q16560 246 aaKnown RBP18.58■□□□□ 0.56
CCNC-213ENST00000523541 ALYREFQ86V81 257 aaKnown RBP18.58■□□□□ 0.56
CCNC-213ENST00000523541 DCP1BQ8IZD4 617 aaKnown RBP18.58■□□□□ 0.56
CCNC-213ENST00000523541 CXorf38Q8TB03 319 aa18.58■□□□□ 0.56
CCNC-213ENST00000523541 ZCWPW1Q9H0M4 648 aa18.58■□□□□ 0.56
CCNC-213ENST00000523541 SLC2A4RGQ9NR83 387 aa18.58■□□□□ 0.56
CCNC-213ENST00000523541 KMT2EQ8IZD2 1858 aa18.57■□□□□ 0.56
CCNC-213ENST00000523541 FGF19O95750 216 aa18.57■□□□□ 0.56
CCNC-213ENST00000523541 CASP1P29466 404 aa18.57■□□□□ 0.56
CCNC-213ENST00000523541 POLR2BP30876 1174 aaKnown RBP18.57■□□□□ 0.56
CCNC-213ENST00000523541 NDUFA8P51970 172 aa18.57■□□□□ 0.56
CCNC-213ENST00000523541 TWF1Q12792 350 aa18.57■□□□□ 0.56
CCNC-213ENST00000523541 DUSP4Q13115 394 aa18.57■□□□□ 0.56
CCNC-213ENST00000523541 PRSS36Q5K4E3 855 aa18.57■□□□□ 0.56
CCNC-213ENST00000523541 PDZD4Q76G19 769 aaPredicted RBP18.57■□□□□ 0.56
CCNC-213ENST00000523541 CBWD2Q8IUF1 395 aa18.57■□□□□ 0.56
CCNC-213ENST00000523541 SLC9A9Q8IVB4 645 aa18.57■□□□□ 0.56
CCNC-213ENST00000523541 NPAS3Q8IXF0 933 aa18.57■□□□□ 0.56
CCNC-213ENST00000523541 TOP6BLQ8N6T0 577 aa18.57■□□□□ 0.56
CCNC-213ENST00000523541 SPPL2BQ8TCT7 592 aa18.57■□□□□ 0.56
CCNC-213ENST00000523541 MCRS1Q96EZ8 462 aa18.57■□□□□ 0.56
CCNC-213ENST00000523541 PGLYRP2Q96PD5 576 aa18.57■□□□□ 0.56
CCNC-213ENST00000523541 FNBP1Q96RU3 617 aa18.57■□□□□ 0.56
CCNC-213ENST00000523541 ACBD6Q9BR61 282 aa18.57■□□□□ 0.56
CCNC-213ENST00000523541 IRF2BPLQ9H1B7 796 aa18.57■□□□□ 0.56
CCNC-213ENST00000523541 ZNF318Q5VUA4 2279 aa18.57■□□□□ 0.56
CCNC-213ENST00000523541 MTMR11A4FU01 709 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 PDXKO00764 312 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 ECI2O75521 394 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 OR4Q2P0C623 313 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 LHX1P48742 406 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 AP3M2P53677 418 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 WNT7BP56706 349 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 STK4Q13043 487 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 PSMD6Q15008 389 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 NFE2Q16621 373 aaPredicted RBP18.56■□□□□ 0.56
CCNC-213ENST00000523541 KMT5BQ4FZB7 885 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 WSCD1Q658N2 575 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 PARM1Q6UWI2 310 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 ITIH5Q86UX2 942 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 NELFCDQ8IXH7 590 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 TMEM105Q8N8V8 129 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 GPR152Q8TDT2 470 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 ATOH1Q92858 354 aaPredicted RBP18.56■□□□□ 0.56
CCNC-213ENST00000523541 FGF14Q92915 247 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 ASAH2Q9NR71 780 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 CEP72Q9P209 647 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 YIPF1Q9Y548 306 aa18.56■□□□□ 0.56
CCNC-213ENST00000523541 WDFY4Q6ZS81 3184 aa18.55■□□□□ 0.56
CCNC-213ENST00000523541 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.55■□□□□ 0.56
CCNC-213ENST00000523541 VNN2O95498 520 aa18.55■□□□□ 0.56
CCNC-213ENST00000523541 KRT19P08727 400 aa18.55■□□□□ 0.56
CCNC-213ENST00000523541 TSPY1Q01534 308 aa18.55■□□□□ 0.56
CCNC-213ENST00000523541 KRBA2Q6ZNG9 492 aa18.55■□□□□ 0.56
CCNC-213ENST00000523541 GRAMD1CQ8IYS0 662 aa18.55■□□□□ 0.56
CCNC-213ENST00000523541 FSIP1Q8NA03 581 aa18.55■□□□□ 0.56
CCNC-213ENST00000523541 OR10T2Q8NGX3 314 aa18.55■□□□□ 0.56
CCNC-213ENST00000523541 KXD1Q9BQD3 176 aa18.55■□□□□ 0.56
CCNC-213ENST00000523541 RTP3Q9BQQ7 232 aa18.55■□□□□ 0.56
CCNC-213ENST00000523541 MTMR12Q9C0I1 747 aa18.55■□□□□ 0.56
CCNC-213ENST00000523541 SIX4Q9UIU6 781 aa18.55■□□□□ 0.56
CCNC-213ENST00000523541 ZDBF2Q9HCK1 2354 aa18.55■□□□□ 0.56
CCNC-213ENST00000523541 H0Y858 1186 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 CLIC2O15247 247 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 EXOC3O60645 756 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 RHOBTB3O94955 611 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 ZNF202O95125 648 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 RPN1P04843 607 aaKnown RBP18.54■□□□□ 0.56
CCNC-213ENST00000523541 MYL4P12829 197 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 TNNI1P19237 187 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 HOXD11P31277 338 aaPredicted RBP18.54■□□□□ 0.56
CCNC-213ENST00000523541 MRE11P49959 708 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 MYL7Q01449 175 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 PFKPQ01813 784 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 CYP24A1Q07973 514 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 KCNB1Q14721 858 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 SLC5A9Q2M3M2 681 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 SLC39A12Q504Y0 691 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 TRAPPC11Q7Z392 1133 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 LIMS2Q7Z4I7 341 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 PDCL2Q8N4E4 241 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 RDH13Q8NBN7 331 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 ATAD1Q8NBU5 361 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 PSMG2Q969U7 264 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 E2F7Q96AV8 911 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 ELSPBP1Q96BH3 223 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 SHDQ96IW2 340 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 FAM86C1Q9NVL1 165 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 DMAC2Q9NW81 257 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 ZMYM5Q9UJ78 669 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 DOCK8Q8NF50 2099 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 ANK1P16157 1881 aa18.54■□□□□ 0.56
CCNC-213ENST00000523541 GOLGA6L4A6NEF3 574 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 GABRDO14764 452 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 GALR2O43603 387 aaPredicted RBP18.53■□□□□ 0.56
CCNC-213ENST00000523541 STAU1O95793 577 aaKnown RBP18.53■□□□□ 0.56
CCNC-213ENST00000523541 CEBPBP17676 345 aa18.53■□□□□ 0.56
CCNC-213ENST00000523541 PCSK1P29120 753 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms