RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 SSC5DA1L4H1 1573 aa8.84□□□□□ -0.99
CSMD1-213ENST00000523488 PDGFRBP09619 1106 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 TROVE2P10155 538 aaKnown RBP eCLIP8.83□□□□□ -1
CSMD1-213ENST00000523488 SLC5A2P31639 672 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 THOC5Q13769 683 aaKnown RBP8.83□□□□□ -1
CSMD1-213ENST00000523488 CCDC137Q6PK04 289 aaKnown RBP8.83□□□□□ -1
CSMD1-213ENST00000523488 ADGRD1Q6QNK2 874 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 KCNK18Q7Z418 384 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 SDR16C5Q8N3Y7 309 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 JADE3Q92613 823 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 ZHX3Q9H4I2 956 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 S100A14Q9HCY8 104 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 DNAJC17Q9NVM6 304 aaKnown RBP8.83□□□□□ -1
CSMD1-213ENST00000523488 NOCTQ9UK39 431 aaKnown RBP8.83□□□□□ -1
CSMD1-213ENST00000523488 MTUS1Q9ULD2 1270 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 FADS3Q9Y5Q0 445 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 NPHP3-ACAD11A0A0J9YXS1 232 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 A6NJR5 290 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 UBAP1LF5GYI3 381 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 MARCH6O60337 910 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 SNNO75324 88 aaPredicted RBP8.83□□□□□ -1
CSMD1-213ENST00000523488 HOXA10P31260 410 aaPredicted RBP8.83□□□□□ -1
CSMD1-213ENST00000523488 CHN2P52757 468 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 HSP90AA5PQ58FG0 334 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 SH3D19Q5HYK7 790 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 GADL1Q6ZQY3 521 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 LINC00299Q6ZSB3 139 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 NLRX1Q86UT6 975 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 KBTBD6Q86V97 674 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 SLF2Q8IX21 1173 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 APBB2Q92870 758 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 FIZ1Q96SL8 496 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 UNC45AQ9H3U1 944 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 OLFML3Q9NRN5 406 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 BMP2KQ9NSY1 1161 aaPredicted RBP8.83□□□□□ -1
CSMD1-213ENST00000523488 ASIC3Q9UHC3 531 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 HTR3EA5X5Y0 456 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 EIF2S1P05198 315 aaKnown RBP8.83□□□□□ -1
CSMD1-213ENST00000523488 MLH1P40692 756 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 CETN2P41208 172 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 PSMD8P48556 350 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 DCTN2Q13561 401 aaKnown RBP8.83□□□□□ -1
CSMD1-213ENST00000523488 SPARCL1Q14515 664 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 TNIP1Q15025 636 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 STXBP5Q5T5C0 1151 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 OLFML1Q6UWY5 402 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 BBOF1Q8ND07 529 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 HAS1Q92839 578 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 PNPLA8Q9NP80 782 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 OSGEPQ9NPF4 335 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 DDX18Q9NVP1 670 aaKnown RBP8.83□□□□□ -1
CSMD1-213ENST00000523488 NDE1Q9NXR1 346 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 BTBD7Q9P203 1132 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 KDM3AQ9Y4C1 1321 aa8.83□□□□□ -1
CSMD1-213ENST00000523488 P4HA2O15460 535 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 TBC1D12O60347 775 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 HAUS5O94927 633 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 ESRRAP11474 423 aaPredicted RBP8.82□□□□□ -1
CSMD1-213ENST00000523488 POLD1P28340 1107 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 CDK9P50750 372 aaKnown RBP8.82□□□□□ -1
CSMD1-213ENST00000523488 CCT8P50990 548 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 TUBA4AP68366 448 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 NOP14P78316 857 aaKnown RBP8.82□□□□□ -1
CSMD1-213ENST00000523488 ASPHQ12797 758 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 MED21Q13503 144 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 RABGAP1LQ5R372 815 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 SEL1L2Q5TEA6 688 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 KLHL35Q6PF15 583 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 C12orf56Q8IXR9 622 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 HGH1Q9BTY7 390 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 EBF3Q9H4W6 596 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 KCNK4Q9NYG8 393 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 DCTN4Q9UJW0 460 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 WASF2Q9Y6W5 498 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 CNTNAP2Q9UHC6 1331 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 COL11A2P13942 1736 aaPredicted RBP8.82□□□□□ -1
CSMD1-213ENST00000523488 KRT15P19012 456 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 CDH2P19022 906 aaPredicted RBP8.82□□□□□ -1
CSMD1-213ENST00000523488 ACAT1P24752 427 aaKnown RBP8.82□□□□□ -1
CSMD1-213ENST00000523488 GALK1P51570 392 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 HDAC4P56524 1084 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 TMED2Q15363 201 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 MAPK6Q16659 721 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 RSPH3Q86UC2 560 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 RASSF3Q86WH2 238 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 CPSF7Q8N684 471 aaKnown RBP8.82□□□□□ -1
CSMD1-213ENST00000523488 SAMD3Q8N6K7 520 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 MIGA1Q8NAN2 632 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 CHPT1Q8WUD6 406 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 PTCD2Q8WV60 388 aaKnown RBP8.82□□□□□ -1
CSMD1-213ENST00000523488 PRPF31Q8WWY3 499 aaKnown RBP8.82□□□□□ -1
CSMD1-213ENST00000523488 ALKBH8Q96BT7 664 aaKnown RBP8.82□□□□□ -1
CSMD1-213ENST00000523488 FAM161BQ96MY7 647 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 NRDE2Q9H7Z3 1164 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 STRIP2Q9ULQ0 834 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 FARP1Q9Y4F1 1045 aaPredicted RBP8.82□□□□□ -1
CSMD1-213ENST00000523488 COL4A4P53420 1690 aaPredicted RBP8.82□□□□□ -1
CSMD1-213ENST00000523488 FOXO6A8MYZ6 492 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 ALOX15BO15296 676 aa8.82□□□□□ -1
CSMD1-213ENST00000523488 GRIN3BO60391 1043 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 186.9 ms